RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 BTG3Q14201 252 aaPredicted RBP24.37■■□□□ 1.49
COL9A3-211ENST00000477612 NCAPH2Q6IBW4 605 aa24.37■■□□□ 1.49
COL9A3-211ENST00000477612 EXOC8Q8IYI6 725 aa24.37■■□□□ 1.49
COL9A3-211ENST00000477612 FAM184AQ8NB25 1140 aa24.37■■□□□ 1.49
COL9A3-211ENST00000477612 HSD17B14Q9BPX1 270 aa24.37■■□□□ 1.49
COL9A3-211ENST00000477612 DHX33Q9H6R0 707 aaKnown RBP24.37■■□□□ 1.49
COL9A3-211ENST00000477612 ELAC1Q9H777 363 aaKnown RBP24.37■■□□□ 1.49
COL9A3-211ENST00000477612 ZSWIM4Q9H7M6 989 aa24.37■■□□□ 1.49
COL9A3-211ENST00000477612 TTC12Q9H892 705 aaPredicted RBP24.37■■□□□ 1.49
COL9A3-211ENST00000477612 RGL1Q9NZL6 768 aa24.37■■□□□ 1.49
COL9A3-211ENST00000477612 XIRP2A4UGR9 3374 aa24.37■■□□□ 1.49
COL9A3-211ENST00000477612 DENND3A2RUS2 1198 aa24.36■■□□□ 1.49
COL9A3-211ENST00000477612 LYPLA2O95372 231 aa24.36■■□□□ 1.49
COL9A3-211ENST00000477612 BMPR1AP36894 532 aa24.36■■□□□ 1.49
COL9A3-211ENST00000477612 PLA2G4FQ68DD2 849 aa24.36■■□□□ 1.49
COL9A3-211ENST00000477612 NEK9Q8TD19 979 aa24.36■■□□□ 1.49
COL9A3-211ENST00000477612 DYDC2Q96IM9 177 aa24.36■■□□□ 1.49
COL9A3-211ENST00000477612 YWHABP31946 246 aaKnown RBP24.35■■□□□ 1.49
COL9A3-211ENST00000477612 NPEPPSP55786 919 aa24.35■■□□□ 1.49
COL9A3-211ENST00000477612 GPM6BQ13491 265 aa24.35■■□□□ 1.49
COL9A3-211ENST00000477612 TJAP1Q5JTD0 557 aa24.35■■□□□ 1.49
COL9A3-211ENST00000477612 OTUD6AQ7L8S5 288 aa24.35■■□□□ 1.49
COL9A3-211ENST00000477612 ZNF410Q86VK4 478 aa24.35■■□□□ 1.49
COL9A3-211ENST00000477612 MRPL38Q96DV4 380 aaKnown RBP24.35■■□□□ 1.49
COL9A3-211ENST00000477612 CEP170P1Q96L14 293 aa24.35■■□□□ 1.49
COL9A3-211ENST00000477612 TBC1D32Q96NH3 1257 aa24.35■■□□□ 1.49
COL9A3-211ENST00000477612 EIF2AK1Q9BQI3 630 aaKnown RBP24.35■■□□□ 1.49
COL9A3-211ENST00000477612 PLVAPQ9BX97 442 aa24.35■■□□□ 1.49
COL9A3-211ENST00000477612 TMEM60Q9H2L4 133 aa24.35■■□□□ 1.49
COL9A3-211ENST00000477612 LRFN2Q9ULH4 789 aa24.35■■□□□ 1.49
COL9A3-211ENST00000477612 PCDHB7Q9Y5E2 793 aa24.35■■□□□ 1.49
COL9A3-211ENST00000477612 RFC5P40937 340 aa24.34■■□□□ 1.49
COL9A3-211ENST00000477612 TXKP42681 527 aa24.34■■□□□ 1.49
COL9A3-211ENST00000477612 MRPS5P82675 430 aaKnown RBP24.34■■□□□ 1.49
COL9A3-211ENST00000477612 CTTNQ14247 550 aaKnown RBP24.34■■□□□ 1.49
COL9A3-211ENST00000477612 ZNF579Q8NAF0 562 aaKnown RBP24.34■■□□□ 1.49
COL9A3-211ENST00000477612 SYMPKQ92797 1274 aaKnown RBP24.34■■□□□ 1.49
COL9A3-211ENST00000477612 ASB2Q96Q27 587 aa24.34■■□□□ 1.49
COL9A3-211ENST00000477612 GCOM2Q9BZD3 368 aaPredicted RBP24.34■■□□□ 1.49
COL9A3-211ENST00000477612 TMEM161AQ9NX61 479 aa24.34■■□□□ 1.49
COL9A3-211ENST00000477612 SUCLA2Q9P2R7 463 aaPredicted RBP24.34■■□□□ 1.49
COL9A3-211ENST00000477612 COG5Q9UP83 839 aa24.34■■□□□ 1.49
COL9A3-211ENST00000477612 CUL9Q8IWT3 2517 aa24.34■■□□□ 1.49
COL9A3-211ENST00000477612 BRWD1Q9NSI6 2320 aa24.34■■□□□ 1.49
COL9A3-211ENST00000477612 U2AF2P26368 475 aaKnown RBP eCLIP24.33■■□□□ 1.494e-6■■■■□ 23.7
COL9A3-211ENST00000477612 TRAPPC10P48553 1259 aa24.33■■□□□ 1.49
COL9A3-211ENST00000477612 PTPROQ16827 1216 aa24.33■■□□□ 1.49
COL9A3-211ENST00000477612 NOSTRINQ8IVI9 506 aa24.33■■□□□ 1.49
COL9A3-211ENST00000477612 NLRP7Q8WX94 980 aa24.33■■□□□ 1.49
COL9A3-211ENST00000477612 SLC7A3Q8WY07 619 aa24.33■■□□□ 1.49
COL9A3-211ENST00000477612 P2RX5Q93086 422 aa24.33■■□□□ 1.49
COL9A3-211ENST00000477612 LMAN2LQ9H0V9 348 aa24.33■■□□□ 1.49
COL9A3-211ENST00000477612 A0A087WZ62 844 aa24.32■■□□□ 1.48
COL9A3-211ENST00000477612 GAS2O43903 313 aaKnown RBP24.32■■□□□ 1.48
COL9A3-211ENST00000477612 ZSCAN20P17040 1043 aaPredicted RBP24.32■■□□□ 1.48
COL9A3-211ENST00000477612 MCM7P33993 719 aa24.32■■□□□ 1.48
COL9A3-211ENST00000477612 CTNNB1P35222 781 aa24.32■■□□□ 1.48
COL9A3-211ENST00000477612 MCM2P49736 904 aa24.32■■□□□ 1.48
COL9A3-211ENST00000477612 CYP4A11Q02928 519 aa24.32■■□□□ 1.48
COL9A3-211ENST00000477612 NAALADL2Q58DX5 795 aa24.32■■□□□ 1.48
COL9A3-211ENST00000477612 TPH2Q8IWU9 490 aa24.32■■□□□ 1.48
COL9A3-211ENST00000477612 TMX3Q96JJ7 454 aa24.32■■□□□ 1.48
COL9A3-211ENST00000477612 ZNF668Q96K58 619 aaPredicted RBP24.32■■□□□ 1.48
COL9A3-211ENST00000477612 FDXACB1Q9BRP7 624 aaPredicted RBP24.32■■□□□ 1.48
COL9A3-211ENST00000477612 C11orf84Q9BUA3 381 aaPredicted RBP24.32■■□□□ 1.48
COL9A3-211ENST00000477612 INO80BQ9C086 356 aaPredicted RBP24.32■■□□□ 1.48
COL9A3-211ENST00000477612 MRPL42Q9Y6G3 142 aaKnown RBP24.32■■□□□ 1.48
COL9A3-211ENST00000477612 MYO7AQ13402 2215 aa24.32■■□□□ 1.48
COL9A3-211ENST00000477612 ZBTB39O15060 712 aa24.31■■□□□ 1.48
COL9A3-211ENST00000477612 CD2BP2O95400 341 aaKnown RBP24.31■■□□□ 1.48
COL9A3-211ENST00000477612 XRCC6P12956 609 aaKnown RBP eCLIP24.31■■□□□ 1.48
COL9A3-211ENST00000477612 RHPN2Q8IUC4 686 aa24.31■■□□□ 1.48
COL9A3-211ENST00000477612 CHST12Q9NRB3 414 aa24.31■■□□□ 1.48
COL9A3-211ENST00000477612 ANKEF1Q9NU02 776 aa24.31■■□□□ 1.48
COL9A3-211ENST00000477612 PLXNA4Q9HCM2 1894 aa24.3■■□□□ 1.48
COL9A3-211ENST00000477612 ATP2B1P20020 1258 aa24.3■■□□□ 1.48
COL9A3-211ENST00000477612 GATMP50440 423 aa24.3■■□□□ 1.48
COL9A3-211ENST00000477612 POLGP54098 1239 aaPredicted RBP24.3■■□□□ 1.48
COL9A3-211ENST00000477612 SKIV2LQ15477 1246 aaKnown RBP24.3■■□□□ 1.48
COL9A3-211ENST00000477612 AAK1Q2M2I8 961 aa24.3■■□□□ 1.48
COL9A3-211ENST00000477612 XKR9Q5GH70 373 aa24.3■■□□□ 1.48
COL9A3-211ENST00000477612 FAM102BQ5T8I3 360 aa24.3■■□□□ 1.48
COL9A3-211ENST00000477612 SCLT1Q96NL6 688 aa24.3■■□□□ 1.48
COL9A3-211ENST00000477612 TRAIPQ9BWF2 469 aa24.3■■□□□ 1.48
COL9A3-211ENST00000477612 ATP6V0A4Q9HBG4 840 aa24.3■■□□□ 1.48
COL9A3-211ENST00000477612 IFT122Q9HBG6 1241 aa24.3■■□□□ 1.48
COL9A3-211ENST00000477612 KIF3AQ9Y496 699 aa24.3■■□□□ 1.48
COL9A3-211ENST00000477612 COL4A3BPQ9Y5P4 624 aa24.3■■□□□ 1.48
COL9A3-211ENST00000477612 TCF20Q9UGU0 1960 aaKnown RBP24.3■■□□□ 1.48
COL9A3-211ENST00000477612 A0A0U1RQF3 1178 aa24.29■■□□□ 1.48
COL9A3-211ENST00000477612 ASAP2O43150 1006 aa24.29■■□□□ 1.48
COL9A3-211ENST00000477612 TTC38Q5R3I4 469 aa24.29■■□□□ 1.48
COL9A3-211ENST00000477612 KSR1Q8IVT5 923 aa24.29■■□□□ 1.48
COL9A3-211ENST00000477612 TCP11Q8WWU5 503 aa24.29■■□□□ 1.48
COL9A3-211ENST00000477612 HLA-CQ95604 372 aa24.29■■□□□ 1.48
COL9A3-211ENST00000477612 DACT1Q9NYF0 836 aa24.29■■□□□ 1.48
COL9A3-211ENST00000477612 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP24.28■■□□□ 1.48
COL9A3-211ENST00000477612 POTEMA6NI47 508 aa24.28■■□□□ 1.48
COL9A3-211ENST00000477612 EOMESO95936 686 aa24.28■■□□□ 1.48
COL9A3-211ENST00000477612 OR52Z1P0C646 297 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms