RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 SNX14Q9Y5W7 946 aa15.73■□□□□ 0.11
VARS-226ENST00000483275 CACNA1HO95180 2353 aa15.73■□□□□ 0.11
VARS-226ENST00000483275 NID2Q14112 1375 aa15.73■□□□□ 0.11
VARS-226ENST00000483275 MYO10Q9HD67 2058 aa15.72■□□□□ 0.11
VARS-226ENST00000483275 WDR64B1ANS9 1081 aa15.72■□□□□ 0.11
VARS-226ENST00000483275 CA8P35219 290 aa15.72■□□□□ 0.11
VARS-226ENST00000483275 RCAN1P53805 252 aa15.72■□□□□ 0.11
VARS-226ENST00000483275 CCT2P78371 535 aaKnown RBP15.72■□□□□ 0.11
VARS-226ENST00000483275 FAM189BP81408 668 aa15.72■□□□□ 0.11
VARS-226ENST00000483275 CBX2Q14781 532 aaPredicted RBP15.72■□□□□ 0.11
VARS-226ENST00000483275 ODR4Q5SWX8 454 aa15.72■□□□□ 0.11
VARS-226ENST00000483275 KCNT2Q6UVM3 1135 aa15.72■□□□□ 0.11
VARS-226ENST00000483275 ECHDC2Q86YB7 292 aa15.72■□□□□ 0.11
VARS-226ENST00000483275 TEX2Q8IWB9 1127 aa15.72■□□□□ 0.11
VARS-226ENST00000483275 SUSD6Q92537 303 aa15.72■□□□□ 0.11
VARS-226ENST00000483275 MRPS27Q92552 414 aaKnown RBP15.72■□□□□ 0.11
VARS-226ENST00000483275 CCDC136Q96JN2 1154 aa15.72■□□□□ 0.11
VARS-226ENST00000483275 UNC45AQ9H3U1 944 aa15.72■□□□□ 0.11
VARS-226ENST00000483275 TSHZ2Q9NRE2 1034 aa15.72■□□□□ 0.11
VARS-226ENST00000483275 DISC1Q9NRI5 854 aa15.72■□□□□ 0.11
VARS-226ENST00000483275 ZFHX2Q9C0A1 2572 aaPredicted RBP15.71■□□□□ 0.11
VARS-226ENST00000483275 CFAP54Q96N23 3096 aa15.71■□□□□ 0.11
VARS-226ENST00000483275 NT5C1B-RDH14C9J2C7 533 aa15.71■□□□□ 0.11
VARS-226ENST00000483275 PRPF3O43395 683 aaKnown RBP15.71■□□□□ 0.11
VARS-226ENST00000483275 ATF7P17544 494 aaPredicted RBP15.71■□□□□ 0.11
VARS-226ENST00000483275 GPC3P51654 580 aa15.71■□□□□ 0.11
VARS-226ENST00000483275 VCPP55072 806 aaKnown RBP15.71■□□□□ 0.11
VARS-226ENST00000483275 ANKRD54Q6NXT1 300 aa15.71■□□□□ 0.11
VARS-226ENST00000483275 SYCE2Q6PIF2 218 aa15.71■□□□□ 0.11
VARS-226ENST00000483275 BLOC1S2Q6QNY1 142 aa15.71■□□□□ 0.11
VARS-226ENST00000483275 ABI1Q8IZP0 508 aa15.71■□□□□ 0.11
VARS-226ENST00000483275 LRRC43Q8N309 656 aa15.71■□□□□ 0.11
VARS-226ENST00000483275 FEZF2Q8TBJ5 459 aa15.71■□□□□ 0.11
VARS-226ENST00000483275 CCDC12Q8WUD4 166 aaPredicted RBP15.71■□□□□ 0.11
VARS-226ENST00000483275 NLRP7Q8WX94 980 aa15.71■□□□□ 0.11
VARS-226ENST00000483275 FAM167AQ96KS9 214 aa15.71■□□□□ 0.11
VARS-226ENST00000483275 ZNF558Q96NG5 402 aa15.71■□□□□ 0.11
VARS-226ENST00000483275 S1PR5Q9H228 398 aa15.71■□□□□ 0.11
VARS-226ENST00000483275 ELAC1Q9H777 363 aaKnown RBP15.71■□□□□ 0.11
VARS-226ENST00000483275 CCDC196A0A1B0GTZ2 297 aa15.7■□□□□ 0.1
VARS-226ENST00000483275 MAGEB2O15479 319 aa15.7■□□□□ 0.1
VARS-226ENST00000483275 GAS7O60861 476 aa15.7■□□□□ 0.1
VARS-226ENST00000483275 DTNBO60941 627 aa15.7■□□□□ 0.1
VARS-226ENST00000483275 TDP2O95551 362 aa15.7■□□□□ 0.1
VARS-226ENST00000483275 PDGFBP01127 241 aaPredicted RBP15.7■□□□□ 0.1
VARS-226ENST00000483275 HMGB1P09429 215 aaKnown RBP15.7■□□□□ 0.1
VARS-226ENST00000483275 WEE2P0C1S8 567 aa15.7■□□□□ 0.1
VARS-226ENST00000483275 DARSP14868 501 aaKnown RBP15.7■□□□□ 0.1
VARS-226ENST00000483275 RPS6KB1P23443 525 aa15.7■□□□□ 0.1
VARS-226ENST00000483275 EIF4BP23588 611 aaKnown RBP15.7■□□□□ 0.1
VARS-226ENST00000483275 CIITAP33076 1130 aa15.7■□□□□ 0.1
VARS-226ENST00000483275 AKAP17AQ02040 695 aaKnown RBP15.7■□□□□ 0.1
VARS-226ENST00000483275 KCNC3Q14003 757 aa15.7■□□□□ 0.1
VARS-226ENST00000483275 NTRK3Q16288 839 aa15.7■□□□□ 0.1
VARS-226ENST00000483275 MTERF2Q49AM1 385 aa15.7■□□□□ 0.1
VARS-226ENST00000483275 LRCH2Q5VUJ6 765 aa15.7■□□□□ 0.1
VARS-226ENST00000483275 CENPQQ7L2Z9 268 aaPredicted RBP15.7■□□□□ 0.1
VARS-226ENST00000483275 TMC7Q7Z402 723 aa15.7■□□□□ 0.1
VARS-226ENST00000483275 TMEM173Q86WV6 379 aaPredicted RBP15.7■□□□□ 0.1
VARS-226ENST00000483275 AUTS2Q8WXX7 1259 aa15.7■□□□□ 0.1
VARS-226ENST00000483275 LPPQ93052 612 aa15.7■□□□□ 0.1
VARS-226ENST00000483275 CDCA3Q99618 268 aaPredicted RBP15.7■□□□□ 0.1
VARS-226ENST00000483275 LARP6Q9BRS8 491 aaKnown RBP15.7■□□□□ 0.1
VARS-226ENST00000483275 FAM86C1Q9NVL1 165 aa15.7■□□□□ 0.1
VARS-226ENST00000483275 SEPT9Q9UHD8 586 aaPredicted RBP15.7■□□□□ 0.1
VARS-226ENST00000483275 CEP131Q9UPN4 1083 aa15.7■□□□□ 0.1
VARS-226ENST00000483275 ARID2Q68CP9 1835 aa15.7■□□□□ 0.1
VARS-226ENST00000483275 ZSCAN20P17040 1043 aaPredicted RBP15.69■□□□□ 0.1
VARS-226ENST00000483275 TMOD1P28289 359 aa15.69■□□□□ 0.1
VARS-226ENST00000483275 GNA11P29992 359 aa15.69■□□□□ 0.1
VARS-226ENST00000483275 PLCB3Q01970 1234 aa15.69■□□□□ 0.1
VARS-226ENST00000483275 TBC1D8BQ0IIM8 1120 aa15.69■□□□□ 0.1
VARS-226ENST00000483275 KANK3Q6NY19 840 aa15.69■□□□□ 0.1
VARS-226ENST00000483275 SUGP1Q8IWZ8 645 aaKnown RBP15.69■□□□□ 0.1
VARS-226ENST00000483275 SLC5A5Q92911 643 aa15.69■□□□□ 0.1
VARS-226ENST00000483275 KCNB2Q92953 911 aa15.69■□□□□ 0.1
VARS-226ENST00000483275 AIFM3Q96NN9 605 aa15.69■□□□□ 0.1
VARS-226ENST00000483275 SMOC2Q9H3U7 446 aa15.69■□□□□ 0.1
VARS-226ENST00000483275 SPG21Q9NZD8 308 aa15.69■□□□□ 0.1
VARS-226ENST00000483275 LZTS1Q9Y250 596 aa15.69■□□□□ 0.1
VARS-226ENST00000483275 DENND4AQ7Z401 1863 aa15.69■□□□□ 0.1
VARS-226ENST00000483275 WDR87Q6ZQQ6 2873 aa15.69■□□□□ 0.1
VARS-226ENST00000483275 VPS13AQ96RL7 3174 aa15.68■□□□□ 0.1
VARS-226ENST00000483275 C2orf16Q68DN1 1984 aa15.68■□□□□ 0.1
VARS-226ENST00000483275 MEIS3P2A8K0S8 358 aa15.68■□□□□ 0.1
VARS-226ENST00000483275 HSPA4P34932 840 aa15.68■□□□□ 0.1
VARS-226ENST00000483275 PTPN21Q16825 1174 aa15.68■□□□□ 0.1
VARS-226ENST00000483275 ZBTB33Q86T24 672 aa15.68■□□□□ 0.1
VARS-226ENST00000483275 ZNF598Q86UK7 904 aaKnown RBP15.68■□□□□ 0.1
VARS-226ENST00000483275 SLC39A11Q8N1S5 342 aa15.68■□□□□ 0.1
VARS-226ENST00000483275 C12orf76Q8N812 135 aaPredicted RBP15.68■□□□□ 0.1
VARS-226ENST00000483275 CCDC148Q8NFR7 591 aa15.68■□□□□ 0.1
VARS-226ENST00000483275 BICD2Q8TD16 824 aa15.68■□□□□ 0.1
VARS-226ENST00000483275 TBCKQ8TEA7 893 aa15.68■□□□□ 0.1
VARS-226ENST00000483275 BCL7CQ8WUZ0 217 aaPredicted RBP15.68■□□□□ 0.1
VARS-226ENST00000483275 ASIC4Q96FT7 647 aa15.68■□□□□ 0.1
VARS-226ENST00000483275 TEKT3Q9BXF9 490 aa15.68■□□□□ 0.1
VARS-226ENST00000483275 KCNH6Q9H252 994 aa15.68■□□□□ 0.1
VARS-226ENST00000483275 RNF216Q9NWF9 866 aaPredicted RBP15.68■□□□□ 0.1
VARS-226ENST00000483275 PUF60Q9UHX1 559 aaKnown RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms