RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 SMAD2Q15796 467 aaKnown RBP16.25■□□□□ 0.19
SMARCE1-209ENST00000478349 LRRC71Q8N4P6 559 aa16.25■□□□□ 0.19
SMARCE1-209ENST00000478349 LINC01465Q8N7H1 131 aa16.25■□□□□ 0.19
SMARCE1-209ENST00000478349 FAM122AQ96E09 287 aa16.25■□□□□ 0.19
SMARCE1-209ENST00000478349 LRFN3Q9BTN0 628 aa16.25■□□□□ 0.19
SMARCE1-209ENST00000478349 MRPL9Q9BYD2 267 aaKnown RBP16.25■□□□□ 0.19
SMARCE1-209ENST00000478349 GCOM2Q9BZD3 368 aaPredicted RBP16.25■□□□□ 0.19
SMARCE1-209ENST00000478349 SLKQ9H2G2 1235 aaPredicted RBP16.25■□□□□ 0.19
SMARCE1-209ENST00000478349 BRMS1Q9HCU9 246 aa16.25■□□□□ 0.19
SMARCE1-209ENST00000478349 DDX25Q9UHL0 483 aaKnown RBP16.25■□□□□ 0.19
SMARCE1-209ENST00000478349 LZTS1Q9Y250 596 aa16.25■□□□□ 0.19
SMARCE1-209ENST00000478349 RBAK-RBAKDNI3L0D1 243 aa16.24■□□□□ 0.19
SMARCE1-209ENST00000478349 DCXO43602 365 aa16.24■□□□□ 0.19
SMARCE1-209ENST00000478349 ZNF862O60290 1169 aa16.24■□□□□ 0.19
SMARCE1-209ENST00000478349 FGF18O76093 207 aa16.24■□□□□ 0.19
SMARCE1-209ENST00000478349 SKIP12755 728 aa16.24■□□□□ 0.19
SMARCE1-209ENST00000478349 DARSP14868 501 aaKnown RBP16.24■□□□□ 0.19
SMARCE1-209ENST00000478349 GPC3P51654 580 aa16.24■□□□□ 0.19
SMARCE1-209ENST00000478349 ANAPC15P60006 121 aa16.24■□□□□ 0.19
SMARCE1-209ENST00000478349 FAM189BP81408 668 aa16.24■□□□□ 0.19
SMARCE1-209ENST00000478349 KRT17Q04695 432 aa16.24■□□□□ 0.19
SMARCE1-209ENST00000478349 ZP2Q05996 745 aa16.24■□□□□ 0.19
SMARCE1-209ENST00000478349 BMS1Q14692 1282 aaKnown RBP16.24■□□□□ 0.19
SMARCE1-209ENST00000478349 COLGALT1Q8NBJ5 622 aa16.24■□□□□ 0.19
SMARCE1-209ENST00000478349 FAM20AQ96MK3 541 aa16.24■□□□□ 0.19
SMARCE1-209ENST00000478349 ADAMTS10Q9H324 1103 aa16.24■□□□□ 0.19
SMARCE1-209ENST00000478349 PPME1Q9Y570 386 aa16.24■□□□□ 0.19
SMARCE1-209ENST00000478349 NLRC5Q86WI3 1866 aa16.24■□□□□ 0.19
SMARCE1-209ENST00000478349 TCF20Q9UGU0 1960 aaKnown RBP16.24■□□□□ 0.19
SMARCE1-209ENST00000478349 BRWD1Q9NSI6 2320 aa16.23■□□□□ 0.19
SMARCE1-209ENST00000478349 PRR33A8MZF0 331 aa16.23■□□□□ 0.19
SMARCE1-209ENST00000478349 ADAMTS3O15072 1205 aa16.23■□□□□ 0.19
SMARCE1-209ENST00000478349 MARCH6O60337 910 aa16.23■□□□□ 0.19
SMARCE1-209ENST00000478349 TDP2O95551 362 aa16.23■□□□□ 0.19
SMARCE1-209ENST00000478349 NRIP1P48552 1158 aa16.23■□□□□ 0.19
SMARCE1-209ENST00000478349 GATMP50440 423 aa16.23■□□□□ 0.19
SMARCE1-209ENST00000478349 PSMC5P62195 406 aa16.23■□□□□ 0.19
SMARCE1-209ENST00000478349 ADAM15Q13444 863 aa16.23■□□□□ 0.19
SMARCE1-209ENST00000478349 DSC3Q14574 896 aa16.23■□□□□ 0.19
SMARCE1-209ENST00000478349 LETM2Q2VYF4 491 aa16.23■□□□□ 0.19
SMARCE1-209ENST00000478349 MTERF2Q49AM1 385 aa16.23■□□□□ 0.19
SMARCE1-209ENST00000478349 NEK8Q86SG6 692 aa16.23■□□□□ 0.19
SMARCE1-209ENST00000478349 ZNF410Q86VK4 478 aa16.23■□□□□ 0.19
SMARCE1-209ENST00000478349 SLC7A3Q8WY07 619 aa16.23■□□□□ 0.19
SMARCE1-209ENST00000478349 ZNF558Q96NG5 402 aa16.23■□□□□ 0.19
SMARCE1-209ENST00000478349 NIFKQ9BYG3 293 aaKnown RBP16.23■□□□□ 0.19
SMARCE1-209ENST00000478349 TLE6Q9H808 572 aa16.23■□□□□ 0.19
SMARCE1-209ENST00000478349 CHST12Q9NRB3 414 aa16.23■□□□□ 0.19
SMARCE1-209ENST00000478349 TYW1Q9NV66 732 aaKnown RBP16.23■□□□□ 0.19
SMARCE1-209ENST00000478349 MBTPS2O43462 519 aa16.22■□□□□ 0.19
SMARCE1-209ENST00000478349 TBX10O75333 385 aa16.22■□□□□ 0.19
SMARCE1-209ENST00000478349 EOMESO95936 686 aa16.22■□□□□ 0.19
SMARCE1-209ENST00000478349 FGFR1P11362 822 aa16.22■□□□□ 0.19
SMARCE1-209ENST00000478349 LTBRP36941 435 aa16.22■□□□□ 0.19
SMARCE1-209ENST00000478349 PLA2G5P39877 138 aa16.22■□□□□ 0.19
SMARCE1-209ENST00000478349 CAMK1Q14012 370 aa16.22■□□□□ 0.19
SMARCE1-209ENST00000478349 CLUL1Q15846 466 aa16.22■□□□□ 0.19
SMARCE1-209ENST00000478349 UGCGQ16739 394 aa16.22■□□□□ 0.19
SMARCE1-209ENST00000478349 INF2Q27J81 1249 aa16.22■□□□□ 0.19
SMARCE1-209ENST00000478349 FAM102BQ5T8I3 360 aa16.22■□□□□ 0.19
SMARCE1-209ENST00000478349 PPP4R3AQ6IN85 833 aa16.22■□□□□ 0.19
SMARCE1-209ENST00000478349 ECHDC2Q86YB7 292 aa16.22■□□□□ 0.19
SMARCE1-209ENST00000478349 RNF169Q8NCN4 708 aa16.22■□□□□ 0.19
SMARCE1-209ENST00000478349 ETNPPLQ8TBG4 499 aa16.22■□□□□ 0.19
SMARCE1-209ENST00000478349 MBOAT7Q96N66 472 aa16.22■□□□□ 0.19
SMARCE1-209ENST00000478349 NGRNQ9NPE2 291 aaKnown RBP16.22■□□□□ 0.19
SMARCE1-209ENST00000478349 CD320Q9NPF0 282 aa16.22■□□□□ 0.19
SMARCE1-209ENST00000478349 REV3LO60673 3130 aa16.22■□□□□ 0.19
SMARCE1-209ENST00000478349 A0A0U1RQF3 1178 aa16.21■□□□□ 0.19
SMARCE1-209ENST00000478349 M0R2N6 131 aa16.21■□□□□ 0.19
SMARCE1-209ENST00000478349 TBX3O15119 743 aa16.21■□□□□ 0.19
SMARCE1-209ENST00000478349 RAB27AP51159 221 aa16.21■□□□□ 0.19
SMARCE1-209ENST00000478349 PLCB3Q01970 1234 aa16.21■□□□□ 0.19
SMARCE1-209ENST00000478349 COASYQ13057 564 aa16.21■□□□□ 0.19
SMARCE1-209ENST00000478349 TARBP2Q15633 366 aaKnown RBP16.21■□□□□ 0.19
SMARCE1-209ENST00000478349 SMRP1Q8NCR6 262 aa16.21■□□□□ 0.19
SMARCE1-209ENST00000478349 MRPS27Q92552 414 aaKnown RBP16.21■□□□□ 0.19
SMARCE1-209ENST00000478349 PHF20Q9BVI0 1012 aa16.21■□□□□ 0.19
SMARCE1-209ENST00000478349 ENTPD7Q9NQZ7 604 aa16.21■□□□□ 0.19
SMARCE1-209ENST00000478349 C19orf67A6NJJ6 358 aa16.2■□□□□ 0.18
SMARCE1-209ENST00000478349 DDX11L8A8MPP1 907 aa16.2■□□□□ 0.18
SMARCE1-209ENST00000478349 GAS2O43903 313 aaKnown RBP16.2■□□□□ 0.18
SMARCE1-209ENST00000478349 PFKFB2O60825 505 aa16.2■□□□□ 0.18
SMARCE1-209ENST00000478349 BAG4O95429 457 aaKnown RBP16.2■□□□□ 0.18
SMARCE1-209ENST00000478349 EYA4O95677 639 aa16.2■□□□□ 0.18
SMARCE1-209ENST00000478349 DNAJB1P25685 340 aa16.2■□□□□ 0.18
SMARCE1-209ENST00000478349 IRS1P35568 1242 aa16.2■□□□□ 0.18
SMARCE1-209ENST00000478349 QARSP47897 775 aaKnown RBP16.2■□□□□ 0.18
SMARCE1-209ENST00000478349 PPP2R5CQ13362 524 aa16.2■□□□□ 0.18
SMARCE1-209ENST00000478349 B3GNT9Q6UX72 402 aa16.2■□□□□ 0.18
SMARCE1-209ENST00000478349 RBM23Q86U06 439 aaKnown RBP16.2■□□□□ 0.18
SMARCE1-209ENST00000478349 SLFN12Q8IYM2 578 aa16.2■□□□□ 0.18
SMARCE1-209ENST00000478349 SPG21Q9NZD8 308 aa16.2■□□□□ 0.18
SMARCE1-209ENST00000478349 SUCLA2Q9P2R7 463 aaPredicted RBP16.2■□□□□ 0.18
SMARCE1-209ENST00000478349 FAM86C2PA6NEL3 165 aa16.19■□□□□ 0.18
SMARCE1-209ENST00000478349 LINC01565O15544 149 aa16.19■□□□□ 0.18
SMARCE1-209ENST00000478349 CCNT1O60563 726 aaKnown RBP16.19■□□□□ 0.18
SMARCE1-209ENST00000478349 MAFO75444 373 aaPredicted RBP16.19■□□□□ 0.18
SMARCE1-209ENST00000478349 P4HBP07237 508 aaKnown RBP16.19■□□□□ 0.18
SMARCE1-209ENST00000478349 GTF2F1P35269 517 aaKnown RBP eCLIP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms