RNA–Protein interactions for RNA: ENST00000485780.1

SHROOM3-207, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-207ENST00000485780 MSRAQ9UJ68 235 aa10.38□□□□□ -0.75
SHROOM3-207ENST00000485780 SLC4A7Q9Y6M7 1214 aa10.38□□□□□ -0.75
SHROOM3-207ENST00000485780 GRXCR1A8MXD5 290 aa10.37□□□□□ -0.75
SHROOM3-207ENST00000485780 E9PMD0 336 aa10.37□□□□□ -0.75
SHROOM3-207ENST00000485780 CKBP12277 381 aa10.37□□□□□ -0.75
SHROOM3-207ENST00000485780 SLC12A3P55017 1021 aa10.37□□□□□ -0.75
SHROOM3-207ENST00000485780 IGBP1P78318 339 aa10.37□□□□□ -0.75
SHROOM3-207ENST00000485780 MGAT3Q09327 533 aa10.37□□□□□ -0.75
SHROOM3-207ENST00000485780 EMC2Q15006 297 aa10.37□□□□□ -0.75
SHROOM3-207ENST00000485780 RAB30Q15771 203 aa10.37□□□□□ -0.75
SHROOM3-207ENST00000485780 XKR9Q5GH70 373 aa10.37□□□□□ -0.75
SHROOM3-207ENST00000485780 RASIP1Q5U651 963 aa10.37□□□□□ -0.75
SHROOM3-207ENST00000485780 CCDC73Q6ZRK6 1079 aa10.37□□□□□ -0.75
SHROOM3-207ENST00000485780 C1orf186Q6ZWK4 172 aa10.37□□□□□ -0.75
SHROOM3-207ENST00000485780 KIAA0319LQ8IZA0 1049 aa10.37□□□□□ -0.75
SHROOM3-207ENST00000485780 ZNF710Q8N1W2 664 aa10.37□□□□□ -0.75
SHROOM3-207ENST00000485780 NME8Q8N427 588 aa10.37□□□□□ -0.75
SHROOM3-207ENST00000485780 SYT2Q8N9I0 419 aaPredicted RBP10.37□□□□□ -0.75
SHROOM3-207ENST00000485780 SLC7A3Q8WY07 619 aa10.37□□□□□ -0.75
SHROOM3-207ENST00000485780 MYLIPQ8WY64 445 aa10.37□□□□□ -0.75
SHROOM3-207ENST00000485780 RAD54LQ92698 747 aa10.37□□□□□ -0.75
SHROOM3-207ENST00000485780 ZBTB10Q96DT7 871 aa10.37□□□□□ -0.75
SHROOM3-207ENST00000485780 CDK5RAP3Q96JB5 506 aa10.37□□□□□ -0.75
SHROOM3-207ENST00000485780 CDX2Q99626 313 aaPredicted RBP10.37□□□□□ -0.75
SHROOM3-207ENST00000485780 SH2D3AQ9BRG2 576 aa10.37□□□□□ -0.75
SHROOM3-207ENST00000485780 TTYH1Q9H313 450 aaPredicted RBP10.37□□□□□ -0.75
SHROOM3-207ENST00000485780 ATP6V0A4Q9HBG4 840 aa10.37□□□□□ -0.75
SHROOM3-207ENST00000485780 KCND2Q9NZV8 630 aa10.37□□□□□ -0.75
SHROOM3-207ENST00000485780 CCDC39Q9UFE4 941 aa10.37□□□□□ -0.75
SHROOM3-207ENST00000485780 DNM3Q9UQ16 869 aa10.37□□□□□ -0.75
SHROOM3-207ENST00000485780 MICAL3Q7RTP6 2002 aa10.36□□□□□ -0.75
SHROOM3-207ENST00000485780 A0A087WWV3 80 aa10.36□□□□□ -0.75
SHROOM3-207ENST00000485780 ARHGEF35A5YM69 484 aa10.36□□□□□ -0.75
SHROOM3-207ENST00000485780 PARNO95453 639 aaKnown RBP10.36□□□□□ -0.75
SHROOM3-207ENST00000485780 IQCF3P0C7M6 154 aa10.36□□□□□ -0.75
SHROOM3-207ENST00000485780 FOSL2P15408 326 aa10.36□□□□□ -0.75
SHROOM3-207ENST00000485780 CYP11B2P19099 503 aa10.36□□□□□ -0.75
SHROOM3-207ENST00000485780 GUCY2CP25092 1073 aa10.36□□□□□ -0.75
SHROOM3-207ENST00000485780 CLCN3P51790 818 aa10.36□□□□□ -0.75
SHROOM3-207ENST00000485780 POLGP54098 1239 aaPredicted RBP10.36□□□□□ -0.75
SHROOM3-207ENST00000485780 DRP2Q13474 957 aa10.36□□□□□ -0.75
SHROOM3-207ENST00000485780 CSPP1Q1MSJ5 1256 aa10.36□□□□□ -0.75
SHROOM3-207ENST00000485780 RINT1Q6NUQ1 792 aa10.36□□□□□ -0.75
SHROOM3-207ENST00000485780 EFCAB12Q6NXP0 572 aa10.36□□□□□ -0.75
SHROOM3-207ENST00000485780 PADI6Q6TGC4 694 aa10.36□□□□□ -0.75
SHROOM3-207ENST00000485780 LRRC8DQ7L1W4 858 aa10.36□□□□□ -0.75
SHROOM3-207ENST00000485780 TRMT1LQ7Z2T5 733 aaKnown RBP10.36□□□□□ -0.75
SHROOM3-207ENST00000485780 MCPH1Q8NEM0 835 aa10.36□□□□□ -0.75
SHROOM3-207ENST00000485780 LARP4BQ92615 738 aaKnown RBP10.36□□□□□ -0.75
SHROOM3-207ENST00000485780 MTRQ99707 1265 aa10.36□□□□□ -0.75
SHROOM3-207ENST00000485780 PYM1Q9BRP8 204 aaKnown RBP10.36□□□□□ -0.75
SHROOM3-207ENST00000485780 TIPINQ9BVW5 301 aa10.36□□□□□ -0.75
SHROOM3-207ENST00000485780 PBX4Q9BYU1 374 aa10.36□□□□□ -0.75
SHROOM3-207ENST00000485780 CUEDC2Q9H467 287 aa10.36□□□□□ -0.75
SHROOM3-207ENST00000485780 ZNF576Q9H609 170 aa10.36□□□□□ -0.75
SHROOM3-207ENST00000485780 MAGEF1Q9HAY2 307 aa10.36□□□□□ -0.75
SHROOM3-207ENST00000485780 FAM13BQ9NYF5 915 aa10.36□□□□□ -0.75
SHROOM3-207ENST00000485780 CXXC1Q9P0U4 656 aaPredicted RBP10.36□□□□□ -0.75
SHROOM3-207ENST00000485780 SQORQ9Y6N5 450 aa10.36□□□□□ -0.75
SHROOM3-207ENST00000485780 EYSQ5T1H1 3165 aa10.35□□□□□ -0.75
SHROOM3-207ENST00000485780 USO1O60763 962 aaKnown RBP10.35□□□□□ -0.75
SHROOM3-207ENST00000485780 GPR32O75388 356 aa10.35□□□□□ -0.75
SHROOM3-207ENST00000485780 PLA2G4BP0C869 781 aa10.35□□□□□ -0.75
SHROOM3-207ENST00000485780 SELPP16109 830 aa10.35□□□□□ -0.75
SHROOM3-207ENST00000485780 PFKFB1P16118 471 aa10.35□□□□□ -0.75
SHROOM3-207ENST00000485780 ATP2A2P16615 1042 aaKnown RBP10.35□□□□□ -0.75
SHROOM3-207ENST00000485780 TMOD1P28289 359 aa10.35□□□□□ -0.75
SHROOM3-207ENST00000485780 ARL2P36404 184 aa10.35□□□□□ -0.75
SHROOM3-207ENST00000485780 PBX2P40425 430 aa10.35□□□□□ -0.75
SHROOM3-207ENST00000485780 MRPS6P82932 125 aaKnown RBP10.35□□□□□ -0.75
SHROOM3-207ENST00000485780 MAPK7Q13164 816 aa10.35□□□□□ -0.75
SHROOM3-207ENST00000485780 MBTPS1Q14703 1052 aa10.35□□□□□ -0.75
SHROOM3-207ENST00000485780 GPNMBQ14956 572 aa10.35□□□□□ -0.75
SHROOM3-207ENST00000485780 ZNF618Q5T7W0 954 aa10.35□□□□□ -0.75
SHROOM3-207ENST00000485780 IER5Q5VY09 327 aa10.35□□□□□ -0.75
SHROOM3-207ENST00000485780 RRAGBQ5VZM2 374 aa10.35□□□□□ -0.75
SHROOM3-207ENST00000485780 CNNM4Q6P4Q7 775 aa10.35□□□□□ -0.75
SHROOM3-207ENST00000485780 RSPH3Q86UC2 560 aa10.35□□□□□ -0.75
SHROOM3-207ENST00000485780 IFNLR1Q8IU57 520 aaPredicted RBP10.35□□□□□ -0.75
SHROOM3-207ENST00000485780 LRRC71Q8N4P6 559 aa10.35□□□□□ -0.75
SHROOM3-207ENST00000485780 DNAJB3Q8WWF6 145 aa10.35□□□□□ -0.75
SHROOM3-207ENST00000485780 TCP11Q8WWU5 503 aa10.35□□□□□ -0.75
SHROOM3-207ENST00000485780 MRPS27Q92552 414 aaKnown RBP10.35□□□□□ -0.75
SHROOM3-207ENST00000485780 KCNN1Q92952 543 aa10.35□□□□□ -0.75
SHROOM3-207ENST00000485780 VWCEQ96DN2 955 aa10.35□□□□□ -0.75
SHROOM3-207ENST00000485780 MAP7D2Q96T17 732 aa10.35□□□□□ -0.75
SHROOM3-207ENST00000485780 RUSC1Q9BVN2 902 aa10.35□□□□□ -0.75
SHROOM3-207ENST00000485780 GOLPH3LQ9H4A5 285 aa10.35□□□□□ -0.75
SHROOM3-207ENST00000485780 RTN4Q9NQC3 1192 aaKnown RBP10.35□□□□□ -0.75
SHROOM3-207ENST00000485780 KBTBD4Q9NVX7 518 aa10.35□□□□□ -0.75
SHROOM3-207ENST00000485780 KCNH3Q9ULD8 1083 aa10.35□□□□□ -0.75
SHROOM3-207ENST00000485780 ACTN4O43707 911 aaKnown RBP10.34□□□□□ -0.75
SHROOM3-207ENST00000485780 CHRNA1P02708 482 aa10.34□□□□□ -0.75
SHROOM3-207ENST00000485780 CXCL10P02778 98 aa10.34□□□□□ -0.75
SHROOM3-207ENST00000485780 THPOP40225 353 aa10.34□□□□□ -0.75
SHROOM3-207ENST00000485780 STAT6P42226 847 aa10.34□□□□□ -0.75
SHROOM3-207ENST00000485780 KCNJ6P48051 423 aa10.34□□□□□ -0.75
SHROOM3-207ENST00000485780 DNM2P50570 870 aa10.34□□□□□ -0.75
SHROOM3-207ENST00000485780 GPC3P51654 580 aa10.34□□□□□ -0.75
SHROOM3-207ENST00000485780 ZNF131P52739 623 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms