RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 MARCH8Q5T0T0 291 aa16.08■□□□□ 0.16
LRIF1-202ENST00000485275 CCSAPQ6IQ19 270 aaPredicted RBP16.08■□□□□ 0.16
LRIF1-202ENST00000485275 TTI2Q6NXR4 508 aa16.08■□□□□ 0.16
LRIF1-202ENST00000485275 MCPH1Q8NEM0 835 aa16.08■□□□□ 0.16
LRIF1-202ENST00000485275 DRC1Q96MC2 740 aa16.08■□□□□ 0.16
LRIF1-202ENST00000485275 TIPINQ9BVW5 301 aa16.08■□□□□ 0.16
LRIF1-202ENST00000485275 MRPL44Q9H9J2 332 aaKnown RBP16.08■□□□□ 0.16
LRIF1-202ENST00000485275 DACH1Q9UI36 760 aa16.08■□□□□ 0.16
LRIF1-202ENST00000485275 IKBKBO14920 756 aa16.07■□□□□ 0.16
LRIF1-202ENST00000485275 PRPF6O94906 941 aaKnown RBP16.07■□□□□ 0.16
LRIF1-202ENST00000485275 ARL2P36404 184 aa16.07■□□□□ 0.16
LRIF1-202ENST00000485275 RFC5P40937 340 aa16.07■□□□□ 0.16
LRIF1-202ENST00000485275 PEX3P56589 373 aa16.07■□□□□ 0.16
LRIF1-202ENST00000485275 TBC1D8BQ0IIM8 1120 aa16.07■□□□□ 0.16
LRIF1-202ENST00000485275 MFSD10Q14728 455 aa16.07■□□□□ 0.16
LRIF1-202ENST00000485275 ZCWPW2Q504Y3 356 aa16.07■□□□□ 0.16
LRIF1-202ENST00000485275 LHX8Q68G74 356 aa16.07■□□□□ 0.16
LRIF1-202ENST00000485275 ZNF720Q7Z2F6 126 aa16.07■□□□□ 0.16
LRIF1-202ENST00000485275 NELFCDQ8IXH7 590 aa16.07■□□□□ 0.16
LRIF1-202ENST00000485275 FAM178BQ8IXR5 827 aa16.07■□□□□ 0.16
LRIF1-202ENST00000485275 LINC01465Q8N7H1 131 aa16.07■□□□□ 0.16
LRIF1-202ENST00000485275 KLHDC9Q8NEP7 349 aa16.07■□□□□ 0.16
LRIF1-202ENST00000485275 ENOX1Q8TC92 643 aaKnown RBP16.07■□□□□ 0.16
LRIF1-202ENST00000485275 SLC7A3Q8WY07 619 aa16.07■□□□□ 0.16
LRIF1-202ENST00000485275 DUSP9Q99956 384 aaKnown RBP16.07■□□□□ 0.16
LRIF1-202ENST00000485275 SEL1LQ9UBV2 794 aa16.07■□□□□ 0.16
LRIF1-202ENST00000485275 RWDD2AQ9UIY3 292 aa16.07■□□□□ 0.16
LRIF1-202ENST00000485275 GCNT3O95395 438 aa16.06■□□□□ 0.16
LRIF1-202ENST00000485275 GJB1P08034 283 aa16.06■□□□□ 0.16
LRIF1-202ENST00000485275 GLRA2P23416 452 aa16.06■□□□□ 0.16
LRIF1-202ENST00000485275 NPTX2P47972 431 aa16.06■□□□□ 0.16
LRIF1-202ENST00000485275 MRE11P49959 708 aa16.06■□□□□ 0.16
LRIF1-202ENST00000485275 NCKAP1LP55160 1127 aa16.06■□□□□ 0.16
LRIF1-202ENST00000485275 GRIK4Q16099 956 aa16.06■□□□□ 0.16
LRIF1-202ENST00000485275 BMT2Q1RMZ1 405 aa16.06■□□□□ 0.16
LRIF1-202ENST00000485275 HSP90AA4PQ58FG1 418 aa16.06■□□□□ 0.16
LRIF1-202ENST00000485275 GNASQ5JWF2 1037 aa16.06■□□□□ 0.16
LRIF1-202ENST00000485275 CXCL17Q6UXB2 119 aa16.06■□□□□ 0.16
LRIF1-202ENST00000485275 MYOCDQ8IZQ8 938 aa16.06■□□□□ 0.16
LRIF1-202ENST00000485275 LMBR1Q8WVP7 490 aa16.06■□□□□ 0.16
LRIF1-202ENST00000485275 KIFAP3Q92845 792 aa16.06■□□□□ 0.16
LRIF1-202ENST00000485275 P2RX5Q93086 422 aa16.06■□□□□ 0.16
LRIF1-202ENST00000485275 KCTD10Q9H3F6 313 aa16.06■□□□□ 0.16
LRIF1-202ENST00000485275 FANCLQ9NW38 375 aa16.06■□□□□ 0.16
LRIF1-202ENST00000485275 NFE2L3Q9Y4A8 694 aa16.06■□□□□ 0.16
LRIF1-202ENST00000485275 K7ENM7 598 aa16.05■□□□□ 0.16
LRIF1-202ENST00000485275 PSMA7O14818 248 aa16.05■□□□□ 0.16
LRIF1-202ENST00000485275 SMIM10L2AP0DMW4 78 aa16.05■□□□□ 0.16
LRIF1-202ENST00000485275 SMIM10L2BP0DMW5 78 aa16.05■□□□□ 0.16
LRIF1-202ENST00000485275 ATP1A3P13637 1013 aa16.05■□□□□ 0.16
LRIF1-202ENST00000485275 PSEN2P49810 448 aa16.05■□□□□ 0.16
LRIF1-202ENST00000485275 CLCN3P51790 818 aa16.05■□□□□ 0.16
LRIF1-202ENST00000485275 CHMP4BP1P59074 171 aa16.05■□□□□ 0.16
LRIF1-202ENST00000485275 PPFIA1Q13136 1202 aa16.05■□□□□ 0.16
LRIF1-202ENST00000485275 CT47A1Q5JQC4 288 aaPredicted RBP16.05■□□□□ 0.16
LRIF1-202ENST00000485275 ANKRD40Q6AI12 368 aa16.05■□□□□ 0.16
LRIF1-202ENST00000485275 CENPPQ6IPU0 288 aa16.05■□□□□ 0.16
LRIF1-202ENST00000485275 EEF2KMTQ96G04 330 aa16.05■□□□□ 0.16
LRIF1-202ENST00000485275 DHTKD1Q96HY7 919 aaPredicted RBP16.05■□□□□ 0.16
LRIF1-202ENST00000485275 SAMSN1Q9NSI8 373 aaKnown RBP16.05■□□□□ 0.16
LRIF1-202ENST00000485275 LARSQ9P2J5 1176 aaKnown RBP16.05■□□□□ 0.16
LRIF1-202ENST00000485275 PPME1Q9Y570 386 aa16.05■□□□□ 0.16
LRIF1-202ENST00000485275 TRIP12Q14669 1992 aaPredicted RBP16.05■□□□□ 0.16
LRIF1-202ENST00000485275 COL1A2P08123 1366 aa16.05■□□□□ 0.16
LRIF1-202ENST00000485275 SLC16A4O15374 487 aa16.05■□□□□ 0.16
LRIF1-202ENST00000485275 CCNE1P24864 410 aa16.05■□□□□ 0.16
LRIF1-202ENST00000485275 CST5P28325 142 aaPredicted RBP16.05■□□□□ 0.16
LRIF1-202ENST00000485275 RTP1P59025 263 aa16.05■□□□□ 0.16
LRIF1-202ENST00000485275 CAPSQ13938 189 aa16.05■□□□□ 0.16
LRIF1-202ENST00000485275 ZNF484Q5JVG2 852 aa16.05■□□□□ 0.16
LRIF1-202ENST00000485275 TAS1R3Q7RTX0 852 aa16.05■□□□□ 0.16
LRIF1-202ENST00000485275 TMEM161BQ8NDZ6 487 aa16.05■□□□□ 0.16
LRIF1-202ENST00000485275 ZNF507Q8TCN5 953 aa16.05■□□□□ 0.16
LRIF1-202ENST00000485275 SETD4Q9NVD3 440 aa16.05■□□□□ 0.16
LRIF1-202ENST00000485275 KAT6AQ92794 2004 aa16.05■□□□□ 0.16
LRIF1-202ENST00000485275 BECN2A8MW95 431 aa16.04■□□□□ 0.16
LRIF1-202ENST00000485275 ZNF18P17022 549 aa16.04■□□□□ 0.16
LRIF1-202ENST00000485275 KLRC1P26715 233 aa16.04■□□□□ 0.16
LRIF1-202ENST00000485275 HOXC8P31273 242 aa16.04■□□□□ 0.16
LRIF1-202ENST00000485275 ADAM17P78536 824 aa16.04■□□□□ 0.16
LRIF1-202ENST00000485275 MTFR1Q15390 333 aa16.04■□□□□ 0.16
LRIF1-202ENST00000485275 SPATA1Q5VX52 437 aa16.04■□□□□ 0.16
LRIF1-202ENST00000485275 MTHFD1LQ6UB35 978 aa16.04■□□□□ 0.16
LRIF1-202ENST00000485275 UNC93B1Q9H1C4 597 aa16.04■□□□□ 0.16
LRIF1-202ENST00000485275 SUGCTQ9HAC7 445 aa16.04■□□□□ 0.16
LRIF1-202ENST00000485275 HMX1Q9NP08 348 aaPredicted RBP16.04■□□□□ 0.16
LRIF1-202ENST00000485275 EIF3DO15371 548 aaKnown RBP eCLIP16.03■□□□□ 0.16
LRIF1-202ENST00000485275 TGFB1I1O43294 461 aa16.03■□□□□ 0.16
LRIF1-202ENST00000485275 ASGR1P07306 291 aa16.03■□□□□ 0.16
LRIF1-202ENST00000485275 DMP1Q13316 513 aaPredicted RBP16.03■□□□□ 0.16
LRIF1-202ENST00000485275 STIM1Q13586 685 aa16.03■□□□□ 0.16
LRIF1-202ENST00000485275 KCNA10Q16322 511 aa16.03■□□□□ 0.16
LRIF1-202ENST00000485275 BRDTQ58F21 947 aaPredicted RBP16.03■□□□□ 0.16
LRIF1-202ENST00000485275 EFCAB12Q6NXP0 572 aa16.03■□□□□ 0.16
LRIF1-202ENST00000485275 HAUS6Q7Z4H7 955 aa16.03■□□□□ 0.16
LRIF1-202ENST00000485275 IRF2BP1Q8IU81 584 aa16.03■□□□□ 0.16
LRIF1-202ENST00000485275 SPIRE2Q8WWL2 714 aa16.03■□□□□ 0.16
LRIF1-202ENST00000485275 PRPF31Q8WWY3 499 aaKnown RBP16.03■□□□□ 0.16
LRIF1-202ENST00000485275 NTPCRQ9BSD7 190 aaKnown RBP16.03■□□□□ 0.16
LRIF1-202ENST00000485275 GTPBP4Q9BZE4 634 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms