RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 CTDNEP1O95476 244 aa16.1■□□□□ 0.17
ATG4B-218ENST00000479554 ZSCAN20P17040 1043 aaPredicted RBP16.1■□□□□ 0.17
ATG4B-218ENST00000479554 CAMK1Q14012 370 aa16.1■□□□□ 0.17
ATG4B-218ENST00000479554 PIK3AP1Q6ZUJ8 805 aa16.1■□□□□ 0.17
ATG4B-218ENST00000479554 SPPL3Q8TCT6 385 aa16.1■□□□□ 0.17
ATG4B-218ENST00000479554 POF1BQ8WVV4 589 aa16.1■□□□□ 0.17
ATG4B-218ENST00000479554 FAM20AQ96MK3 541 aa16.1■□□□□ 0.17
ATG4B-218ENST00000479554 NAP1L4Q99733 375 aaKnown RBP16.1■□□□□ 0.17
ATG4B-218ENST00000479554 C1QTNF1Q9BXJ1 281 aa16.1■□□□□ 0.17
ATG4B-218ENST00000479554 KCNMB3Q9NPA1 279 aa16.1■□□□□ 0.17
ATG4B-218ENST00000479554 FAM50BQ9Y247 325 aa16.1■□□□□ 0.17
ATG4B-218ENST00000479554 PCDHB12Q9Y5F1 795 aa16.1■□□□□ 0.17
ATG4B-218ENST00000479554 HOXA2O43364 376 aa16.09■□□□□ 0.17
ATG4B-218ENST00000479554 CCNT1O60563 726 aaKnown RBP16.09■□□□□ 0.17
ATG4B-218ENST00000479554 STBD1O95210 358 aa16.09■□□□□ 0.17
ATG4B-218ENST00000479554 FGFR1P11362 822 aa16.09■□□□□ 0.17
ATG4B-218ENST00000479554 DARSP14868 501 aaKnown RBP16.09■□□□□ 0.17
ATG4B-218ENST00000479554 DNAJB1P25685 340 aa16.09■□□□□ 0.17
ATG4B-218ENST00000479554 DNM2P50570 870 aa16.09■□□□□ 0.17
ATG4B-218ENST00000479554 PSMC5P62195 406 aa16.09■□□□□ 0.17
ATG4B-218ENST00000479554 FAM189BP81408 668 aa16.09■□□□□ 0.17
ATG4B-218ENST00000479554 PPP2R5CQ13362 524 aa16.09■□□□□ 0.17
ATG4B-218ENST00000479554 DRP2Q13474 957 aa16.09■□□□□ 0.17
ATG4B-218ENST00000479554 CTC1Q2NKJ3 1217 aa16.09■□□□□ 0.17
ATG4B-218ENST00000479554 PPP4R3AQ6IN85 833 aa16.09■□□□□ 0.17
ATG4B-218ENST00000479554 FAM178BQ8IXR5 827 aa16.09■□□□□ 0.17
ATG4B-218ENST00000479554 NECAB1Q8N987 351 aa16.09■□□□□ 0.17
ATG4B-218ENST00000479554 OXER1Q8TDS5 423 aa16.09■□□□□ 0.17
ATG4B-218ENST00000479554 GTF3C6Q969F1 213 aa16.09■□□□□ 0.17
ATG4B-218ENST00000479554 TBC1D32Q96NH3 1257 aa16.09■□□□□ 0.17
ATG4B-218ENST00000479554 SH2D3AQ9BRG2 576 aa16.09■□□□□ 0.17
ATG4B-218ENST00000479554 IGFLR1Q9H665 355 aa16.09■□□□□ 0.17
ATG4B-218ENST00000479554 BRMS1Q9HCU9 246 aa16.09■□□□□ 0.17
ATG4B-218ENST00000479554 VAV3Q9UKW4 847 aa16.09■□□□□ 0.17
ATG4B-218ENST00000479554 PLXNA4Q9HCM2 1894 aa16.08■□□□□ 0.17
ATG4B-218ENST00000479554 DDX11L8A8MPP1 907 aa16.08■□□□□ 0.16
ATG4B-218ENST00000479554 EML1O00423 815 aa16.08■□□□□ 0.16
ATG4B-218ENST00000479554 MARCH6O60337 910 aa16.08■□□□□ 0.16
ATG4B-218ENST00000479554 DKC1O60832 514 aaKnown RBP eCLIP16.08■□□□□ 0.16
ATG4B-218ENST00000479554 LARGE1O95461 756 aa16.08■□□□□ 0.16
ATG4B-218ENST00000479554 COL9A1P20849 921 aa16.08■□□□□ 0.16
ATG4B-218ENST00000479554 FGFR4P22455 802 aa16.08■□□□□ 0.16
ATG4B-218ENST00000479554 SSTR3P32745 418 aaPredicted RBP16.08■□□□□ 0.16
ATG4B-218ENST00000479554 IRS1P35568 1242 aa16.08■□□□□ 0.16
ATG4B-218ENST00000479554 KRT2P35908 639 aa16.08■□□□□ 0.16
ATG4B-218ENST00000479554 LTBRP36941 435 aa16.08■□□□□ 0.16
ATG4B-218ENST00000479554 CSPP1Q1MSJ5 1256 aa16.08■□□□□ 0.16
ATG4B-218ENST00000479554 ABI1Q8IZP0 508 aa16.08■□□□□ 0.16
ATG4B-218ENST00000479554 IPO9Q96P70 1041 aaKnown RBP16.08■□□□□ 0.16
ATG4B-218ENST00000479554 CEP89Q96ST8 783 aa16.08■□□□□ 0.16
ATG4B-218ENST00000479554 GCOM2Q9BZD3 368 aaPredicted RBP16.08■□□□□ 0.16
ATG4B-218ENST00000479554 TMEM117Q9H0C3 514 aa16.08■□□□□ 0.16
ATG4B-218ENST00000479554 CD320Q9NPF0 282 aa16.08■□□□□ 0.16
ATG4B-218ENST00000479554 TYW1Q9NV66 732 aaKnown RBP16.08■□□□□ 0.16
ATG4B-218ENST00000479554 HCSTQ9UBK5 93 aa16.08■□□□□ 0.16
ATG4B-218ENST00000479554 C5orf42Q9H799 3197 aa16.08■□□□□ 0.16
ATG4B-218ENST00000479554 MYO7AQ13402 2215 aa16.07■□□□□ 0.16
ATG4B-218ENST00000479554 IGKV6-21A0A0C4DH24 114 aa16.07■□□□□ 0.16
ATG4B-218ENST00000479554 TBX3O15119 743 aa16.07■□□□□ 0.16
ATG4B-218ENST00000479554 MAFO75444 373 aaPredicted RBP16.07■□□□□ 0.16
ATG4B-218ENST00000479554 LAG3P18627 525 aa16.07■□□□□ 0.16
ATG4B-218ENST00000479554 GTF2F1P35269 517 aaKnown RBP eCLIP16.07■□□□□ 0.162e-8■■■■■ 34.1
ATG4B-218ENST00000479554 QARSP47897 775 aaKnown RBP16.07■□□□□ 0.16
ATG4B-218ENST00000479554 CDC42EP1Q00587 391 aa16.07■□□□□ 0.16
ATG4B-218ENST00000479554 UBE3AQ05086 875 aa16.07■□□□□ 0.16
ATG4B-218ENST00000479554 CLUL1Q15846 466 aa16.07■□□□□ 0.16
ATG4B-218ENST00000479554 ME3Q16798 604 aa16.07■□□□□ 0.16
ATG4B-218ENST00000479554 PLA2G4FQ68DD2 849 aa16.07■□□□□ 0.16
ATG4B-218ENST00000479554 ANO5Q75V66 913 aa16.07■□□□□ 0.16
ATG4B-218ENST00000479554 ADGRD2Q7Z7M1 963 aa16.07■□□□□ 0.16
ATG4B-218ENST00000479554 ECHDC2Q86YB7 292 aa16.07■□□□□ 0.16
ATG4B-218ENST00000479554 POTEDQ86YR6 584 aa16.07■□□□□ 0.16
ATG4B-218ENST00000479554 THNSL1Q8IYQ7 743 aa16.07■□□□□ 0.16
ATG4B-218ENST00000479554 GJD3Q8N144 294 aa16.07■□□□□ 0.16
ATG4B-218ENST00000479554 COLGALT1Q8NBJ5 622 aa16.07■□□□□ 0.16
ATG4B-218ENST00000479554 RNF169Q8NCN4 708 aa16.07■□□□□ 0.16
ATG4B-218ENST00000479554 JPH2Q9BR39 696 aaPredicted RBP16.07■□□□□ 0.16
ATG4B-218ENST00000479554 EPHX3Q9H6B9 360 aa16.07■□□□□ 0.16
ATG4B-218ENST00000479554 LINC01565O15544 149 aa16.06■□□□□ 0.16
ATG4B-218ENST00000479554 TBX10O75333 385 aa16.06■□□□□ 0.16
ATG4B-218ENST00000479554 CSDE1O75534 798 aaKnown RBP16.06■□□□□ 0.16
ATG4B-218ENST00000479554 FGF18O76093 207 aa16.06■□□□□ 0.16
ATG4B-218ENST00000479554 P4HBP07237 508 aaKnown RBP16.06■□□□□ 0.16
ATG4B-218ENST00000479554 FDPSP14324 419 aaKnown RBP16.06■□□□□ 0.16
ATG4B-218ENST00000479554 NDUFV1P49821 464 aa16.06■□□□□ 0.16
ATG4B-218ENST00000479554 NEK4P51957 841 aa16.06■□□□□ 0.16
ATG4B-218ENST00000479554 DLX2Q07687 328 aaPredicted RBP16.06■□□□□ 0.16
ATG4B-218ENST00000479554 NR5A1Q13285 461 aa16.06■□□□□ 0.16
ATG4B-218ENST00000479554 EARS2Q5JPH6 523 aaKnown RBP16.06■□□□□ 0.16
ATG4B-218ENST00000479554 ZNF410Q86VK4 478 aa16.06■□□□□ 0.16
ATG4B-218ENST00000479554 RHPN2Q8IUC4 686 aa16.06■□□□□ 0.16
ATG4B-218ENST00000479554 LRRC43Q8N309 656 aa16.06■□□□□ 0.16
ATG4B-218ENST00000479554 NSUN7Q8NE18 718 aaKnown RBP16.06■□□□□ 0.16
ATG4B-218ENST00000479554 KHSRPQ92945 711 aaKnown RBP eCLIP16.06■□□□□ 0.163e-7■■□□□ 12.3
ATG4B-218ENST00000479554 CASD1Q96PB1 797 aa16.06■□□□□ 0.16
ATG4B-218ENST00000479554 CWH43Q9H720 699 aa16.06■□□□□ 0.16
ATG4B-218ENST00000479554 CYP26B1Q9NR63 512 aa16.06■□□□□ 0.16
ATG4B-218ENST00000479554 TLR9Q9NR96 1032 aa16.06■□□□□ 0.16
ATG4B-218ENST00000479554 RNF19AQ9NV58 838 aa16.06■□□□□ 0.16
ATG4B-218ENST00000479554 DACT1Q9NYF0 836 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms