RNA–Protein interactions for RNA: ENST00000480923.5

VPS36-204, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-204ENST00000480923 CCDC85BQ15834 202 aaPredicted RBP22.51■■□□□ 1.19
VPS36-204ENST00000480923 RHPN2Q8IUC4 686 aa22.51■■□□□ 1.19
VPS36-204ENST00000480923 FIBCD1Q8N539 461 aa22.51■■□□□ 1.19
VPS36-204ENST00000480923 GDPD5Q8WTR4 605 aa22.51■■□□□ 1.19
VPS36-204ENST00000480923 CCDC43Q96MW1 224 aaKnown RBP22.51■■□□□ 1.19
VPS36-204ENST00000480923 GCOM2Q9BZD3 368 aaPredicted RBP22.51■■□□□ 1.19
VPS36-204ENST00000480923 C1orf112Q9NSG2 853 aa22.51■■□□□ 1.19
VPS36-204ENST00000480923 EVPLQ92817 2033 aa22.51■■□□□ 1.19
VPS36-204ENST00000480923 LYPLA2O95372 231 aa22.5■■□□□ 1.19
VPS36-204ENST00000480923 SARSP49591 514 aaKnown RBP22.5■■□□□ 1.19
VPS36-204ENST00000480923 TOB1P50616 345 aaPredicted RBP22.5■■□□□ 1.19
VPS36-204ENST00000480923 FBXO22Q8NEZ5 403 aa22.5■■□□□ 1.19
VPS36-204ENST00000480923 DHX33Q9H6R0 707 aaKnown RBP22.5■■□□□ 1.19
VPS36-204ENST00000480923 RGS18Q9NS28 235 aa22.5■■□□□ 1.19
VPS36-204ENST00000480923 PCDHB6Q9Y5E3 794 aa22.5■■□□□ 1.19
VPS36-204ENST00000480923 ADGRA3Q8IWK6 1321 aa22.5■■□□□ 1.19
VPS36-204ENST00000480923 A0A087WZ62 844 aa22.49■■□□□ 1.19
VPS36-204ENST00000480923 DGKIO75912 1065 aa22.49■■□□□ 1.19
VPS36-204ENST00000480923 FGFR4P22455 802 aa22.49■■□□□ 1.19
VPS36-204ENST00000480923 BTG3Q14201 252 aaPredicted RBP22.49■■□□□ 1.19
VPS36-204ENST00000480923 EMC2Q15006 297 aa22.49■■□□□ 1.19
VPS36-204ENST00000480923 LARP1BQ659C4 914 aaKnown RBP22.49■■□□□ 1.19
VPS36-204ENST00000480923 SLC24A5Q71RS6 500 aa22.49■■□□□ 1.19
VPS36-204ENST00000480923 ERMNQ8TAM6 284 aa22.49■■□□□ 1.19
VPS36-204ENST00000480923 TMEM143Q96AN5 459 aa22.49■■□□□ 1.19
VPS36-204ENST00000480923 NLRP4Q96MN2 994 aa22.49■■□□□ 1.19
VPS36-204ENST00000480923 SAMD11Q96NU1 681 aa22.49■■□□□ 1.19
VPS36-204ENST00000480923 FDXACB1Q9BRP7 624 aaPredicted RBP22.49■■□□□ 1.19
VPS36-204ENST00000480923 PCDHB7Q9Y5E2 793 aa22.49■■□□□ 1.19
VPS36-204ENST00000480923 CSDE1O75534 798 aaKnown RBP22.48■■□□□ 1.19
VPS36-204ENST00000480923 ZSCAN20P17040 1043 aaPredicted RBP22.48■■□□□ 1.19
VPS36-204ENST00000480923 CUL4AQ13619 759 aa22.48■■□□□ 1.19
VPS36-204ENST00000480923 ZNF410Q86VK4 478 aa22.48■■□□□ 1.19
VPS36-204ENST00000480923 KSR1Q8IVT5 923 aa22.48■■□□□ 1.19
VPS36-204ENST00000480923 C4orf32Q8N8J7 132 aa22.48■■□□□ 1.19
VPS36-204ENST00000480923 PSPC1Q8WXF1 523 aaKnown RBP22.48■■□□□ 1.19
VPS36-204ENST00000480923 ZNF689Q96CS4 500 aaPredicted RBP22.48■■□□□ 1.19
VPS36-204ENST00000480923 RC3H2Q9HBD1 1191 aaKnown RBP22.48■■□□□ 1.19
VPS36-204ENST00000480923 ANKEF1Q9NU02 776 aa22.48■■□□□ 1.19
VPS36-204ENST00000480923 RNF216Q9NWF9 866 aaPredicted RBP22.48■■□□□ 1.19
VPS36-204ENST00000480923 COL4A3BPQ9Y5P4 624 aa22.48■■□□□ 1.19
VPS36-204ENST00000480923 MTCH2Q9Y6C9 303 aa22.48■■□□□ 1.19
VPS36-204ENST00000480923 A0A087WWV3 80 aa22.47■■□□□ 1.19
VPS36-204ENST00000480923 C9IYK1 514 aa22.47■■□□□ 1.19
VPS36-204ENST00000480923 GAS2O43903 313 aaKnown RBP22.47■■□□□ 1.19
VPS36-204ENST00000480923 LPXNO60711 386 aa22.47■■□□□ 1.19
VPS36-204ENST00000480923 MED24O75448 989 aa22.47■■□□□ 1.19
VPS36-204ENST00000480923 SPATA31C1P0DKV0 1188 aa22.47■■□□□ 1.19
VPS36-204ENST00000480923 PTGDRQ13258 359 aa22.47■■□□□ 1.19
VPS36-204ENST00000480923 DSC3Q14574 896 aa22.47■■□□□ 1.19
VPS36-204ENST00000480923 EPC2Q52LR7 807 aa22.47■■□□□ 1.19
VPS36-204ENST00000480923 CATSPER3Q86XQ3 398 aa22.47■■□□□ 1.19
VPS36-204ENST00000480923 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.47■■□□□ 1.19
VPS36-204ENST00000480923 TMEM192Q8IY95 271 aa22.47■■□□□ 1.19
VPS36-204ENST00000480923 CRIPAKQ8N1N5 446 aa22.47■■□□□ 1.19
VPS36-204ENST00000480923 PIGOQ8TEQ8 1089 aa22.47■■□□□ 1.19
VPS36-204ENST00000480923 TCP11Q8WWU5 503 aa22.47■■□□□ 1.19
VPS36-204ENST00000480923 MTRQ99707 1265 aa22.47■■□□□ 1.19
VPS36-204ENST00000480923 INO80BQ9C086 356 aaPredicted RBP22.47■■□□□ 1.19
VPS36-204ENST00000480923 TUFT1Q9NNX1 390 aa22.47■■□□□ 1.19
VPS36-204ENST00000480923 CHD7Q9P2D1 2997 aa22.47■■□□□ 1.19
VPS36-204ENST00000480923 COL4A6Q14031 1691 aa22.46■■□□□ 1.19
VPS36-204ENST00000480923 POU3F3P20264 500 aaPredicted RBP22.46■■□□□ 1.19
VPS36-204ENST00000480923 SFPQP23246 707 aaKnown RBP eCLIP22.46■■□□□ 1.19
VPS36-204ENST00000480923 RARRES1P49788 294 aa22.46■■□□□ 1.19
VPS36-204ENST00000480923 PAN2Q504Q3 1202 aaKnown RBP22.46■■□□□ 1.19
VPS36-204ENST00000480923 RILPL1Q5EBL4 403 aa22.46■■□□□ 1.19
VPS36-204ENST00000480923 PRPF31Q8WWY3 499 aaKnown RBP22.46■■□□□ 1.19
VPS36-204ENST00000480923 POLR3CQ9BUI4 534 aaPredicted RBP22.46■■□□□ 1.19
VPS36-204ENST00000480923 LOXHD1Q8IVV2 1947 aa22.45■■□□□ 1.18
VPS36-204ENST00000480923 CTNNB1P35222 781 aa22.45■■□□□ 1.18
VPS36-204ENST00000480923 GATMP50440 423 aa22.45■■□□□ 1.18
VPS36-204ENST00000480923 FXR2P51116 673 aaKnown RBP eCLIP22.45■■□□□ 1.18
VPS36-204ENST00000480923 HAUS3Q68CZ6 603 aa22.45■■□□□ 1.18
VPS36-204ENST00000480923 CMTR2Q8IYT2 770 aaKnown RBP22.45■■□□□ 1.18
VPS36-204ENST00000480923 ATP6V0A4Q9HBG4 840 aa22.45■■□□□ 1.18
VPS36-204ENST00000480923 XPNPEP1Q9NQW7 623 aa22.45■■□□□ 1.18
VPS36-204ENST00000480923 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.45■■□□□ 1.18
VPS36-204ENST00000480923 LRWD1Q9UFC0 647 aa22.45■■□□□ 1.18
VPS36-204ENST00000480923 LAD1O00515 517 aa22.44■■□□□ 1.18
VPS36-204ENST00000480923 DGAT1O75907 488 aa22.44■■□□□ 1.18
VPS36-204ENST00000480923 SRGAP2CP0DJJ0 459 aa22.44■■□□□ 1.18
VPS36-204ENST00000480923 XRCC6P12956 609 aaKnown RBP eCLIP22.44■■□□□ 1.18
VPS36-204ENST00000480923 RPA1P27694 616 aa22.44■■□□□ 1.18
VPS36-204ENST00000480923 CCT6AP40227 531 aaKnown RBP22.44■■□□□ 1.18
VPS36-204ENST00000480923 LAMTOR4Q0VGL1 99 aa22.44■■□□□ 1.18
VPS36-204ENST00000480923 CATSPER4Q7RTX7 472 aa22.44■■□□□ 1.18
VPS36-204ENST00000480923 FERMT3Q86UX7 667 aa22.44■■□□□ 1.18
VPS36-204ENST00000480923 NACC1Q96RE7 527 aa22.44■■□□□ 1.18
VPS36-204ENST00000480923 RAB34Q9BZG1 259 aa22.44■■□□□ 1.18
VPS36-204ENST00000480923 TMEM161AQ9NX61 479 aa22.44■■□□□ 1.18
VPS36-204ENST00000480923 RWDD3Q9Y3V2 267 aa22.44■■□□□ 1.18
VPS36-204ENST00000480923 TTC3P53804 2025 aa22.43■■□□□ 1.18
VPS36-204ENST00000480923 ASAP2O43150 1006 aa22.43■■□□□ 1.18
VPS36-204ENST00000480923 USO1O60763 962 aaKnown RBP22.43■■□□□ 1.18
VPS36-204ENST00000480923 FAM189BP81408 668 aa22.43■■□□□ 1.18
VPS36-204ENST00000480923 GPM6BQ13491 265 aa22.43■■□□□ 1.18
VPS36-204ENST00000480923 SKIV2LQ15477 1246 aaKnown RBP22.43■■□□□ 1.18
VPS36-204ENST00000480923 POTEGQ6S5H5 508 aa22.43■■□□□ 1.18
VPS36-204ENST00000480923 RNF149Q8NC42 400 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 137.7 ms