RNA–Protein interactions for RNA: ENST00000478932.1

USP25-208, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best)

Gene USP25, Length 2,605 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-208ENST00000478932 PNMA6AP0CW24 399 aaPredicted RBP4.52□□□□□ -1.69
USP25-208ENST00000478932 MUTP22033 750 aa4.52□□□□□ -1.69
USP25-208ENST00000478932 HOXA7P31268 230 aaPredicted RBP4.52□□□□□ -1.69
USP25-208ENST00000478932 SFNP31947 248 aa4.52□□□□□ -1.69
USP25-208ENST00000478932 EIF4A3P38919 411 aaKnown RBP4.52□□□□□ -1.69
USP25-208ENST00000478932 JAK3P52333 1124 aa4.52□□□□□ -1.69
USP25-208ENST00000478932 DLG4P78352 724 aa4.52□□□□□ -1.69
USP25-208ENST00000478932 GFPT1Q06210 699 aaPredicted RBP4.52□□□□□ -1.69
USP25-208ENST00000478932 EXOC3L4Q17RC7 722 aa4.52□□□□□ -1.69
USP25-208ENST00000478932 BMT2Q1RMZ1 405 aa4.52□□□□□ -1.69
USP25-208ENST00000478932 GNPTABQ3T906 1256 aa4.52□□□□□ -1.69
USP25-208ENST00000478932 TMEM63BQ5T3F8 832 aa4.52□□□□□ -1.69
USP25-208ENST00000478932 XRRA1Q6P2D8 792 aa4.52□□□□□ -1.69
USP25-208ENST00000478932 GJB7Q6PEY0 223 aa4.52□□□□□ -1.69
USP25-208ENST00000478932 USP50Q70EL3 339 aaPredicted RBP4.52□□□□□ -1.69
USP25-208ENST00000478932 FRMD5Q7Z6J6 570 aa4.52□□□□□ -1.69
USP25-208ENST00000478932 PRRT2Q7Z6L0 340 aaPredicted RBP4.52□□□□□ -1.69
USP25-208ENST00000478932 SAMD3Q8N6K7 520 aa4.52□□□□□ -1.69
USP25-208ENST00000478932 ZC3H15Q8WU90 426 aaKnown RBP4.52□□□□□ -1.69
USP25-208ENST00000478932 GPRASP2Q96D09 838 aa4.52□□□□□ -1.69
USP25-208ENST00000478932 BORCS6Q96GS4 357 aa4.52□□□□□ -1.69
USP25-208ENST00000478932 L3MBTL3Q96JM7 780 aaPredicted RBP4.52□□□□□ -1.69
USP25-208ENST00000478932 CBWD1Q9BRT8 395 aa4.52□□□□□ -1.69
USP25-208ENST00000478932 LSM14BQ9BX40 385 aaKnown RBP4.52□□□□□ -1.69
USP25-208ENST00000478932 CARD6Q9BX69 1037 aa4.52□□□□□ -1.69
USP25-208ENST00000478932 EPC1Q9H2F5 836 aa4.52□□□□□ -1.69
USP25-208ENST00000478932 DEF6Q9H4E7 631 aa4.52□□□□□ -1.69
USP25-208ENST00000478932 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.52□□□□□ -1.69
USP25-208ENST00000478932 SEL1LQ9UBV2 794 aa4.52□□□□□ -1.69
USP25-208ENST00000478932 ADAMTS1Q9UHI8 967 aa4.52□□□□□ -1.69
USP25-208ENST00000478932 DBR1Q9UK59 544 aaKnown RBP4.52□□□□□ -1.69
USP25-208ENST00000478932 PHLPP2Q6ZVD8 1323 aa4.52□□□□□ -1.69
USP25-208ENST00000478932 DOCK1Q14185 1865 aa4.52□□□□□ -1.69
USP25-208ENST00000478932 A0A1W2PQJ5 194 aa4.52□□□□□ -1.69
USP25-208ENST00000478932 GOLGA8IPA6NC78 632 aa4.52□□□□□ -1.69
USP25-208ENST00000478932 GOLGA8JA6NMD2 632 aa4.52□□□□□ -1.69
USP25-208ENST00000478932 EIF3DO15371 548 aaKnown RBP eCLIP4.52□□□□□ -1.69
USP25-208ENST00000478932 PPP1R37O75864 691 aa4.52□□□□□ -1.69
USP25-208ENST00000478932 SLU7O95391 586 aaKnown RBP4.52□□□□□ -1.69
USP25-208ENST00000478932 PLS3P13797 630 aa4.52□□□□□ -1.69
USP25-208ENST00000478932 UCHL3P15374 230 aa4.52□□□□□ -1.69
USP25-208ENST00000478932 PON1P27169 355 aa4.52□□□□□ -1.69
USP25-208ENST00000478932 HNRNPH3P31942 346 aaKnown RBP4.52□□□□□ -1.69
USP25-208ENST00000478932 PSMC2P35998 433 aaKnown RBP4.52□□□□□ -1.69
USP25-208ENST00000478932 GJA5P36382 358 aa4.52□□□□□ -1.69
USP25-208ENST00000478932 NPTX2P47972 431 aa4.52□□□□□ -1.69
USP25-208ENST00000478932 RAPGEF1Q13905 1077 aa4.52□□□□□ -1.69
USP25-208ENST00000478932 ELF2Q15723 593 aa4.52□□□□□ -1.69
USP25-208ENST00000478932 LY6KQ17RY6 165 aa4.52□□□□□ -1.69
USP25-208ENST00000478932 CBWD6Q4V339 395 aa4.52□□□□□ -1.69
USP25-208ENST00000478932 TDRD12Q587J7 1177 aaKnown RBP4.52□□□□□ -1.69
USP25-208ENST00000478932 CBWD3Q5JTY5 395 aa4.52□□□□□ -1.69
USP25-208ENST00000478932 CBWD5Q5RIA9 395 aa4.52□□□□□ -1.69
USP25-208ENST00000478932 HGSNATQ68CP4 663 aa4.52□□□□□ -1.69
USP25-208ENST00000478932 ZNF746Q6NUN9 644 aaPredicted RBP4.52□□□□□ -1.69
USP25-208ENST00000478932 KIAA1328Q86T90 577 aa4.52□□□□□ -1.69
USP25-208ENST00000478932 DNAAF5Q86Y56 855 aa4.52□□□□□ -1.69
USP25-208ENST00000478932 ZC3H3Q8IXZ2 948 aaKnown RBP4.52□□□□□ -1.69
USP25-208ENST00000478932 FAM186BQ8IYM0 893 aa4.52□□□□□ -1.69
USP25-208ENST00000478932 SLC35F6Q8N357 371 aa4.52□□□□□ -1.69
USP25-208ENST00000478932 FAM133AQ8N9E0 248 aa4.52□□□□□ -1.69
USP25-208ENST00000478932 CHST13Q8NET6 341 aa4.52□□□□□ -1.69
USP25-208ENST00000478932 NEK9Q8TD19 979 aa4.52□□□□□ -1.69
USP25-208ENST00000478932 BSNDQ8WZ55 320 aa4.52□□□□□ -1.69
USP25-208ENST00000478932 SLC10A4Q96EP9 437 aa4.52□□□□□ -1.69
USP25-208ENST00000478932 STRA6Q9BX79 667 aa4.52□□□□□ -1.69
USP25-208ENST00000478932 IFIH1Q9BYX4 1025 aaKnown RBP4.52□□□□□ -1.69
USP25-208ENST00000478932 PORCNQ9H237 461 aa4.52□□□□□ -1.69
USP25-208ENST00000478932 HDAC6Q9UBN7 1215 aa4.52□□□□□ -1.69
USP25-208ENST00000478932 FAM184BQ9ULE4 1060 aa4.52□□□□□ -1.69
USP25-208ENST00000478932 FRMD4BQ9Y2L6 1034 aa4.52□□□□□ -1.69
USP25-208ENST00000478932 PFASO15067 1338 aa4.51□□□□□ -1.69
USP25-208ENST00000478932 MYPNQ86TC9 1320 aa4.51□□□□□ -1.69
USP25-208ENST00000478932 DICER1Q9UPY3 1922 aaKnown RBP4.51□□□□□ -1.69
USP25-208ENST00000478932 A0A087X0T9 212 aa4.51□□□□□ -1.69
USP25-208ENST00000478932 RBAK-RBAKDNI3L0D1 243 aa4.51□□□□□ -1.69
USP25-208ENST00000478932 CXCL11O14625 94 aa4.51□□□□□ -1.69
USP25-208ENST00000478932 STBD1O95210 358 aa4.51□□□□□ -1.69
USP25-208ENST00000478932 LYPLA2O95372 231 aa4.51□□□□□ -1.69
USP25-208ENST00000478932 AFPP02771 609 aaKnown RBP4.51□□□□□ -1.69
USP25-208ENST00000478932 TUBB4AP04350 444 aa4.51□□□□□ -1.69
USP25-208ENST00000478932 PSAPP07602 524 aa4.51□□□□□ -1.69
USP25-208ENST00000478932 FAM228BP0C875 321 aa4.51□□□□□ -1.69
USP25-208ENST00000478932 EPB41P11171 864 aaKnown RBP4.51□□□□□ -1.69
USP25-208ENST00000478932 ATP4AP20648 1035 aa4.51□□□□□ -1.69
USP25-208ENST00000478932 CNGA1P29973 690 aa4.51□□□□□ -1.69
USP25-208ENST00000478932 ADSSP30520 456 aa4.51□□□□□ -1.69
USP25-208ENST00000478932 ALDH5A1P51649 535 aaPredicted RBP4.51□□□□□ -1.69
USP25-208ENST00000478932 KIF11P52732 1056 aa4.51□□□□□ -1.69
USP25-208ENST00000478932 KRT83P78385 493 aa4.51□□□□□ -1.69
USP25-208ENST00000478932 PRKCEQ02156 737 aa4.51□□□□□ -1.69
USP25-208ENST00000478932 MOGSQ13724 837 aa4.51□□□□□ -1.69
USP25-208ENST00000478932 SPA17Q15506 151 aa4.51□□□□□ -1.69
USP25-208ENST00000478932 HSDL1Q3SXM5 330 aa4.51□□□□□ -1.69
USP25-208ENST00000478932 MTERF2Q49AM1 385 aa4.51□□□□□ -1.69
USP25-208ENST00000478932 ABHD15Q6UXT9 468 aa4.51□□□□□ -1.69
USP25-208ENST00000478932 STXBP4Q6ZWJ1 553 aa4.51□□□□□ -1.69
USP25-208ENST00000478932 OTUD6AQ7L8S5 288 aa4.51□□□□□ -1.69
USP25-208ENST00000478932 RIOX2Q8IUF8 465 aa4.51□□□□□ -1.69
USP25-208ENST00000478932 CCDC170Q8IYT3 715 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms