RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 POLGP54098 1239 aaPredicted RBP15.53■□□□□ 0.08
VARS-225ENST00000482996 NPEPPSP55786 919 aa15.53■□□□□ 0.08
VARS-225ENST00000482996 CYP4A11Q02928 519 aa15.53■□□□□ 0.08
VARS-225ENST00000482996 CTTNQ14247 550 aaKnown RBP15.53■□□□□ 0.08
VARS-225ENST00000482996 SKIV2LQ15477 1246 aaKnown RBP15.53■□□□□ 0.08
VARS-225ENST00000482996 SLC24A5Q71RS6 500 aa15.53■□□□□ 0.08
VARS-225ENST00000482996 TPH2Q8IWU9 490 aa15.53■□□□□ 0.08
VARS-225ENST00000482996 ZNF668Q96K58 619 aaPredicted RBP15.53■□□□□ 0.08
VARS-225ENST00000482996 MTMR9Q96QG7 549 aa15.53■□□□□ 0.08
VARS-225ENST00000482996 EIF2AK1Q9BQI3 630 aaKnown RBP15.53■□□□□ 0.08
VARS-225ENST00000482996 GCOM2Q9BZD3 368 aaPredicted RBP15.53■□□□□ 0.08
VARS-225ENST00000482996 RC3H2Q9HBD1 1191 aaKnown RBP15.53■□□□□ 0.08
VARS-225ENST00000482996 RGS18Q9NS28 235 aa15.53■□□□□ 0.08
VARS-225ENST00000482996 THEGQ9P2T0 379 aa15.53■□□□□ 0.08
VARS-225ENST00000482996 PCDHB7Q9Y5E2 793 aa15.53■□□□□ 0.08
VARS-225ENST00000482996 DLL1O00548 723 aa15.52■□□□□ 0.08
VARS-225ENST00000482996 MGEA5O60502 916 aa15.52■□□□□ 0.08
VARS-225ENST00000482996 ZSCAN20P17040 1043 aaPredicted RBP15.52■□□□□ 0.08
VARS-225ENST00000482996 CTNNB1P35222 781 aa15.52■□□□□ 0.08
VARS-225ENST00000482996 DRP2Q13474 957 aa15.52■□□□□ 0.08
VARS-225ENST00000482996 ZNF174Q15697 407 aa15.52■□□□□ 0.08
VARS-225ENST00000482996 PTPROQ16827 1216 aa15.52■□□□□ 0.08
VARS-225ENST00000482996 XKR9Q5GH70 373 aa15.52■□□□□ 0.08
VARS-225ENST00000482996 TTC38Q5R3I4 469 aa15.52■□□□□ 0.08
VARS-225ENST00000482996 ZNF410Q86VK4 478 aa15.52■□□□□ 0.08
VARS-225ENST00000482996 CMTR2Q8IYT2 770 aaKnown RBP15.52■□□□□ 0.08
VARS-225ENST00000482996 ZNF689Q96CS4 500 aaPredicted RBP15.52■□□□□ 0.08
VARS-225ENST00000482996 CCDC43Q96MW1 224 aaKnown RBP15.52■□□□□ 0.08
VARS-225ENST00000482996 INO80BQ9C086 356 aaPredicted RBP15.52■□□□□ 0.08
VARS-225ENST00000482996 TMEM60Q9H2L4 133 aa15.52■□□□□ 0.08
VARS-225ENST00000482996 WRAP73Q9P2S5 460 aaPredicted RBP15.52■□□□□ 0.08
VARS-225ENST00000482996 C9IYK1 514 aa15.51■□□□□ 0.07
VARS-225ENST00000482996 GAS2O43903 313 aaKnown RBP15.51■□□□□ 0.07
VARS-225ENST00000482996 SLITRK3O94933 977 aa15.51■□□□□ 0.07
VARS-225ENST00000482996 LYPLA2O95372 231 aa15.51■□□□□ 0.07
VARS-225ENST00000482996 RB1P06400 928 aa15.51■□□□□ 0.07
VARS-225ENST00000482996 OR52Z1P0C646 297 aa15.51■□□□□ 0.07
VARS-225ENST00000482996 GPM6BQ13491 265 aa15.51■□□□□ 0.07
VARS-225ENST00000482996 DSC3Q14574 896 aa15.51■□□□□ 0.07
VARS-225ENST00000482996 RHPN2Q8IUC4 686 aa15.51■□□□□ 0.07
VARS-225ENST00000482996 CRIPAKQ8N1N5 446 aa15.51■□□□□ 0.07
VARS-225ENST00000482996 PSPC1Q8WXF1 523 aaKnown RBP15.51■□□□□ 0.07
VARS-225ENST00000482996 CLP1Q92989 425 aaKnown RBP15.51■□□□□ 0.07
VARS-225ENST00000482996 HSD17B14Q9BPX1 270 aa15.51■□□□□ 0.07
VARS-225ENST00000482996 DHX33Q9H6R0 707 aaKnown RBP15.51■□□□□ 0.07
VARS-225ENST00000482996 PRDM6Q9NQX0 595 aa15.51■□□□□ 0.07
VARS-225ENST00000482996 A0A087WZ62 844 aa15.5■□□□□ 0.07
VARS-225ENST00000482996 H3BNC9 293 aa15.5■□□□□ 0.07
VARS-225ENST00000482996 CD2BP2O95400 341 aaKnown RBP15.5■□□□□ 0.07
VARS-225ENST00000482996 SFPQP23246 707 aaKnown RBP eCLIP15.5■□□□□ 0.07
VARS-225ENST00000482996 U2AF2P26368 475 aaKnown RBP eCLIP15.5■□□□□ 0.07
VARS-225ENST00000482996 BMPR1AP36894 532 aa15.5■□□□□ 0.07
VARS-225ENST00000482996 PAN2Q504Q3 1202 aaKnown RBP15.5■□□□□ 0.07
VARS-225ENST00000482996 ZNF579Q8NAF0 562 aaKnown RBP15.5■□□□□ 0.07
VARS-225ENST00000482996 ERMNQ8TAM6 284 aa15.5■□□□□ 0.07
VARS-225ENST00000482996 ATXN2LQ8WWM7 1075 aaKnown RBP15.5■□□□□ 0.07
VARS-225ENST00000482996 TCP11Q8WWU5 503 aa15.5■□□□□ 0.07
VARS-225ENST00000482996 NLRP4Q96MN2 994 aa15.5■□□□□ 0.07
VARS-225ENST00000482996 FDXACB1Q9BRP7 624 aaPredicted RBP15.5■□□□□ 0.07
VARS-225ENST00000482996 C11orf84Q9BUA3 381 aaPredicted RBP15.5■□□□□ 0.07
VARS-225ENST00000482996 ELAC1Q9H777 363 aaKnown RBP15.5■□□□□ 0.07
VARS-225ENST00000482996 ATP6V0A4Q9HBG4 840 aa15.5■□□□□ 0.07
VARS-225ENST00000482996 ANKEF1Q9NU02 776 aa15.5■□□□□ 0.07
VARS-225ENST00000482996 TMEM161AQ9NX61 479 aa15.5■□□□□ 0.07
VARS-225ENST00000482996 COL4A3BPQ9Y5P4 624 aa15.5■□□□□ 0.07
VARS-225ENST00000482996 TTC28Q96AY4 2481 aa15.5■□□□□ 0.07
VARS-225ENST00000482996 COL4A4P53420 1690 aaPredicted RBP15.49■□□□□ 0.07
VARS-225ENST00000482996 POTEMA6NI47 508 aa15.49■□□□□ 0.07
VARS-225ENST00000482996 H3BQV1 296 aa15.49■□□□□ 0.07
VARS-225ENST00000482996 HOXA2O43364 376 aa15.49■□□□□ 0.07
VARS-225ENST00000482996 FAM189BP81408 668 aa15.49■□□□□ 0.07
VARS-225ENST00000482996 EMC2Q15006 297 aa15.49■□□□□ 0.07
VARS-225ENST00000482996 MCTP1Q6DN14 999 aa15.49■□□□□ 0.07
VARS-225ENST00000482996 TMEM143Q96AN5 459 aa15.49■□□□□ 0.07
VARS-225ENST00000482996 MRPL38Q96DV4 380 aaKnown RBP15.49■□□□□ 0.07
VARS-225ENST00000482996 PLVAPQ9BX97 442 aa15.49■□□□□ 0.07
VARS-225ENST00000482996 DACT1Q9NYF0 836 aa15.49■□□□□ 0.07
VARS-225ENST00000482996 SMC3Q9UQE7 1217 aa15.49■□□□□ 0.07
VARS-225ENST00000482996 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.49■□□□□ 0.07
VARS-225ENST00000482996 TBKBP1A7MCY6 615 aa15.48■□□□□ 0.07
VARS-225ENST00000482996 C5orf67F2Z3F1 127 aa15.48■□□□□ 0.07
VARS-225ENST00000482996 ZBTB39O15060 712 aa15.48■□□□□ 0.07
VARS-225ENST00000482996 ASAP2O43150 1006 aa15.48■□□□□ 0.07
VARS-225ENST00000482996 CSDE1O75534 798 aaKnown RBP15.48■□□□□ 0.07
VARS-225ENST00000482996 XRCC6P12956 609 aaKnown RBP eCLIP15.48■□□□□ 0.07
VARS-225ENST00000482996 FGFR4P22455 802 aa15.48■□□□□ 0.07
VARS-225ENST00000482996 GJB2P29033 226 aa15.48■□□□□ 0.07
VARS-225ENST00000482996 TECP42680 631 aa15.48■□□□□ 0.07
VARS-225ENST00000482996 MRPS5P82675 430 aaKnown RBP15.48■□□□□ 0.07
VARS-225ENST00000482996 TIGD5Q53EQ6 642 aa15.48■□□□□ 0.07
VARS-225ENST00000482996 TJAP1Q5JTD0 557 aa15.48■□□□□ 0.07
VARS-225ENST00000482996 CATSPER4Q7RTX7 472 aa15.48■□□□□ 0.07
VARS-225ENST00000482996 KSR1Q8IVT5 923 aa15.48■□□□□ 0.07
VARS-225ENST00000482996 PRPF31Q8WWY3 499 aaKnown RBP15.48■□□□□ 0.07
VARS-225ENST00000482996 SYMPKQ92797 1274 aaKnown RBP15.48■□□□□ 0.07
VARS-225ENST00000482996 MTRQ99707 1265 aa15.48■□□□□ 0.07
VARS-225ENST00000482996 BACH2Q9BYV9 841 aa15.48■□□□□ 0.07
VARS-225ENST00000482996 TUFT1Q9NNX1 390 aa15.48■□□□□ 0.07
VARS-225ENST00000482996 CHST12Q9NRB3 414 aa15.48■□□□□ 0.07
VARS-225ENST00000482996 BMP2KQ9NSY1 1161 aaPredicted RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms