RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 MASP1P48740 699 aa8.02□□□□□ -1.13
CLK1-212ENST00000482590 TMEM62Q0P6H9 643 aa8.02□□□□□ -1.13
CLK1-212ENST00000482590 AIMP1Q12904 312 aaKnown RBP8.02□□□□□ -1.13
CLK1-212ENST00000482590 WDR43Q15061 677 aaKnown RBP eCLIP8.02□□□□□ -1.13
CLK1-212ENST00000482590 DEFB115Q30KQ5 88 aa8.02□□□□□ -1.13
CLK1-212ENST00000482590 SEZ6Q53EL9 994 aa8.02□□□□□ -1.13
CLK1-212ENST00000482590 CRTC3Q6UUV7 619 aa8.02□□□□□ -1.13
CLK1-212ENST00000482590 RPTNQ6XPR3 784 aa8.02□□□□□ -1.13
CLK1-212ENST00000482590 DBX2Q6ZNG2 339 aa8.02□□□□□ -1.13
CLK1-212ENST00000482590 PRRT2Q7Z6L0 340 aaPredicted RBP8.02□□□□□ -1.13
CLK1-212ENST00000482590 LINC01356Q8N9X3 169 aa8.02□□□□□ -1.13
CLK1-212ENST00000482590 TP53I13Q8NBR0 393 aaPredicted RBP8.02□□□□□ -1.13
CLK1-212ENST00000482590 RASGRP4Q8TDF6 673 aa8.02□□□□□ -1.13
CLK1-212ENST00000482590 APPBP2Q92624 585 aa8.02□□□□□ -1.13
CLK1-212ENST00000482590 SLC6A18Q96N87 628 aa8.02□□□□□ -1.13
CLK1-212ENST00000482590 JMJD8Q96S16 334 aa8.02□□□□□ -1.13
CLK1-212ENST00000482590 AP5S1Q9NUS5 200 aa8.02□□□□□ -1.13
CLK1-212ENST00000482590 UBP1Q9NZI7 540 aa8.02□□□□□ -1.13
CLK1-212ENST00000482590 IMPACTQ9P2X3 320 aa8.02□□□□□ -1.13
CLK1-212ENST00000482590 ADAMTS1Q9UHI8 967 aa8.02□□□□□ -1.13
CLK1-212ENST00000482590 PCDHB12Q9Y5F1 795 aa8.02□□□□□ -1.13
CLK1-212ENST00000482590 SCN9AQ15858 1988 aa8.02□□□□□ -1.13
CLK1-212ENST00000482590 CASP8AP2Q9UKL3 1982 aa8.02□□□□□ -1.13
CLK1-212ENST00000482590 SH3TC1Q8TE82 1336 aa8.02□□□□□ -1.13
CLK1-212ENST00000482590 RASSF10A6NK89 507 aa8.01□□□□□ -1.13
CLK1-212ENST00000482590 BUB1BO60566 1050 aaPredicted RBP8.01□□□□□ -1.13
CLK1-212ENST00000482590 BDNFP23560 247 aa8.01□□□□□ -1.13
CLK1-212ENST00000482590 CTCFP49711 727 aaPredicted RBP8.01□□□□□ -1.13
CLK1-212ENST00000482590 NFKB2Q00653 900 aa8.01□□□□□ -1.13
CLK1-212ENST00000482590 DHX8Q14562 1220 aaKnown RBP8.01□□□□□ -1.13
CLK1-212ENST00000482590 RASA3Q14644 834 aa8.01□□□□□ -1.13
CLK1-212ENST00000482590 PROSER3Q2NL68 480 aa8.01□□□□□ -1.13
CLK1-212ENST00000482590 DPP8Q6V1X1 898 aaPredicted RBP8.01□□□□□ -1.13
CLK1-212ENST00000482590 USP50Q70EL3 339 aaPredicted RBP8.01□□□□□ -1.13
CLK1-212ENST00000482590 DDX46Q7L014 1031 aaKnown RBP8.01□□□□□ -1.13
CLK1-212ENST00000482590 COPS6Q7L5N1 327 aa8.01□□□□□ -1.13
CLK1-212ENST00000482590 REXO1Q8N1G1 1221 aaKnown RBP8.01□□□□□ -1.13
CLK1-212ENST00000482590 SH3TC2Q8TF17 1288 aa8.01□□□□□ -1.13
CLK1-212ENST00000482590 SEC16BQ96JE7 1060 aa8.01□□□□□ -1.13
CLK1-212ENST00000482590 DEPDC7Q96QD5 511 aa8.01□□□□□ -1.13
CLK1-212ENST00000482590 VPS33BQ9H267 617 aa8.01□□□□□ -1.13
CLK1-212ENST00000482590 ADAM7Q9H2U9 754 aa8.01□□□□□ -1.13
CLK1-212ENST00000482590 ZNF408Q9H9D4 720 aa8.01□□□□□ -1.13
CLK1-212ENST00000482590 JADE2Q9NQC1 790 aa8.01□□□□□ -1.13
CLK1-212ENST00000482590 SWAP70Q9UH65 585 aa8.01□□□□□ -1.13
CLK1-212ENST00000482590 TRMT112Q9UI30 125 aaKnown RBP8.01□□□□□ -1.13
CLK1-212ENST00000482590 GGT7Q9UJ14 662 aa8.01□□□□□ -1.13
CLK1-212ENST00000482590 FBXL21Q9UKT6 434 aa8.01□□□□□ -1.13
CLK1-212ENST00000482590 ATP6V0A2Q9Y487 856 aa8.01□□□□□ -1.13
CLK1-212ENST00000482590 CDHR2Q9BYE9 1310 aa8.01□□□□□ -1.13
CLK1-212ENST00000482590 A0A1B0GUL6 1792 aa8□□□□□ -1.13
CLK1-212ENST00000482590 MEIS3P2A8K0S8 358 aa8□□□□□ -1.13
CLK1-212ENST00000482590 TNFRSF10CO14798 259 aa8□□□□□ -1.13
CLK1-212ENST00000482590 PLIN1O60240 522 aa8□□□□□ -1.13
CLK1-212ENST00000482590 CAND2O75155 1236 aa8□□□□□ -1.13
CLK1-212ENST00000482590 SSBP05455 408 aaKnown RBP eCLIP8□□□□□ -1.13
CLK1-212ENST00000482590 EPS15P42566 896 aa8□□□□□ -1.13
CLK1-212ENST00000482590 ECE1P42892 770 aa8□□□□□ -1.13
CLK1-212ENST00000482590 EXOSC10Q01780 885 aaKnown RBP8□□□□□ -1.13
CLK1-212ENST00000482590 GRM1Q13255 1194 aa8□□□□□ -1.13
CLK1-212ENST00000482590 HDAC1Q13547 482 aaPredicted RBP8□□□□□ -1.13
CLK1-212ENST00000482590 GRAPQ13588 217 aa8□□□□□ -1.13
CLK1-212ENST00000482590 AUHQ13825 339 aaKnown RBP8□□□□□ -1.13
CLK1-212ENST00000482590 SLC10A5Q5PT55 438 aa8□□□□□ -1.13
CLK1-212ENST00000482590 RTP2Q5QGT7 225 aa8□□□□□ -1.13
CLK1-212ENST00000482590 WDR78Q5VTH9 848 aa8□□□□□ -1.13
CLK1-212ENST00000482590 NLRP10Q86W26 655 aa8□□□□□ -1.13
CLK1-212ENST00000482590 AMOTL1Q8IY63 956 aa8□□□□□ -1.13
CLK1-212ENST00000482590 SAMD3Q8N6K7 520 aa8□□□□□ -1.13
CLK1-212ENST00000482590 GRAPLQ8TC17 118 aaPredicted RBP8□□□□□ -1.13
CLK1-212ENST00000482590 DDX21Q9NR30 783 aaKnown RBP eCLIP8□□□□□ -1.13
CLK1-212ENST00000482590 ADARB2Q9NS39 739 aaKnown RBP8□□□□□ -1.13
CLK1-212ENST00000482590 FBXO9Q9UK97 447 aaPredicted RBP8□□□□□ -1.13
CLK1-212ENST00000482590 ECM29Q5VYK3 1845 aa8□□□□□ -1.13
CLK1-212ENST00000482590 WDR33Q9C0J8 1336 aaKnown RBP8□□□□□ -1.13
CLK1-212ENST00000482590 IRS2Q9Y4H2 1338 aa8□□□□□ -1.13
CLK1-212ENST00000482590 COL4A1P02462 1669 aa7.99□□□□□ -1.13
CLK1-212ENST00000482590 FAM221BA6H8Z2 402 aa7.99□□□□□ -1.13
CLK1-212ENST00000482590 KLF4O43474 513 aa7.99□□□□□ -1.13
CLK1-212ENST00000482590 LDHAP00338 332 aaKnown RBP7.99□□□□□ -1.13
CLK1-212ENST00000482590 HOXB7P09629 217 aa7.99□□□□□ -1.13
CLK1-212ENST00000482590 IGFBP6P24592 240 aaPredicted RBP7.99□□□□□ -1.13
CLK1-212ENST00000482590 MAP2K1Q02750 393 aaPredicted RBP7.99□□□□□ -1.13
CLK1-212ENST00000482590 KIAA2012Q0VF49 1180 aa7.99□□□□□ -1.13
CLK1-212ENST00000482590 TCIRG1Q13488 830 aa7.99□□□□□ -1.13
CLK1-212ENST00000482590 PLEKHN1Q494U1 663 aaPredicted RBP7.99□□□□□ -1.13
CLK1-212ENST00000482590 HOMER1Q86YM7 354 aa7.99□□□□□ -1.13
CLK1-212ENST00000482590 RUNDC1Q96C34 613 aa7.99□□□□□ -1.13
CLK1-212ENST00000482590 PKNOX2Q96KN3 472 aa7.99□□□□□ -1.13
CLK1-212ENST00000482590 TEPSINQ96N21 525 aa7.99□□□□□ -1.13
CLK1-212ENST00000482590 SLC9A7Q96T83 725 aa7.99□□□□□ -1.13
CLK1-212ENST00000482590 PRR13Q9NZ81 148 aa7.99□□□□□ -1.13
CLK1-212ENST00000482590 GPRC5DQ9NZD1 345 aa7.99□□□□□ -1.13
CLK1-212ENST00000482590 SFMBT1Q9UHJ3 866 aa7.99□□□□□ -1.13
CLK1-212ENST00000482590 ZNRF3Q9ULT6 936 aa7.99□□□□□ -1.13
CLK1-212ENST00000482590 ZNF646O15015 1829 aaPredicted RBP7.99□□□□□ -1.13
CLK1-212ENST00000482590 IFRD1O00458 451 aaPredicted RBP7.98□□□□□ -1.13
CLK1-212ENST00000482590 BBOX1O75936 387 aa7.98□□□□□ -1.13
CLK1-212ENST00000482590 MSL3P1P0C860 447 aa7.98□□□□□ -1.13
CLK1-212ENST00000482590 MCCP23508 829 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms