RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 CUL4AQ13619 759 aa12.77□□□□□ -0.37
RAPGEF1-207ENST00000481260 PAN2Q504Q3 1202 aaKnown RBP12.77□□□□□ -0.37
RAPGEF1-207ENST00000481260 POTEGQ6S5H5 508 aa12.77□□□□□ -0.37
RAPGEF1-207ENST00000481260 C4orf19Q8IY42 314 aa12.77□□□□□ -0.37
RAPGEF1-207ENST00000481260 YME1L1Q96TA2 773 aa12.77□□□□□ -0.37
RAPGEF1-207ENST00000481260 ADAM2Q99965 735 aa12.77□□□□□ -0.37
RAPGEF1-207ENST00000481260 FDXACB1Q9BRP7 624 aaPredicted RBP12.77□□□□□ -0.37
RAPGEF1-207ENST00000481260 MINDY3Q9H8M7 445 aa12.77□□□□□ -0.37
RAPGEF1-207ENST00000481260 POLD4Q9HCU8 107 aa12.77□□□□□ -0.37
RAPGEF1-207ENST00000481260 RNF19AQ9NV58 838 aa12.77□□□□□ -0.37
RAPGEF1-207ENST00000481260 MTCH2Q9Y6C9 303 aa12.77□□□□□ -0.37
RAPGEF1-207ENST00000481260 TTC3P53804 2025 aa12.76□□□□□ -0.37
RAPGEF1-207ENST00000481260 DARSP14868 501 aaKnown RBP12.76□□□□□ -0.37
RAPGEF1-207ENST00000481260 CDC25AP30304 524 aa12.76□□□□□ -0.37
RAPGEF1-207ENST00000481260 GNL2Q13823 731 aaKnown RBP12.76□□□□□ -0.37
RAPGEF1-207ENST00000481260 XKR9Q5GH70 373 aa12.76□□□□□ -0.37
RAPGEF1-207ENST00000481260 FAM102BQ5T8I3 360 aa12.76□□□□□ -0.37
RAPGEF1-207ENST00000481260 CATSPER3Q86XQ3 398 aa12.76□□□□□ -0.37
RAPGEF1-207ENST00000481260 RHPN2Q8IUC4 686 aa12.76□□□□□ -0.37
RAPGEF1-207ENST00000481260 ASAP3Q8TDY4 903 aa12.76□□□□□ -0.37
RAPGEF1-207ENST00000481260 PRPF31Q8WWY3 499 aaKnown RBP12.76□□□□□ -0.37
RAPGEF1-207ENST00000481260 NLRP7Q8WX94 980 aa12.76□□□□□ -0.37
RAPGEF1-207ENST00000481260 ZNF689Q96CS4 500 aaPredicted RBP12.76□□□□□ -0.37
RAPGEF1-207ENST00000481260 MAP7D2Q96T17 732 aa12.76□□□□□ -0.37
RAPGEF1-207ENST00000481260 DHX33Q9H6R0 707 aaKnown RBP12.76□□□□□ -0.37
RAPGEF1-207ENST00000481260 ZSWIM4Q9H7M6 989 aa12.76□□□□□ -0.37
RAPGEF1-207ENST00000481260 SMC3Q9UQE7 1217 aa12.76□□□□□ -0.37
RAPGEF1-207ENST00000481260 INSL6Q9Y581 213 aa12.76□□□□□ -0.37
RAPGEF1-207ENST00000481260 SQORQ9Y6N5 450 aa12.76□□□□□ -0.37
RAPGEF1-207ENST00000481260 MUC3AQ02505 3323 aa12.75□□□□□ -0.37
RAPGEF1-207ENST00000481260 C9IYK1 514 aa12.75□□□□□ -0.37
RAPGEF1-207ENST00000481260 DGKIO75912 1065 aa12.75□□□□□ -0.37
RAPGEF1-207ENST00000481260 CSPG5O95196 566 aa12.75□□□□□ -0.37
RAPGEF1-207ENST00000481260 FGFR1P11362 822 aa12.75□□□□□ -0.37
RAPGEF1-207ENST00000481260 EIF4BP23588 611 aaKnown RBP12.75□□□□□ -0.37
RAPGEF1-207ENST00000481260 PTGDRQ13258 359 aa12.75□□□□□ -0.37
RAPGEF1-207ENST00000481260 EMC2Q15006 297 aa12.75□□□□□ -0.37
RAPGEF1-207ENST00000481260 EPC2Q52LR7 807 aa12.75□□□□□ -0.37
RAPGEF1-207ENST00000481260 FERMT3Q86UX7 667 aa12.75□□□□□ -0.37
RAPGEF1-207ENST00000481260 NLRP4Q96MN2 994 aa12.75□□□□□ -0.37
RAPGEF1-207ENST00000481260 TGS1Q96RS0 853 aaKnown RBP12.75□□□□□ -0.37
RAPGEF1-207ENST00000481260 GAS2L1Q99501 681 aaPredicted RBP12.75□□□□□ -0.37
RAPGEF1-207ENST00000481260 IFT122Q9HBG6 1241 aa12.75□□□□□ -0.37
RAPGEF1-207ENST00000481260 GPRC5CQ9NQ84 441 aa12.75□□□□□ -0.37
RAPGEF1-207ENST00000481260 MRPL42Q9Y6G3 142 aaKnown RBP12.75□□□□□ -0.37
RAPGEF1-207ENST00000481260 ADGRA3Q8IWK6 1321 aa12.74□□□□□ -0.37
RAPGEF1-207ENST00000481260 MEIS3P2A8K0S8 358 aa12.74□□□□□ -0.37
RAPGEF1-207ENST00000481260 SRGAP2CP0DJJ0 459 aa12.74□□□□□ -0.37
RAPGEF1-207ENST00000481260 ATF7P17544 494 aaPredicted RBP12.74□□□□□ -0.37
RAPGEF1-207ENST00000481260 TMOD1P28289 359 aa12.74□□□□□ -0.37
RAPGEF1-207ENST00000481260 MCM2P49736 904 aa12.74□□□□□ -0.37
RAPGEF1-207ENST00000481260 RARRES1P49788 294 aa12.74□□□□□ -0.37
RAPGEF1-207ENST00000481260 POLGP54098 1239 aaPredicted RBP12.74□□□□□ -0.37
RAPGEF1-207ENST00000481260 LAMTOR4Q0VGL1 99 aa12.74□□□□□ -0.37
RAPGEF1-207ENST00000481260 LONRF3Q496Y0 759 aa12.74□□□□□ -0.37
RAPGEF1-207ENST00000481260 FAM173BQ6P4H8 233 aa12.74□□□□□ -0.37
RAPGEF1-207ENST00000481260 MAEAQ7L5Y9 396 aa12.74□□□□□ -0.37
RAPGEF1-207ENST00000481260 SCLT1Q96NL6 688 aa12.74□□□□□ -0.37
RAPGEF1-207ENST00000481260 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.74□□□□□ -0.37
RAPGEF1-207ENST00000481260 RGS18Q9NS28 235 aa12.74□□□□□ -0.37
RAPGEF1-207ENST00000481260 ARID2Q68CP9 1835 aa12.74□□□□□ -0.37
RAPGEF1-207ENST00000481260 CUL9Q8IWT3 2517 aa12.73□□□□□ -0.37
RAPGEF1-207ENST00000481260 DENND3A2RUS2 1198 aa12.73□□□□□ -0.37
RAPGEF1-207ENST00000481260 H3BQV1 296 aa12.73□□□□□ -0.37
RAPGEF1-207ENST00000481260 GPR182O15218 404 aa12.73□□□□□ -0.37
RAPGEF1-207ENST00000481260 LYPLA2O95372 231 aa12.73□□□□□ -0.37
RAPGEF1-207ENST00000481260 RPLP2P05387 115 aaKnown RBP12.73□□□□□ -0.37
RAPGEF1-207ENST00000481260 TRAPPC10P48553 1259 aa12.73□□□□□ -0.37
RAPGEF1-207ENST00000481260 SARSP49591 514 aaKnown RBP12.73□□□□□ -0.37
RAPGEF1-207ENST00000481260 FAM189BP81408 668 aa12.73□□□□□ -0.37
RAPGEF1-207ENST00000481260 GRIN1Q05586 938 aa12.73□□□□□ -0.37
RAPGEF1-207ENST00000481260 LARP1BQ659C4 914 aaKnown RBP12.73□□□□□ -0.37
RAPGEF1-207ENST00000481260 KCNK18Q7Z418 384 aa12.73□□□□□ -0.37
RAPGEF1-207ENST00000481260 NPAS4Q8IUM7 802 aa12.73□□□□□ -0.37
RAPGEF1-207ENST00000481260 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.73□□□□□ -0.37
RAPGEF1-207ENST00000481260 TMEM192Q8IY95 271 aa12.73□□□□□ -0.37
RAPGEF1-207ENST00000481260 FBXO22Q8NEZ5 403 aa12.73□□□□□ -0.37
RAPGEF1-207ENST00000481260 MMTAG2Q9BU76 263 aaKnown RBP12.73□□□□□ -0.37
RAPGEF1-207ENST00000481260 FTHL17Q9BXU8 183 aa12.73□□□□□ -0.37
RAPGEF1-207ENST00000481260 NOL7Q9UMY1 257 aaKnown RBP12.73□□□□□ -0.37
RAPGEF1-207ENST00000481260 USP20Q9Y2K6 914 aa12.73□□□□□ -0.37
RAPGEF1-207ENST00000481260 COL4A3BPQ9Y5P4 624 aa12.73□□□□□ -0.37
RAPGEF1-207ENST00000481260 MYO7AQ13402 2215 aa12.73□□□□□ -0.37
RAPGEF1-207ENST00000481260 GRM6O15303 877 aa12.72□□□□□ -0.37
RAPGEF1-207ENST00000481260 USO1O60763 962 aaKnown RBP12.72□□□□□ -0.37
RAPGEF1-207ENST00000481260 GLRA2P23416 452 aa12.72□□□□□ -0.37
RAPGEF1-207ENST00000481260 DNAJB1P25685 340 aa12.72□□□□□ -0.37
RAPGEF1-207ENST00000481260 CTNNB1P35222 781 aa12.72□□□□□ -0.37
RAPGEF1-207ENST00000481260 RFC5P40937 340 aa12.72□□□□□ -0.37
RAPGEF1-207ENST00000481260 FXR2P51116 673 aaKnown RBP eCLIP12.72□□□□□ -0.373e-7■■■■■ 33.1
RAPGEF1-207ENST00000481260 TFF2Q03403 129 aa12.72□□□□□ -0.37
RAPGEF1-207ENST00000481260 BTG3Q14201 252 aaPredicted RBP12.72□□□□□ -0.37
RAPGEF1-207ENST00000481260 CLLU1OSQ5K130 101 aa12.72□□□□□ -0.37
RAPGEF1-207ENST00000481260 LRRC55Q6ZSA7 311 aa12.72□□□□□ -0.37
RAPGEF1-207ENST00000481260 FIBCD1Q8N539 461 aa12.72□□□□□ -0.37
RAPGEF1-207ENST00000481260 RNF169Q8NCN4 708 aa12.72□□□□□ -0.37
RAPGEF1-207ENST00000481260 LRRC15Q8TF66 581 aa12.72□□□□□ -0.37
RAPGEF1-207ENST00000481260 SLC7A3Q8WY07 619 aa12.72□□□□□ -0.37
RAPGEF1-207ENST00000481260 BSNDQ8WZ55 320 aa12.72□□□□□ -0.37
RAPGEF1-207ENST00000481260 LPPQ93052 612 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms