RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 SLC24A5Q71RS6 500 aa19.04■□□□□ 0.64
HSPG2-209ENST00000480900 NOSTRINQ8IVI9 506 aa19.04■□□□□ 0.64
HSPG2-209ENST00000480900 CMTR2Q8IYT2 770 aaKnown RBP19.04■□□□□ 0.64
HSPG2-209ENST00000480900 CLP1Q92989 425 aaKnown RBP19.04■□□□□ 0.64
HSPG2-209ENST00000480900 DYDC2Q96IM9 177 aa19.04■□□□□ 0.64
HSPG2-209ENST00000480900 PRDM6Q9NQX0 595 aa19.04■□□□□ 0.64
HSPG2-209ENST00000480900 RGL1Q9NZL6 768 aa19.04■□□□□ 0.64
HSPG2-209ENST00000480900 LRFN2Q9ULH4 789 aa19.04■□□□□ 0.64
HSPG2-209ENST00000480900 KIF3AQ9Y496 699 aa19.04■□□□□ 0.64
HSPG2-209ENST00000480900 C9IYK1 514 aa19.03■□□□□ 0.64
HSPG2-209ENST00000480900 C5orf67F2Z3F1 127 aa19.03■□□□□ 0.64
HSPG2-209ENST00000480900 H3BNC9 293 aa19.03■□□□□ 0.64
HSPG2-209ENST00000480900 LINC00271P0C7V0 271 aa19.03■□□□□ 0.64
HSPG2-209ENST00000480900 ATP2B1P20020 1258 aa19.03■□□□□ 0.64
HSPG2-209ENST00000480900 YWHABP31946 246 aaKnown RBP19.03■□□□□ 0.64
HSPG2-209ENST00000480900 MCM7P33993 719 aa19.03■□□□□ 0.64
HSPG2-209ENST00000480900 RFC5P40937 340 aa19.03■□□□□ 0.64
HSPG2-209ENST00000480900 TXKP42681 527 aa19.03■□□□□ 0.64
HSPG2-209ENST00000480900 MCM2P49736 904 aa19.03■□□□□ 0.64
HSPG2-209ENST00000480900 NPEPPSP55786 919 aa19.03■□□□□ 0.64
HSPG2-209ENST00000480900 CYP4A11Q02928 519 aa19.03■□□□□ 0.64
HSPG2-209ENST00000480900 GNL2Q13823 731 aaKnown RBP19.03■□□□□ 0.64
HSPG2-209ENST00000480900 CTTNQ14247 550 aaKnown RBP19.03■□□□□ 0.64
HSPG2-209ENST00000480900 OTUD6AQ7L8S5 288 aa19.03■□□□□ 0.64
HSPG2-209ENST00000480900 ZNF410Q86VK4 478 aa19.03■□□□□ 0.64
HSPG2-209ENST00000480900 NLRP7Q8WX94 980 aa19.03■□□□□ 0.64
HSPG2-209ENST00000480900 SLC7A3Q8WY07 619 aa19.03■□□□□ 0.64
HSPG2-209ENST00000480900 TMX3Q96JJ7 454 aa19.03■□□□□ 0.64
HSPG2-209ENST00000480900 CEP170P1Q96L14 293 aa19.03■□□□□ 0.64
HSPG2-209ENST00000480900 HSD17B14Q9BPX1 270 aa19.03■□□□□ 0.64
HSPG2-209ENST00000480900 EIF2AK1Q9BQI3 630 aaKnown RBP19.03■□□□□ 0.64
HSPG2-209ENST00000480900 TMEM60Q9H2L4 133 aa19.03■□□□□ 0.64
HSPG2-209ENST00000480900 DHX33Q9H6R0 707 aaKnown RBP19.03■□□□□ 0.64
HSPG2-209ENST00000480900 SUCLA2Q9P2R7 463 aaPredicted RBP19.03■□□□□ 0.64
HSPG2-209ENST00000480900 LYPLA2O95372 231 aa19.02■□□□□ 0.64
HSPG2-209ENST00000480900 CD2BP2O95400 341 aaKnown RBP19.02■□□□□ 0.64
HSPG2-209ENST00000480900 RB1P06400 928 aa19.02■□□□□ 0.64
HSPG2-209ENST00000480900 CTNNB1P35222 781 aa19.02■□□□□ 0.64
HSPG2-209ENST00000480900 TRAPPC10P48553 1259 aa19.02■□□□□ 0.64
HSPG2-209ENST00000480900 POLGP54098 1239 aaPredicted RBP19.02■□□□□ 0.64
HSPG2-209ENST00000480900 TPH2Q8IWU9 490 aa19.02■□□□□ 0.64
HSPG2-209ENST00000480900 ATXN2LQ8WWM7 1075 aaKnown RBP19.02■□□□□ 0.64
HSPG2-209ENST00000480900 ZNF668Q96K58 619 aaPredicted RBP19.02■□□□□ 0.64
HSPG2-209ENST00000480900 GCOM2Q9BZD3 368 aaPredicted RBP19.02■□□□□ 0.64
HSPG2-209ENST00000480900 PCDHB7Q9Y5E2 793 aa19.02■□□□□ 0.64
HSPG2-209ENST00000480900 DLL1O00548 723 aa19.01■□□□□ 0.63
HSPG2-209ENST00000480900 GAS2O43903 313 aaKnown RBP19.01■□□□□ 0.63
HSPG2-209ENST00000480900 SLITRK3O94933 977 aa19.01■□□□□ 0.63
HSPG2-209ENST00000480900 U2AF2P26368 475 aaKnown RBP eCLIP19.01■□□□□ 0.63
HSPG2-209ENST00000480900 BMPR1AP36894 532 aa19.01■□□□□ 0.63
HSPG2-209ENST00000480900 FAM189BP81408 668 aa19.01■□□□□ 0.63
HSPG2-209ENST00000480900 GPM6BQ13491 265 aa19.01■□□□□ 0.63
HSPG2-209ENST00000480900 PTPROQ16827 1216 aa19.01■□□□□ 0.63
HSPG2-209ENST00000480900 ZNF579Q8NAF0 562 aaKnown RBP19.01■□□□□ 0.63
HSPG2-209ENST00000480900 MRPL38Q96DV4 380 aaKnown RBP19.01■□□□□ 0.63
HSPG2-209ENST00000480900 C11orf84Q9BUA3 381 aaPredicted RBP19.01■□□□□ 0.63
HSPG2-209ENST00000480900 ELAC1Q9H777 363 aaKnown RBP19.01■□□□□ 0.63
HSPG2-209ENST00000480900 NOL7Q9UMY1 257 aaKnown RBP19.01■□□□□ 0.63
HSPG2-209ENST00000480900 VCANP13611 3396 aa19.01■□□□□ 0.63
HSPG2-209ENST00000480900 OR52Z1P0C646 297 aa19■□□□□ 0.63
HSPG2-209ENST00000480900 ZSCAN20P17040 1043 aaPredicted RBP19■□□□□ 0.63
HSPG2-209ENST00000480900 EMC2Q15006 297 aa19■□□□□ 0.63
HSPG2-209ENST00000480900 SKIV2LQ15477 1246 aaKnown RBP19■□□□□ 0.63
HSPG2-209ENST00000480900 XKR9Q5GH70 373 aa19■□□□□ 0.63
HSPG2-209ENST00000480900 TTC38Q5R3I4 469 aa19■□□□□ 0.63
HSPG2-209ENST00000480900 RHPN2Q8IUC4 686 aa19■□□□□ 0.63
HSPG2-209ENST00000480900 PLVAPQ9BX97 442 aa19■□□□□ 0.63
HSPG2-209ENST00000480900 INO80BQ9C086 356 aaPredicted RBP19■□□□□ 0.63
HSPG2-209ENST00000480900 TMEM161AQ9NX61 479 aa19■□□□□ 0.63
HSPG2-209ENST00000480900 MRPL42Q9Y6G3 142 aaKnown RBP19■□□□□ 0.63
HSPG2-209ENST00000480900 TCF20Q9UGU0 1960 aaKnown RBP19■□□□□ 0.63
HSPG2-209ENST00000480900 PLXNA4Q9HCM2 1894 aa18.99■□□□□ 0.63
HSPG2-209ENST00000480900 A0A087WZ62 844 aa18.99■□□□□ 0.63
HSPG2-209ENST00000480900 POTEMA6NI47 508 aa18.99■□□□□ 0.63
HSPG2-209ENST00000480900 IBSPP21815 317 aaPredicted RBP18.99■□□□□ 0.63
HSPG2-209ENST00000480900 SFPQP23246 707 aaKnown RBP eCLIP18.99■□□□□ 0.63
HSPG2-209ENST00000480900 MRPS5P82675 430 aaKnown RBP18.99■□□□□ 0.63
HSPG2-209ENST00000480900 ZNF174Q15697 407 aa18.99■□□□□ 0.63
HSPG2-209ENST00000480900 TJAP1Q5JTD0 557 aa18.99■□□□□ 0.63
HSPG2-209ENST00000480900 PSPC1Q8WXF1 523 aaKnown RBP18.99■□□□□ 0.63
HSPG2-209ENST00000480900 FDXACB1Q9BRP7 624 aaPredicted RBP18.99■□□□□ 0.63
HSPG2-209ENST00000480900 COL25A1Q9BXS0 654 aaPredicted RBP18.99■□□□□ 0.63
HSPG2-209ENST00000480900 ANKEF1Q9NU02 776 aa18.99■□□□□ 0.63
HSPG2-209ENST00000480900 COL4A3BPQ9Y5P4 624 aa18.99■□□□□ 0.63
HSPG2-209ENST00000480900 ZBTB39O15060 712 aa18.98■□□□□ 0.63
HSPG2-209ENST00000480900 GATMP50440 423 aa18.98■□□□□ 0.63
HSPG2-209ENST00000480900 PAN2Q504Q3 1202 aaKnown RBP18.98■□□□□ 0.63
HSPG2-209ENST00000480900 TIGD5Q53EQ6 642 aa18.98■□□□□ 0.63
HSPG2-209ENST00000480900 TCP11Q8WWU5 503 aa18.98■□□□□ 0.63
HSPG2-209ENST00000480900 P2RX5Q93086 422 aa18.98■□□□□ 0.63
HSPG2-209ENST00000480900 TMEM143Q96AN5 459 aa18.98■□□□□ 0.63
HSPG2-209ENST00000480900 NLRP4Q96MN2 994 aa18.98■□□□□ 0.63
HSPG2-209ENST00000480900 LMAN2LQ9H0V9 348 aa18.98■□□□□ 0.63
HSPG2-209ENST00000480900 ATP6V0A4Q9HBG4 840 aa18.98■□□□□ 0.63
HSPG2-209ENST00000480900 CHST12Q9NRB3 414 aa18.98■□□□□ 0.63
HSPG2-209ENST00000480900 DACT1Q9NYF0 836 aa18.98■□□□□ 0.63
HSPG2-209ENST00000480900 COG5Q9UP83 839 aa18.98■□□□□ 0.63
HSPG2-209ENST00000480900 HOXA2O43364 376 aa18.97■□□□□ 0.63
HSPG2-209ENST00000480900 CSDE1O75534 798 aaKnown RBP18.97■□□□□ 0.63
HSPG2-209ENST00000480900 XRCC6P12956 609 aaKnown RBP eCLIP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms