RNA–Protein interactions for RNA: ENST00000477392.1

LINC00996-201, long intergenic non-protein coding RNA 996, humanhuman

TSL 1 (best) BASIC

Gene LINC00996, Length 2,043 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00996-201ENST00000477392 MAPTP10636 758 aaKnown RBP17.13■□□□□ 0.33
LINC00996-201ENST00000477392 TCP1P17987 556 aaKnown RBP17.13■□□□□ 0.33
LINC00996-201ENST00000477392 ZNF280CQ8ND82 737 aa17.13■□□□□ 0.33
LINC00996-201ENST00000477392 SGIP1Q9BQI5 828 aa17.13■□□□□ 0.33
LINC00996-201ENST00000477392 SUGCTQ9HAC7 445 aa17.13■□□□□ 0.33
LINC00996-201ENST00000477392 FRMD4BQ9Y2L6 1034 aa17.13■□□□□ 0.33
LINC00996-201ENST00000477392 BZW2Q9Y6E2 419 aaKnown RBP17.13■□□□□ 0.33
LINC00996-201ENST00000477392 SSC5DA1L4H1 1573 aa17.13■□□□□ 0.33
LINC00996-201ENST00000477392 TARSL2A2RTX5 802 aaKnown RBP17.13■□□□□ 0.33
LINC00996-201ENST00000477392 TRIM49P0CI25 452 aa17.13■□□□□ 0.33
LINC00996-201ENST00000477392 TRIM49CP0CI26 452 aa17.13■□□□□ 0.33
LINC00996-201ENST00000477392 YWHABP31946 246 aaKnown RBP17.13■□□□□ 0.33
LINC00996-201ENST00000477392 ITIH3Q06033 890 aa17.13■□□□□ 0.33
LINC00996-201ENST00000477392 BAATQ14032 418 aaPredicted RBP17.13■□□□□ 0.33
LINC00996-201ENST00000477392 PLS1Q14651 629 aa17.13■□□□□ 0.33
LINC00996-201ENST00000477392 PPP2R5AQ15172 486 aa17.13■□□□□ 0.33
LINC00996-201ENST00000477392 KIAA0753Q2KHM9 967 aa17.13■□□□□ 0.33
LINC00996-201ENST00000477392 CBWD6Q4V339 395 aa17.13■□□□□ 0.33
LINC00996-201ENST00000477392 CBWD3Q5JTY5 395 aa17.13■□□□□ 0.33
LINC00996-201ENST00000477392 CBWD5Q5RIA9 395 aa17.13■□□□□ 0.33
LINC00996-201ENST00000477392 ANGEL2Q5VTE6 544 aaKnown RBP17.13■□□□□ 0.33
LINC00996-201ENST00000477392 C4orf19Q8IY42 314 aa17.13■□□□□ 0.33
LINC00996-201ENST00000477392 OLIG1Q8TAK6 271 aa17.13■□□□□ 0.33
LINC00996-201ENST00000477392 TRPM4Q8TD43 1214 aa17.13■□□□□ 0.33
LINC00996-201ENST00000477392 C12orf42Q96LP6 360 aa17.13■□□□□ 0.33
LINC00996-201ENST00000477392 AS3MTQ9HBK9 375 aa17.13■□□□□ 0.33
LINC00996-201ENST00000477392 PCDHGC5Q9Y5F6 944 aa17.13■□□□□ 0.33
LINC00996-201ENST00000477392 BTNL10A8MVZ5 291 aa17.12■□□□□ 0.33
LINC00996-201ENST00000477392 BACH1O14867 736 aa17.12■□□□□ 0.33
LINC00996-201ENST00000477392 PALMO75781 387 aa17.12■□□□□ 0.33
LINC00996-201ENST00000477392 PLS3P13797 630 aa17.12■□□□□ 0.33
LINC00996-201ENST00000477392 JAK3P52333 1124 aa17.12■□□□□ 0.33
LINC00996-201ENST00000477392 HMGCS2P54868 508 aa17.12■□□□□ 0.33
LINC00996-201ENST00000477392 MYBPC2Q14324 1141 aa17.12■□□□□ 0.33
LINC00996-201ENST00000477392 ARHGEF16Q5VV41 709 aa17.12■□□□□ 0.33
LINC00996-201ENST00000477392 SYCP3Q8IZU3 236 aa17.12■□□□□ 0.33
LINC00996-201ENST00000477392 PSMB7Q99436 277 aa17.12■□□□□ 0.33
LINC00996-201ENST00000477392 SH2D3AQ9BRG2 576 aa17.12■□□□□ 0.33
LINC00996-201ENST00000477392 LARSQ9P2J5 1176 aaKnown RBP17.12■□□□□ 0.33
LINC00996-201ENST00000477392 CD2APQ9Y5K6 639 aa17.12■□□□□ 0.33
LINC00996-201ENST00000477392 TISP43B9A030 160 aa17.11■□□□□ 0.33
LINC00996-201ENST00000477392 CXCR5P32302 372 aa17.11■□□□□ 0.33
LINC00996-201ENST00000477392 BFSP1Q12934 665 aa17.11■□□□□ 0.33
LINC00996-201ENST00000477392 ALCAMQ13740 583 aa17.11■□□□□ 0.33
LINC00996-201ENST00000477392 TERF2Q15554 542 aa17.11■□□□□ 0.33
LINC00996-201ENST00000477392 APOBEC3FQ8IUX4 373 aaKnown RBP17.11■□□□□ 0.33
LINC00996-201ENST00000477392 MMGT1Q8N4V1 131 aa17.11■□□□□ 0.33
LINC00996-201ENST00000477392 PICK1Q9NRD5 415 aa17.11■□□□□ 0.33
LINC00996-201ENST00000477392 SMARCAL1Q9NZC9 954 aa17.11■□□□□ 0.33
LINC00996-201ENST00000477392 EHD2Q9NZN4 543 aa17.11■□□□□ 0.33
LINC00996-201ENST00000477392 NAGPAQ9UK23 515 aa17.11■□□□□ 0.33
LINC00996-201ENST00000477392 ZNF214Q9UL59 606 aaPredicted RBP17.11■□□□□ 0.33
LINC00996-201ENST00000477392 ADAMTS5Q9UNA0 930 aa17.11■□□□□ 0.33
LINC00996-201ENST00000477392 TESPA1A2RU30 521 aaPredicted RBP17.11■□□□□ 0.33
LINC00996-201ENST00000477392 WDR64B1ANS9 1081 aa17.11■□□□□ 0.33
LINC00996-201ENST00000477392 EXOC3O60645 756 aa17.11■□□□□ 0.33
LINC00996-201ENST00000477392 ANXA13P27216 316 aa17.11■□□□□ 0.33
LINC00996-201ENST00000477392 DSG3P32926 999 aa17.11■□□□□ 0.33
LINC00996-201ENST00000477392 NAP1L1P55209 391 aaKnown RBP17.11■□□□□ 0.33
LINC00996-201ENST00000477392 PSMC5P62195 406 aa17.11■□□□□ 0.33
LINC00996-201ENST00000477392 KRT76Q01546 638 aa17.11■□□□□ 0.33
LINC00996-201ENST00000477392 SMC1AQ14683 1233 aaKnown RBP17.11■□□□□ 0.33
LINC00996-201ENST00000477392 C10orf76Q5T2E6 689 aa17.11■□□□□ 0.33
LINC00996-201ENST00000477392 SNRNP48Q6IEG0 339 aaKnown RBP17.11■□□□□ 0.33
LINC00996-201ENST00000477392 HDXQ7Z353 690 aa17.11■□□□□ 0.33
LINC00996-201ENST00000477392 ATP8B3O60423 1300 aa17.1■□□□□ 0.33
LINC00996-201ENST00000477392 GRID2IPA4D2P6 1211 aa17.1■□□□□ 0.33
LINC00996-201ENST00000477392 F8VZ95 297 aa17.1■□□□□ 0.33
LINC00996-201ENST00000477392 OAS2P29728 719 aaKnown RBP17.1■□□□□ 0.33
LINC00996-201ENST00000477392 CCND2P30279 289 aa17.1■□□□□ 0.33
LINC00996-201ENST00000477392 SFNP31947 248 aa17.1■□□□□ 0.33
LINC00996-201ENST00000477392 MYL7Q01449 175 aa17.1■□□□□ 0.33
LINC00996-201ENST00000477392 UTP14CQ5TAP6 766 aaKnown RBP17.1■□□□□ 0.33
LINC00996-201ENST00000477392 PLA2G4FQ68DD2 849 aa17.1■□□□□ 0.33
LINC00996-201ENST00000477392 XRRA1Q6P2D8 792 aa17.1■□□□□ 0.33
LINC00996-201ENST00000477392 VSIG10LQ86VR7 867 aa17.1■□□□□ 0.33
LINC00996-201ENST00000477392 C12orf56Q8IXR9 622 aa17.1■□□□□ 0.33
LINC00996-201ENST00000477392 TMEM174Q8WUU8 243 aa17.1■□□□□ 0.33
LINC00996-201ENST00000477392 ACCSQ96QU6 501 aa17.1■□□□□ 0.33
LINC00996-201ENST00000477392 GPR88Q9GZN0 384 aa17.1■□□□□ 0.33
LINC00996-201ENST00000477392 INTS2Q9H0H0 1204 aaKnown RBP17.1■□□□□ 0.33
LINC00996-201ENST00000477392 ST6GALNAC4Q9H4F1 302 aa17.1■□□□□ 0.33
LINC00996-201ENST00000477392 TMEM206Q9H813 350 aa17.1■□□□□ 0.33
LINC00996-201ENST00000477392 GPRC5CQ9NQ84 441 aa17.1■□□□□ 0.33
LINC00996-201ENST00000477392 TSKSQ9UJT2 592 aa17.1■□□□□ 0.33
LINC00996-201ENST00000477392 FTCDO95954 541 aa17.09■□□□□ 0.33
LINC00996-201ENST00000477392 FERP16591 822 aa17.09■□□□□ 0.33
LINC00996-201ENST00000477392 OAZ1P54368 228 aa17.09■□□□□ 0.33
LINC00996-201ENST00000477392 ALKBH5Q6P6C2 394 aaKnown RBP17.09■□□□□ 0.33
LINC00996-201ENST00000477392 DNAAF5Q86Y56 855 aa17.09■□□□□ 0.33
LINC00996-201ENST00000477392 MSL3Q8N5Y2 521 aaKnown RBP17.09■□□□□ 0.33
LINC00996-201ENST00000477392 SPATA4Q8NEY3 305 aa17.09■□□□□ 0.33
LINC00996-201ENST00000477392 GPRASP2Q96D09 838 aa17.09■□□□□ 0.33
LINC00996-201ENST00000477392 TIPINQ9BVW5 301 aa17.09■□□□□ 0.33
LINC00996-201ENST00000477392 DICER1Q9UPY3 1922 aaKnown RBP17.09■□□□□ 0.33
LINC00996-201ENST00000477392 H3BQF6 201 aa17.09■□□□□ 0.33
LINC00996-201ENST00000477392 DDX3XO00571 662 aaKnown RBP eCLIP17.09■□□□□ 0.33
LINC00996-201ENST00000477392 GFPT2O94808 682 aa17.09■□□□□ 0.33
LINC00996-201ENST00000477392 NR3C2P08235 984 aa17.09■□□□□ 0.33
LINC00996-201ENST00000477392 SOX5P35711 763 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms