RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 PCIF1Q9H4Z3 704 aa18.18■□□□□ 0.5
TVP23B-202ENST00000476139 KCND2Q9NZV8 630 aa18.18■□□□□ 0.5
TVP23B-202ENST00000476139 SEL1LQ9UBV2 794 aa18.18■□□□□ 0.5
TVP23B-202ENST00000476139 RBBP6Q7Z6E9 1792 aaKnown RBP18.17■□□□□ 0.5
TVP23B-202ENST00000476139 RARRES1P49788 294 aa18.17■□□□□ 0.5
TVP23B-202ENST00000476139 RPGRIP1Q96KN7 1286 aa18.17■□□□□ 0.5
TVP23B-202ENST00000476139 LRRC1Q9BTT6 524 aa18.17■□□□□ 0.5
TVP23B-202ENST00000476139 GOLPH3Q9H4A6 298 aa18.17■□□□□ 0.5
TVP23B-202ENST00000476139 DMAC2Q9NW81 257 aa18.17■□□□□ 0.5
TVP23B-202ENST00000476139 VWA5AO00534 786 aa18.17■□□□□ 0.5
TVP23B-202ENST00000476139 STRA6Q9BX79 667 aa18.17■□□□□ 0.5
TVP23B-202ENST00000476139 GPRC5CQ9NQ84 441 aa18.17■□□□□ 0.5
TVP23B-202ENST00000476139 FRMD4BQ9Y2L6 1034 aa18.17■□□□□ 0.5
TVP23B-202ENST00000476139 HYOU1Q9Y4L1 999 aa18.17■□□□□ 0.5
TVP23B-202ENST00000476139 TESPA1A2RU30 521 aaPredicted RBP18.16■□□□□ 0.5
TVP23B-202ENST00000476139 K7ENM7 598 aa18.16■□□□□ 0.5
TVP23B-202ENST00000476139 FMO5P49326 533 aa18.16■□□□□ 0.5
TVP23B-202ENST00000476139 JAM2P57087 298 aa18.16■□□□□ 0.5
TVP23B-202ENST00000476139 PTPROQ16827 1216 aa18.16■□□□□ 0.5
TVP23B-202ENST00000476139 ZSWIM2Q8NEG5 633 aa18.16■□□□□ 0.5
TVP23B-202ENST00000476139 NAGPAQ9UK23 515 aa18.16■□□□□ 0.5
TVP23B-202ENST00000476139 CTDP1Q9Y5B0 961 aaPredicted RBP18.16■□□□□ 0.5
TVP23B-202ENST00000476139 EXOC3O60645 756 aa18.16■□□□□ 0.5
TVP23B-202ENST00000476139 LRRN2O75325 713 aa18.16■□□□□ 0.5
TVP23B-202ENST00000476139 PPP1R37O75864 691 aa18.16■□□□□ 0.5
TVP23B-202ENST00000476139 GFPT2O94808 682 aa18.16■□□□□ 0.5
TVP23B-202ENST00000476139 TCP1P17987 556 aaKnown RBP18.16■□□□□ 0.5
TVP23B-202ENST00000476139 QARSP47897 775 aaKnown RBP18.16■□□□□ 0.5
TVP23B-202ENST00000476139 DLG4P78352 724 aa18.16■□□□□ 0.5
TVP23B-202ENST00000476139 KCTD19Q17RG1 926 aaPredicted RBP18.16■□□□□ 0.5
TVP23B-202ENST00000476139 RNF207Q6ZRF8 634 aa18.16■□□□□ 0.5
TVP23B-202ENST00000476139 TXLNBQ8N3L3 684 aa18.16■□□□□ 0.5
TVP23B-202ENST00000476139 CALCOCO1Q9P1Z2 691 aa18.16■□□□□ 0.5
TVP23B-202ENST00000476139 TULP1O00294 542 aaPredicted RBP18.15■□□□□ 0.5
TVP23B-202ENST00000476139 CAPN2P17655 700 aa18.15■□□□□ 0.5
TVP23B-202ENST00000476139 YWHABP31946 246 aaKnown RBP18.15■□□□□ 0.5
TVP23B-202ENST00000476139 RNASE9P60153 205 aaKnown RBP18.15■□□□□ 0.5
TVP23B-202ENST00000476139 ZSCAN26Q16670 478 aa18.15■□□□□ 0.5
TVP23B-202ENST00000476139 ALKBH5Q6P6C2 394 aaKnown RBP18.15■□□□□ 0.5
TVP23B-202ENST00000476139 PDCD2LQ9BRP1 358 aa18.15■□□□□ 0.5
TVP23B-202ENST00000476139 DMGDHQ9UI17 866 aaKnown RBP18.15■□□□□ 0.5
TVP23B-202ENST00000476139 FER1L6Q2WGJ9 1857 aa18.15■□□□□ 0.5
TVP23B-202ENST00000476139 PPP1R12BO60237 982 aaPredicted RBP18.15■□□□□ 0.5
TVP23B-202ENST00000476139 CCNE2O96020 404 aa18.15■□□□□ 0.5
TVP23B-202ENST00000476139 NPEPPSP55786 919 aa18.15■□□□□ 0.5
TVP23B-202ENST00000476139 BAATQ14032 418 aaPredicted RBP18.15■□□□□ 0.5
TVP23B-202ENST00000476139 BACE1P56817 501 aa18.15■□□□□ 0.5
TVP23B-202ENST00000476139 GHRHRQ02643 423 aa18.15■□□□□ 0.5
TVP23B-202ENST00000476139 NFIL3Q16649 462 aa18.15■□□□□ 0.5
TVP23B-202ENST00000476139 CCDC181Q5TID7 509 aa18.15■□□□□ 0.5
TVP23B-202ENST00000476139 ARHGEF16Q5VV41 709 aa18.15■□□□□ 0.5
TVP23B-202ENST00000476139 PLA2G4FQ68DD2 849 aa18.15■□□□□ 0.5
TVP23B-202ENST00000476139 EXOC4Q96A65 974 aa18.15■□□□□ 0.5
TVP23B-202ENST00000476139 LUC7LQ9NQ29 371 aaKnown RBP18.15■□□□□ 0.5
TVP23B-202ENST00000476139 PXMP2Q9NR77 195 aa18.15■□□□□ 0.5
TVP23B-202ENST00000476139 GRID2IPA4D2P6 1211 aa18.14■□□□□ 0.49
TVP23B-202ENST00000476139 TUBBP07437 444 aa18.14■□□□□ 0.49
TVP23B-202ENST00000476139 STXBP4Q6ZWJ1 553 aa18.14■□□□□ 0.49
TVP23B-202ENST00000476139 NIPA1Q7RTP0 329 aa18.14■□□□□ 0.49
TVP23B-202ENST00000476139 WRNIP1Q96S55 665 aa18.14■□□□□ 0.49
TVP23B-202ENST00000476139 CBWD1Q9BRT8 395 aa18.14■□□□□ 0.49
TVP23B-202ENST00000476139 LARSQ9P2J5 1176 aaKnown RBP18.14■□□□□ 0.49
TVP23B-202ENST00000476139 TELO2Q9Y4R8 837 aa18.14■□□□□ 0.49
TVP23B-202ENST00000476139 ATAD5Q96QE3 1844 aa18.14■□□□□ 0.49
TVP23B-202ENST00000476139 GTPBP10A4D1E9 387 aaKnown RBP18.14■□□□□ 0.49
TVP23B-202ENST00000476139 ZBED4O75132 1171 aa18.14■□□□□ 0.49
TVP23B-202ENST00000476139 RPS12P25398 132 aaKnown RBP18.14■□□□□ 0.49
TVP23B-202ENST00000476139 HMGCS2P54868 508 aa18.14■□□□□ 0.49
TVP23B-202ENST00000476139 NEK9Q8TD19 979 aa18.14■□□□□ 0.49
TVP23B-202ENST00000476139 MKNK1Q9BUB5 465 aa18.14■□□□□ 0.49
TVP23B-202ENST00000476139 RBM12Q9NTZ6 932 aaKnown RBP18.14■□□□□ 0.49
TVP23B-202ENST00000476139 FBXL5Q9UKA1 691 aa18.14■□□□□ 0.49
TVP23B-202ENST00000476139 PCDHGC5Q9Y5F6 944 aa18.14■□□□□ 0.49
TVP23B-202ENST00000476139 BZW2Q9Y6E2 419 aaKnown RBP18.14■□□□□ 0.49
TVP23B-202ENST00000476139 TARSL2A2RTX5 802 aaKnown RBP18.13■□□□□ 0.49
TVP23B-202ENST00000476139 BACH1O14867 736 aa18.13■□□□□ 0.49
TVP23B-202ENST00000476139 FAM204AQ9H8W3 233 aa18.13■□□□□ 0.49
TVP23B-202ENST00000476139 DNAJC12Q9UKB3 198 aa18.13■□□□□ 0.49
TVP23B-202ENST00000476139 A0A0U1RQG5 324 aaPredicted RBP18.13■□□□□ 0.49
TVP23B-202ENST00000476139 DDX3XO00571 662 aaKnown RBP eCLIP18.13■□□□□ 0.49
TVP23B-202ENST00000476139 EVI5O60447 810 aa18.13■□□□□ 0.49
TVP23B-202ENST00000476139 PRKCIP41743 596 aa18.13■□□□□ 0.49
TVP23B-202ENST00000476139 ANGEL2Q5VTE6 544 aaKnown RBP18.13■□□□□ 0.49
TVP23B-202ENST00000476139 CCNI2Q6ZMN8 369 aaPredicted RBP18.13■□□□□ 0.49
TVP23B-202ENST00000476139 TBC1D22BQ9NU19 505 aa18.13■□□□□ 0.49
TVP23B-202ENST00000476139 SYF2O95926 243 aaKnown RBP18.12■□□□□ 0.49
TVP23B-202ENST00000476139 PTPRAP18433 802 aa18.12■□□□□ 0.49
TVP23B-202ENST00000476139 NOP2P46087 812 aaKnown RBP18.12■□□□□ 0.49
TVP23B-202ENST00000476139 PEX3P56589 373 aa18.12■□□□□ 0.49
TVP23B-202ENST00000476139 BFSP1Q12934 665 aa18.12■□□□□ 0.49
TVP23B-202ENST00000476139 DRAP1Q14919 205 aaPredicted RBP18.12■□□□□ 0.49
TVP23B-202ENST00000476139 MEI1Q5TIA1 1274 aa18.12■□□□□ 0.49
TVP23B-202ENST00000476139 FOXR1Q6PIV2 292 aa18.12■□□□□ 0.49
TVP23B-202ENST00000476139 MMGT1Q8N4V1 131 aa18.12■□□□□ 0.49
TVP23B-202ENST00000476139 SELENOOQ9BVL4 669 aa18.12■□□□□ 0.49
TVP23B-202ENST00000476139 RNF146Q9NTX7 359 aa18.12■□□□□ 0.49
TVP23B-202ENST00000476139 HPCAL4Q9UM19 191 aa18.12■□□□□ 0.49
TVP23B-202ENST00000476139 PCNTO95613 3336 aa18.12■□□□□ 0.49
TVP23B-202ENST00000476139 SLC16A4O15374 487 aa18.12■□□□□ 0.49
TVP23B-202ENST00000476139 SORBS3O60504 671 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms