RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 LIMD1Q9UGP4 676 aa14.65□□□□□ -0.06
UBR4-213ENST00000483922 PUF60Q9UHX1 559 aaKnown RBP14.65□□□□□ -0.06
UBR4-213ENST00000483922 ZNF292O60281 2723 aa14.65□□□□□ -0.06
UBR4-213ENST00000483922 PTPRZ1P23471 2315 aaPredicted RBP14.65□□□□□ -0.06
UBR4-213ENST00000483922 FSD2A1L4K1 749 aa14.64□□□□□ -0.07
UBR4-213ENST00000483922 IPO5O00410 1097 aaKnown RBP14.64□□□□□ -0.07
UBR4-213ENST00000483922 ZNF862O60290 1169 aa14.64□□□□□ -0.07
UBR4-213ENST00000483922 CSDE1O75534 798 aaKnown RBP14.64□□□□□ -0.07
UBR4-213ENST00000483922 CXCL14O95715 111 aa14.64□□□□□ -0.07
UBR4-213ENST00000483922 CYP3A4P08684 503 aa14.64□□□□□ -0.07
UBR4-213ENST00000483922 EPCAMP16422 314 aa14.64□□□□□ -0.07
UBR4-213ENST00000483922 NPR3P17342 541 aa14.64□□□□□ -0.07
UBR4-213ENST00000483922 CDC27P30260 824 aa14.64□□□□□ -0.07
UBR4-213ENST00000483922 ADCY7P51828 1080 aa14.64□□□□□ -0.07
UBR4-213ENST00000483922 EXOSC10Q01780 885 aaKnown RBP14.64□□□□□ -0.07
UBR4-213ENST00000483922 JAKMIP3Q5VZ66 844 aa14.64□□□□□ -0.07
UBR4-213ENST00000483922 MIS18BP1Q6P0N0 1132 aa14.64□□□□□ -0.07
UBR4-213ENST00000483922 APOA5Q6Q788 366 aa14.64□□□□□ -0.07
UBR4-213ENST00000483922 ZBTB33Q86T24 672 aa14.64□□□□□ -0.07
UBR4-213ENST00000483922 UBALD2Q8IYN6 164 aa14.64□□□□□ -0.07
UBR4-213ENST00000483922 LRRC71Q8N4P6 559 aa14.64□□□□□ -0.07
UBR4-213ENST00000483922 HELQQ8TDG4 1101 aa14.64□□□□□ -0.07
UBR4-213ENST00000483922 SLC22A17Q8WUG5 538 aa14.64□□□□□ -0.07
UBR4-213ENST00000483922 BCL7CQ8WUZ0 217 aaPredicted RBP14.64□□□□□ -0.07
UBR4-213ENST00000483922 CASP10Q92851 521 aa14.64□□□□□ -0.07
UBR4-213ENST00000483922 TCEANC2Q96MN5 208 aa14.64□□□□□ -0.07
UBR4-213ENST00000483922 IRF2BPLQ9H1B7 796 aa14.64□□□□□ -0.07
UBR4-213ENST00000483922 BARHL2Q9NY43 387 aa14.64□□□□□ -0.07
UBR4-213ENST00000483922 DMXL1Q9Y485 3027 aa14.64□□□□□ -0.07
UBR4-213ENST00000483922 EIF4BP23588 611 aaKnown RBP14.63□□□□□ -0.07
UBR4-213ENST00000483922 KRT17Q04695 432 aa14.63□□□□□ -0.07
UBR4-213ENST00000483922 ITIH3Q06033 890 aa14.63□□□□□ -0.07
UBR4-213ENST00000483922 DRP2Q13474 957 aa14.63□□□□□ -0.07
UBR4-213ENST00000483922 MTMR3Q13615 1198 aa14.63□□□□□ -0.07
UBR4-213ENST00000483922 ODR4Q5SWX8 454 aa14.63□□□□□ -0.07
UBR4-213ENST00000483922 RARS2Q5T160 578 aaKnown RBP14.63□□□□□ -0.07
UBR4-213ENST00000483922 CWF19L1Q69YN2 538 aaKnown RBP14.63□□□□□ -0.07
UBR4-213ENST00000483922 EFCAB12Q6NXP0 572 aa14.63□□□□□ -0.07
UBR4-213ENST00000483922 PPP1R18Q6NYC8 613 aa14.63□□□□□ -0.07
UBR4-213ENST00000483922 FRMD5Q7Z6J6 570 aa14.63□□□□□ -0.07
UBR4-213ENST00000483922 ZDHHC14Q8IZN3 488 aa14.63□□□□□ -0.07
UBR4-213ENST00000483922 RNF169Q8NCN4 708 aa14.63□□□□□ -0.07
UBR4-213ENST00000483922 LENG9Q96B70 501 aa14.63□□□□□ -0.07
UBR4-213ENST00000483922 VN1R3Q9BXE9 311 aa14.63□□□□□ -0.07
UBR4-213ENST00000483922 RNF216Q9NWF9 866 aaPredicted RBP14.63□□□□□ -0.07
UBR4-213ENST00000483922 GABBR1Q9UBS5 961 aa14.63□□□□□ -0.07
UBR4-213ENST00000483922 NR2E1Q9Y466 385 aa14.63□□□□□ -0.07
UBR4-213ENST00000483922 A0A0U1RQF3 1178 aa14.62□□□□□ -0.07
UBR4-213ENST00000483922 MEIS3P2A8K0S8 358 aa14.62□□□□□ -0.07
UBR4-213ENST00000483922 B4GALT3O60512 393 aa14.62□□□□□ -0.07
UBR4-213ENST00000483922 SRGAP2BP0DMP2 458 aa14.62□□□□□ -0.07
UBR4-213ENST00000483922 ZNF76P36508 570 aa14.62□□□□□ -0.07
UBR4-213ENST00000483922 METAP2P50579 478 aaKnown RBP eCLIP14.62□□□□□ -0.07
UBR4-213ENST00000483922 BCAR1P56945 870 aa14.62□□□□□ -0.07
UBR4-213ENST00000483922 AP3B2Q13367 1082 aa14.62□□□□□ -0.07
UBR4-213ENST00000483922 SMC1AQ14683 1233 aaKnown RBP14.62□□□□□ -0.07
UBR4-213ENST00000483922 UGCGQ16739 394 aa14.62□□□□□ -0.07
UBR4-213ENST00000483922 TPRNQ4KMQ1 711 aa14.62□□□□□ -0.07
UBR4-213ENST00000483922 ASTLQ6HA08 431 aaPredicted RBP14.62□□□□□ -0.07
UBR4-213ENST00000483922 LRRC43Q8N309 656 aa14.62□□□□□ -0.07
UBR4-213ENST00000483922 ZNF577Q9BSK1 485 aa14.62□□□□□ -0.07
UBR4-213ENST00000483922 ZBP1Q9H171 429 aa14.62□□□□□ -0.07
UBR4-213ENST00000483922 STBD1O95210 358 aa14.61□□□□□ -0.07
UBR4-213ENST00000483922 DARSP14868 501 aaKnown RBP14.61□□□□□ -0.07
UBR4-213ENST00000483922 ZSCAN20P17040 1043 aaPredicted RBP14.61□□□□□ -0.07
UBR4-213ENST00000483922 PPM1AP35813 382 aa14.61□□□□□ -0.07
UBR4-213ENST00000483922 GPC3P51654 580 aa14.61□□□□□ -0.07
UBR4-213ENST00000483922 CES5AQ6NT32 575 aa14.61□□□□□ -0.07
UBR4-213ENST00000483922 ZNF746Q6NUN9 644 aaPredicted RBP14.61□□□□□ -0.07
UBR4-213ENST00000483922 CKAP2LQ8IYA6 745 aa14.61□□□□□ -0.07
UBR4-213ENST00000483922 NECTIN4Q96NY8 510 aa14.61□□□□□ -0.07
UBR4-213ENST00000483922 CEP89Q96ST8 783 aa14.61□□□□□ -0.07
UBR4-213ENST00000483922 ESYT1Q9BSJ8 1104 aa14.61□□□□□ -0.07
UBR4-213ENST00000483922 AKT3Q9Y243 479 aa14.61□□□□□ -0.07
UBR4-213ENST00000483922 PCDHA10Q9Y5I2 948 aa14.61□□□□□ -0.07
UBR4-213ENST00000483922 GVINP1Q7Z2Y8 2422 aa14.6□□□□□ -0.07
UBR4-213ENST00000483922 HOXA2O43364 376 aa14.6□□□□□ -0.07
UBR4-213ENST00000483922 EOMESO95936 686 aa14.6□□□□□ -0.07
UBR4-213ENST00000483922 ADD1P35611 737 aaKnown RBP14.6□□□□□ -0.07
UBR4-213ENST00000483922 MTHFRP42898 656 aa14.6□□□□□ -0.07
UBR4-213ENST00000483922 CLCN5P51795 746 aa14.6□□□□□ -0.07
UBR4-213ENST00000483922 ADCK5Q3MIX3 580 aa14.6□□□□□ -0.07
UBR4-213ENST00000483922 LONRF3Q496Y0 759 aa14.6□□□□□ -0.07
UBR4-213ENST00000483922 KIAA1841Q6NSI8 718 aa14.6□□□□□ -0.07
UBR4-213ENST00000483922 TEX2Q8IWB9 1127 aa14.6□□□□□ -0.07
UBR4-213ENST00000483922 RASEFQ8IZ41 740 aa14.6□□□□□ -0.07
UBR4-213ENST00000483922 VPS52Q8N1B4 723 aa14.6□□□□□ -0.07
UBR4-213ENST00000483922 LPPQ93052 612 aa14.6□□□□□ -0.07
UBR4-213ENST00000483922 GJA10Q969M2 543 aa14.6□□□□□ -0.07
UBR4-213ENST00000483922 NRDE2Q9H7Z3 1164 aa14.6□□□□□ -0.07
UBR4-213ENST00000483922 TBC1D22BQ9NU19 505 aa14.6□□□□□ -0.07
UBR4-213ENST00000483922 IRAK3Q9Y616 596 aa14.6□□□□□ -0.07
UBR4-213ENST00000483922 FAM186AA6NE01 2351 aa14.59□□□□□ -0.07
UBR4-213ENST00000483922 TMEM150BA6NC51 233 aa14.59□□□□□ -0.07
UBR4-213ENST00000483922 MAGEB2O15479 319 aa14.59□□□□□ -0.07
UBR4-213ENST00000483922 PSAPP07602 524 aa14.59□□□□□ -0.07
UBR4-213ENST00000483922 TARBP2Q15633 366 aaKnown RBP14.59□□□□□ -0.07
UBR4-213ENST00000483922 RTN1Q16799 776 aa14.59□□□□□ -0.07
UBR4-213ENST00000483922 TMC5Q6UXY8 1006 aa14.59□□□□□ -0.07
UBR4-213ENST00000483922 SMAP1Q8IYB5 467 aaPredicted RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms