RNA–Protein interactions for RNA: ENST00000478459.5

EPHB4-205, Transcript of EPH receptor B4, humanhuman

TSL 2

Gene EPHB4, Length 965 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-205ENST00000478459 RGS18Q9NS28 235 aa21.39■■□□□ 1.01
EPHB4-205ENST00000478459 BRWD1Q9NSI6 2320 aa21.39■■□□□ 1.01
EPHB4-205ENST00000478459 A0A087WZ62 844 aa21.38■■□□□ 1.01
EPHB4-205ENST00000478459 BAG4O95429 457 aaKnown RBP21.38■■□□□ 1.01
EPHB4-205ENST00000478459 TXKP42681 527 aa21.38■■□□□ 1.01
EPHB4-205ENST00000478459 QARSP47897 775 aaKnown RBP21.38■■□□□ 1.01
EPHB4-205ENST00000478459 CALCRLQ16602 461 aa21.38■■□□□ 1.01
EPHB4-205ENST00000478459 LONRF3Q496Y0 759 aa21.38■■□□□ 1.01
EPHB4-205ENST00000478459 TCEAL5Q5H9L2 206 aa21.38■■□□□ 1.01
EPHB4-205ENST00000478459 CRIPAKQ8N1N5 446 aa21.38■■□□□ 1.01
EPHB4-205ENST00000478459 CEP89Q96ST8 783 aa21.38■■□□□ 1.01
EPHB4-205ENST00000478459 FDXACB1Q9BRP7 624 aaPredicted RBP21.38■■□□□ 1.01
EPHB4-205ENST00000478459 LXNQ9BS40 222 aa21.38■■□□□ 1.01
EPHB4-205ENST00000478459 SUCLA2Q9P2R7 463 aaPredicted RBP21.38■■□□□ 1.01
EPHB4-205ENST00000478459 TTC28Q96AY4 2481 aa21.37■■□□□ 1.01
EPHB4-205ENST00000478459 EIF4BP23588 611 aaKnown RBP21.37■■□□□ 1.01
EPHB4-205ENST00000478459 PTPROQ16827 1216 aa21.37■■□□□ 1.01
EPHB4-205ENST00000478459 TPH2Q8IWU9 490 aa21.37■■□□□ 1.01
EPHB4-205ENST00000478459 C8orf76Q96K31 380 aa21.37■■□□□ 1.01
EPHB4-205ENST00000478459 CEP170P1Q96L14 293 aa21.37■■□□□ 1.01
EPHB4-205ENST00000478459 NLRP4Q96MN2 994 aa21.37■■□□□ 1.01
EPHB4-205ENST00000478459 UHRF1Q96T88 793 aaPredicted RBP21.37■■□□□ 1.01
EPHB4-205ENST00000478459 LMCD1Q9NZU5 365 aa21.37■■□□□ 1.01
EPHB4-205ENST00000478459 C9IYK1 514 aa21.36■■□□□ 1.01
EPHB4-205ENST00000478459 DARSP14868 501 aaKnown RBP21.36■■□□□ 1.01
EPHB4-205ENST00000478459 KCNA5P22460 613 aa21.36■■□□□ 1.01
EPHB4-205ENST00000478459 MCM7P33993 719 aa21.36■■□□□ 1.01
EPHB4-205ENST00000478459 DSC3Q14574 896 aa21.36■■□□□ 1.01
EPHB4-205ENST00000478459 EPHA7Q15375 998 aa21.36■■□□□ 1.01
EPHB4-205ENST00000478459 SLC24A5Q71RS6 500 aa21.36■■□□□ 1.01
EPHB4-205ENST00000478459 CMTR2Q8IYT2 770 aaKnown RBP21.36■■□□□ 1.01
EPHB4-205ENST00000478459 TMEM143Q96AN5 459 aa21.36■■□□□ 1.01
EPHB4-205ENST00000478459 NAP1L4Q99733 375 aaKnown RBP21.36■■□□□ 1.01
EPHB4-205ENST00000478459 TMEM60Q9H2L4 133 aa21.36■■□□□ 1.01
EPHB4-205ENST00000478459 IGFLR1Q9H665 355 aa21.36■■□□□ 1.01
EPHB4-205ENST00000478459 CYP26B1Q9NR63 512 aa21.36■■□□□ 1.01
EPHB4-205ENST00000478459 PCDHGC5Q9Y5F6 944 aa21.36■■□□□ 1.01
EPHB4-205ENST00000478459 NEMFO60524 1076 aa21.35■■□□□ 1.01
EPHB4-205ENST00000478459 MAFO75444 373 aaPredicted RBP21.35■■□□□ 1.01
EPHB4-205ENST00000478459 P4HBP07237 508 aaKnown RBP21.35■■□□□ 1.01
EPHB4-205ENST00000478459 BMP1P13497 986 aa21.35■■□□□ 1.01
EPHB4-205ENST00000478459 ZSCAN20P17040 1043 aaPredicted RBP21.35■■□□□ 1.01
EPHB4-205ENST00000478459 DNM2P50570 870 aa21.35■■□□□ 1.01
EPHB4-205ENST00000478459 SPIRE1Q08AE8 756 aa21.35■■□□□ 1.01
EPHB4-205ENST00000478459 XKR9Q5GH70 373 aa21.35■■□□□ 1.01
EPHB4-205ENST00000478459 ODR4Q5SWX8 454 aa21.35■■□□□ 1.01
EPHB4-205ENST00000478459 FAM184AQ8NB25 1140 aa21.35■■□□□ 1.01
EPHB4-205ENST00000478459 KLHL23Q8NBE8 558 aa21.35■■□□□ 1.01
EPHB4-205ENST00000478459 CLP1Q92989 425 aaKnown RBP21.35■■□□□ 1.01
EPHB4-205ENST00000478459 UBE2ZQ9H832 354 aaPredicted RBP21.35■■□□□ 1.01
EPHB4-205ENST00000478459 TTC12Q9H892 705 aaPredicted RBP21.35■■□□□ 1.01
EPHB4-205ENST00000478459 ATP6V0A4Q9HBG4 840 aa21.35■■□□□ 1.01
EPHB4-205ENST00000478459 COG5Q9UP83 839 aa21.35■■□□□ 1.01
EPHB4-205ENST00000478459 POTEMA6NI47 508 aa21.34■■□□□ 1.01
EPHB4-205ENST00000478459 H3BQ06 376 aaPredicted RBP21.34■■□□□ 1.01
EPHB4-205ENST00000478459 TBX3O15119 743 aa21.34■■□□□ 1.01
EPHB4-205ENST00000478459 SRGAP2CP0DJJ0 459 aa21.34■■□□□ 1.01
EPHB4-205ENST00000478459 DNAJB1P25685 340 aa21.34■■□□□ 1.01
EPHB4-205ENST00000478459 YWHABP31946 246 aaKnown RBP21.34■■□□□ 1.01
EPHB4-205ENST00000478459 GTF2F1P35269 517 aaKnown RBP eCLIP21.34■■□□□ 1.01
EPHB4-205ENST00000478459 POLGP54098 1239 aaPredicted RBP21.34■■□□□ 1.01
EPHB4-205ENST00000478459 NBR1Q14596 966 aa21.34■■□□□ 1.01
EPHB4-205ENST00000478459 SAFBQ15424 915 aaKnown RBP eCLIP21.34■■□□□ 1.01
EPHB4-205ENST00000478459 ZNF174Q15697 407 aa21.34■■□□□ 1.01
EPHB4-205ENST00000478459 SLFN12Q8IYM2 578 aa21.34■■□□□ 1.01
EPHB4-205ENST00000478459 EIF2AK1Q9BQI3 630 aaKnown RBP21.34■■□□□ 1.01
EPHB4-205ENST00000478459 C11orf84Q9BUA3 381 aaPredicted RBP21.34■■□□□ 1.01
EPHB4-205ENST00000478459 GCOM2Q9BZD3 368 aaPredicted RBP21.34■■□□□ 1.01
EPHB4-205ENST00000478459 C1orf112Q9NSG2 853 aa21.34■■□□□ 1.01
EPHB4-205ENST00000478459 PCDHA12Q9UN75 941 aa21.34■■□□□ 1.01
EPHB4-205ENST00000478459 IGKV6-21A0A0C4DH24 114 aa21.33■■□□□ 1.01
EPHB4-205ENST00000478459 C5orf67F2Z3F1 127 aa21.33■■□□□ 1.01
EPHB4-205ENST00000478459 ITGB1P05556 798 aa21.33■■□□□ 1.01
EPHB4-205ENST00000478459 PBX3P40426 434 aa21.33■■□□□ 1.01
EPHB4-205ENST00000478459 GNL2Q13823 731 aaKnown RBP21.33■■□□□ 1.01
EPHB4-205ENST00000478459 CLUL1Q15846 466 aa21.33■■□□□ 1.01
EPHB4-205ENST00000478459 AAK1Q2M2I8 961 aa21.33■■□□□ 1.01
EPHB4-205ENST00000478459 ZSCAN31Q96LW9 406 aaPredicted RBP21.33■■□□□ 1.01
EPHB4-205ENST00000478459 NSUN3Q9H649 340 aaKnown RBP21.33■■□□□ 1.01
EPHB4-205ENST00000478459 TYW1Q9NV66 732 aaKnown RBP21.33■■□□□ 1.01
EPHB4-205ENST00000478459 PLAGL2Q9UPG8 496 aa21.33■■□□□ 1.01
EPHB4-205ENST00000478459 BDP1A6H8Y1 2624 aa21.32■■□□□ 1
EPHB4-205ENST00000478459 RB1P06400 928 aa21.32■■□□□ 1
EPHB4-205ENST00000478459 IRS1P35568 1242 aa21.32■■□□□ 1
EPHB4-205ENST00000478459 TIGD5Q53EQ6 642 aa21.32■■□□□ 1
EPHB4-205ENST00000478459 PRPF31Q8WWY3 499 aaKnown RBP21.32■■□□□ 1
EPHB4-205ENST00000478459 LPPQ93052 612 aa21.32■■□□□ 1
EPHB4-205ENST00000478459 RNF19AQ9NV58 838 aa21.32■■□□□ 1
EPHB4-205ENST00000478459 TMEM161AQ9NX61 479 aa21.32■■□□□ 1
EPHB4-205ENST00000478459 CLDND1Q9NY35 253 aa21.32■■□□□ 1
EPHB4-205ENST00000478459 RWDD3Q9Y3V2 267 aa21.32■■□□□ 1
EPHB4-205ENST00000478459 C5orf42Q9H799 3197 aa21.32■■□□□ 1
EPHB4-205ENST00000478459 MUC3AQ02505 3323 aa21.32■■□□□ 1
EPHB4-205ENST00000478459 TNFRSF10AO00220 468 aa21.31■■□□□ 1
EPHB4-205ENST00000478459 SLITRK3O94933 977 aa21.31■■□□□ 1
EPHB4-205ENST00000478459 CD2BP2O95400 341 aaKnown RBP21.31■■□□□ 1
EPHB4-205ENST00000478459 CAMK1Q14012 370 aa21.31■■□□□ 1
EPHB4-205ENST00000478459 ECHDC2Q86YB7 292 aa21.31■■□□□ 1
EPHB4-205ENST00000478459 HELQQ8TDG4 1101 aa21.31■■□□□ 1
EPHB4-205ENST00000478459 PIGOQ8TEQ8 1089 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms