RNA–Protein interactions for RNA: ENST00000479930.5

TTC3-216, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 8,998 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-216ENST00000479930 LRRC8BQ6P9F7 803 aa9.56□□□□□ -0.88
TTC3-216ENST00000479930 TDRPQ86YL5 185 aa9.56□□□□□ -0.88
TTC3-216ENST00000479930 BRF1Q92994 677 aa9.56□□□□□ -0.88
TTC3-216ENST00000479930 H2AFJQ9BTM1 129 aa9.56□□□□□ -0.88
TTC3-216ENST00000479930 INTS13Q9NVM9 706 aa9.56□□□□□ -0.88
TTC3-216ENST00000479930 PNMA8BQ9ULN7 279 aaPredicted RBP9.56□□□□□ -0.88
TTC3-216ENST00000479930 DFFAO00273 331 aa9.55□□□□□ -0.88
TTC3-216ENST00000479930 MED7O43513 233 aa9.55□□□□□ -0.88
TTC3-216ENST00000479930 RPS7P62081 194 aaKnown RBP9.55□□□□□ -0.88
TTC3-216ENST00000479930 PSMC6P62333 389 aa9.55□□□□□ -0.88
TTC3-216ENST00000479930 ZNF668Q96K58 619 aaPredicted RBP9.55□□□□□ -0.88
TTC3-216ENST00000479930 MRPS26Q9BYN8 205 aaKnown RBP9.55□□□□□ -0.88
TTC3-216ENST00000479930 GINM1Q9NU53 330 aa9.55□□□□□ -0.88
TTC3-216ENST00000479930 FAM47AQ5JRC9 791 aa9.55□□□□□ -0.88
TTC3-216ENST00000479930 C21orf2O43822 256 aa9.55□□□□□ -0.88
TTC3-216ENST00000479930 C6P13671 934 aa9.55□□□□□ -0.88
TTC3-216ENST00000479930 ALOX15P16050 662 aaPredicted RBP9.55□□□□□ -0.88
TTC3-216ENST00000479930 RABGAP1LQ5R372 815 aa9.55□□□□□ -0.88
TTC3-216ENST00000479930 DEPDC1Q5TB30 811 aa9.55□□□□□ -0.88
TTC3-216ENST00000479930 SMC5Q8IY18 1101 aa9.55□□□□□ -0.88
TTC3-216ENST00000479930 TADA1Q96BN2 335 aa9.55□□□□□ -0.88
TTC3-216ENST00000479930 TAB2Q9NYJ8 693 aa9.55□□□□□ -0.88
TTC3-216ENST00000479930 RASSF10A6NK89 507 aa9.55□□□□□ -0.88
TTC3-216ENST00000479930 KCNK3O14649 394 aa9.55□□□□□ -0.88
TTC3-216ENST00000479930 SCGNO76038 276 aa9.55□□□□□ -0.88
TTC3-216ENST00000479930 FCGRTP55899 365 aa9.55□□□□□ -0.88
TTC3-216ENST00000479930 AP2B1P63010 937 aa9.55□□□□□ -0.88
TTC3-216ENST00000479930 CTTNQ14247 550 aaKnown RBP9.55□□□□□ -0.88
TTC3-216ENST00000479930 Q6ZUG5 572 aa9.55□□□□□ -0.88
TTC3-216ENST00000479930 RNF135Q8IUD6 432 aa9.55□□□□□ -0.88
TTC3-216ENST00000479930 STKLD1Q8NE28 680 aa9.55□□□□□ -0.88
TTC3-216ENST00000479930 TBCDQ9BTW9 1192 aa9.55□□□□□ -0.88
TTC3-216ENST00000479930 NCDNQ9UBB6 729 aa9.55□□□□□ -0.88
TTC3-216ENST00000479930 PHF20L1A8MW92 1017 aa9.55□□□□□ -0.88
TTC3-216ENST00000479930 SRGAP2O75044 1071 aa9.55□□□□□ -0.88
TTC3-216ENST00000479930 HUNKP57058 714 aa9.55□□□□□ -0.88
TTC3-216ENST00000479930 IL31Q6EBC2 164 aa9.55□□□□□ -0.88
TTC3-216ENST00000479930 ZNF235Q14590 738 aa9.55□□□□□ -0.88
TTC3-216ENST00000479930 CCDC183Q5T5S1 534 aa9.55□□□□□ -0.88
TTC3-216ENST00000479930 CES5AQ6NT32 575 aa9.55□□□□□ -0.88
TTC3-216ENST00000479930 HDDC2Q7Z4H3 204 aa9.55□□□□□ -0.88
TTC3-216ENST00000479930 MMGT1Q8N4V1 131 aa9.55□□□□□ -0.88
TTC3-216ENST00000479930 ABTB1Q969K4 478 aaPredicted RBP9.55□□□□□ -0.88
TTC3-216ENST00000479930 ZNF512Q96ME7 567 aaPredicted RBP9.55□□□□□ -0.88
TTC3-216ENST00000479930 NLNQ9BYT8 704 aa9.55□□□□□ -0.88
TTC3-216ENST00000479930 SLC13A1Q9BZW2 595 aa9.55□□□□□ -0.88
TTC3-216ENST00000479930 ZNF711Q9Y462 761 aa9.55□□□□□ -0.88
TTC3-216ENST00000479930 TNIKQ9UKE5 1360 aa9.55□□□□□ -0.88
TTC3-216ENST00000479930 TSPAN9O75954 239 aa9.55□□□□□ -0.88
TTC3-216ENST00000479930 CREB1P16220 341 aa9.55□□□□□ -0.88
TTC3-216ENST00000479930 JAK1P23458 1154 aa9.55□□□□□ -0.88
TTC3-216ENST00000479930 BDH1Q02338 343 aa9.55□□□□□ -0.88
TTC3-216ENST00000479930 MKRN4PQ13434 485 aaPredicted RBP9.55□□□□□ -0.88
TTC3-216ENST00000479930 MUM1Q2TAK8 710 aa9.55□□□□□ -0.88
TTC3-216ENST00000479930 SGO2Q562F6 1265 aa9.55□□□□□ -0.88
TTC3-216ENST00000479930 LRRC46Q96FV0 321 aa9.55□□□□□ -0.88
TTC3-216ENST00000479930 AMNQ9BXJ7 453 aa9.55□□□□□ -0.88
TTC3-216ENST00000479930 SIK2Q9H0K1 926 aa9.55□□□□□ -0.88
TTC3-216ENST00000479930 AASDHPPTQ9NRN7 309 aa9.55□□□□□ -0.88
TTC3-216ENST00000479930 POC1B-GALNT4F8VUJ3 575 aa9.54□□□□□ -0.88
TTC3-216ENST00000479930 CCNT2O60583 730 aaKnown RBP9.54□□□□□ -0.88
TTC3-216ENST00000479930 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.54□□□□□ -0.88
TTC3-216ENST00000479930 PCGF5Q86SE9 256 aa9.54□□□□□ -0.88
TTC3-216ENST00000479930 BTBD9Q96Q07 612 aa9.54□□□□□ -0.88
TTC3-216ENST00000479930 STXBP1P61764 594 aaKnown RBP9.54□□□□□ -0.88
TTC3-216ENST00000479930 LLGL2Q6P1M3 1020 aa9.54□□□□□ -0.88
TTC3-216ENST00000479930 TRIM42Q8IWZ5 723 aa9.54□□□□□ -0.88
TTC3-216ENST00000479930 ST13P5Q8NFI4 369 aaPredicted RBP9.54□□□□□ -0.88
TTC3-216ENST00000479930 TRIM15Q9C019 465 aa9.54□□□□□ -0.88
TTC3-216ENST00000479930 TMEM39AQ9NV64 488 aa9.54□□□□□ -0.88
TTC3-216ENST00000479930 KIF21BO75037 1637 aa9.54□□□□□ -0.88
TTC3-216ENST00000479930 CROCCQ5TZA2 2017 aa9.54□□□□□ -0.88
TTC3-216ENST00000479930 CTTNBP2Q8WZ74 1663 aa9.54□□□□□ -0.88
TTC3-216ENST00000479930 TARSL2A2RTX5 802 aaKnown RBP9.54□□□□□ -0.88
TTC3-216ENST00000479930 HNRNPDLO14979 420 aaKnown RBP9.54□□□□□ -0.88
TTC3-216ENST00000479930 RASSF9O75901 435 aa9.54□□□□□ -0.88
TTC3-216ENST00000479930 MCF2P10911 925 aa9.54□□□□□ -0.88
TTC3-216ENST00000479930 STX2P32856 288 aa9.54□□□□□ -0.88
TTC3-216ENST00000479930 RC3H1Q5TC82 1133 aaKnown RBP9.54□□□□□ -0.88
TTC3-216ENST00000479930 ANO1Q5XXA6 986 aa9.54□□□□□ -0.88
TTC3-216ENST00000479930 SRRM1Q8IYB3 904 aaKnown RBP9.54□□□□□ -0.88
TTC3-216ENST00000479930 KLHL28Q9NXS3 571 aa9.54□□□□□ -0.88
TTC3-216ENST00000479930 PRPSAP2O60256 369 aa9.54□□□□□ -0.88
TTC3-216ENST00000479930 SGCGQ13326 291 aa9.54□□□□□ -0.88
TTC3-216ENST00000479930 CCINQ13939 588 aa9.54□□□□□ -0.88
TTC3-216ENST00000479930 CCDC149Q6ZUS6 474 aa9.54□□□□□ -0.88
TTC3-216ENST00000479930 HORMAD1Q86X24 394 aa9.54□□□□□ -0.88
TTC3-216ENST00000479930 GRK7Q8WTQ7 553 aa9.54□□□□□ -0.88
TTC3-216ENST00000479930 CLIP3Q96DZ5 547 aa9.54□□□□□ -0.88
TTC3-216ENST00000479930 CYTH3O43739 400 aa9.54□□□□□ -0.88
TTC3-216ENST00000479930 GDF11O95390 407 aa9.54□□□□□ -0.88
TTC3-216ENST00000479930 C6orf222P0C671 652 aaPredicted RBP9.54□□□□□ -0.88
TTC3-216ENST00000479930 MYBL2P10244 700 aa9.54□□□□□ -0.88
TTC3-216ENST00000479930 RAG1P15918 1043 aa9.54□□□□□ -0.88
TTC3-216ENST00000479930 KCNA2P16389 499 aa9.54□□□□□ -0.88
TTC3-216ENST00000479930 AMD1P17707 334 aa9.54□□□□□ -0.88
TTC3-216ENST00000479930 CEP78Q5JTW2 689 aa9.54□□□□□ -0.88
TTC3-216ENST00000479930 NLGN1Q8N2Q7 840 aa9.54□□□□□ -0.88
TTC3-216ENST00000479930 EIF3DO15371 548 aaKnown RBP eCLIP9.54□□□□□ -0.889e-7■□□□□ 10.5
TTC3-216ENST00000479930 RARBP10826 455 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms