RNA–Protein interactions for RNA: ENST00000474766.1

SH3D21-202, Transcript of SH3 domain containing 21, humanhuman

TSL 1 (best)

Gene SH3D21, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-202ENST00000474766 TAX1BP1Q86VP1 789 aa23.1■■□□□ 1.29
SH3D21-202ENST00000474766 SLFN12Q8IYM2 578 aa23.1■■□□□ 1.29
SH3D21-202ENST00000474766 SMCR8Q8TEV9 937 aaPredicted RBP23.1■■□□□ 1.29
SH3D21-202ENST00000474766 EDEM3Q9BZQ6 932 aa23.1■■□□□ 1.29
SH3D21-202ENST00000474766 RBM12Q9NTZ6 932 aaKnown RBP23.1■■□□□ 1.29
SH3D21-202ENST00000474766 ARHGAP20Q9P2F6 1191 aa23.1■■□□□ 1.29
SH3D21-202ENST00000474766 SUFUQ9UMX1 484 aa23.1■■□□□ 1.29
SH3D21-202ENST00000474766 KIAA1024Q9UPX6 916 aa23.1■■□□□ 1.29
SH3D21-202ENST00000474766 E9PMD0 336 aa23.09■■□□□ 1.29
SH3D21-202ENST00000474766 FKBP3Q00688 224 aaKnown RBP23.09■■□□□ 1.29
SH3D21-202ENST00000474766 ICA1Q05084 483 aa23.09■■□□□ 1.29
SH3D21-202ENST00000474766 LRIG3Q6UXM1 1119 aa23.09■■□□□ 1.29
SH3D21-202ENST00000474766 PIK3R5Q8WYR1 880 aa23.09■■□□□ 1.29
SH3D21-202ENST00000474766 GMCL1Q96IK5 515 aa23.09■■□□□ 1.29
SH3D21-202ENST00000474766 PTPRFP10586 1907 aa23.09■■□□□ 1.29
SH3D21-202ENST00000474766 GOLGA6L7A0A1B0GV03 622 aa23.09■■□□□ 1.29
SH3D21-202ENST00000474766 F5H6K3 240 aa23.09■■□□□ 1.29
SH3D21-202ENST00000474766 GH2P01242 217 aa23.09■■□□□ 1.29
SH3D21-202ENST00000474766 PLA2G4BP0C869 781 aa23.09■■□□□ 1.29
SH3D21-202ENST00000474766 PTPRAP18433 802 aa23.09■■□□□ 1.29
SH3D21-202ENST00000474766 MATR3P43243 847 aaKnown RBP eCLIP23.09■■□□□ 1.29
SH3D21-202ENST00000474766 KLRC3Q07444 240 aa23.09■■□□□ 1.29
SH3D21-202ENST00000474766 ABCB5Q2M3G0 1257 aa23.09■■□□□ 1.29
SH3D21-202ENST00000474766 CCDC13Q8IYE1 715 aa23.09■■□□□ 1.29
SH3D21-202ENST00000474766 TLR10Q9BXR5 811 aa23.09■■□□□ 1.29
SH3D21-202ENST00000474766 FAM207AQ9NSI2 230 aaPredicted RBP23.09■■□□□ 1.29
SH3D21-202ENST00000474766 IRF6O14896 467 aa23.08■■□□□ 1.29
SH3D21-202ENST00000474766 GUCY1A3Q02108 690 aa23.08■■□□□ 1.29
SH3D21-202ENST00000474766 SPIRE1Q08AE8 756 aa23.08■■□□□ 1.29
SH3D21-202ENST00000474766 KCTD16Q68DU8 428 aa23.08■■□□□ 1.29
SH3D21-202ENST00000474766 CCDC65Q8IXS2 484 aa23.08■■□□□ 1.29
SH3D21-202ENST00000474766 ETNPPLQ8TBG4 499 aa23.08■■□□□ 1.29
SH3D21-202ENST00000474766 BAP1Q92560 729 aa23.08■■□□□ 1.29
SH3D21-202ENST00000474766 NOX5Q96PH1 765 aa23.08■■□□□ 1.29
SH3D21-202ENST00000474766 P2RX7Q99572 595 aaKnown RBP23.08■■□□□ 1.29
SH3D21-202ENST00000474766 HINFPQ9BQA5 517 aa23.08■■□□□ 1.29
SH3D21-202ENST00000474766 AMNQ9BXJ7 453 aa23.08■■□□□ 1.29
SH3D21-202ENST00000474766 PICK1Q9NRD5 415 aa23.08■■□□□ 1.29
SH3D21-202ENST00000474766 COL4A3BPQ9Y5P4 624 aa23.08■■□□□ 1.29
SH3D21-202ENST00000474766 POTEB3A0JP26 581 aa23.08■■□□□ 1.28
SH3D21-202ENST00000474766 FRMD3A2A2Y4 597 aa23.08■■□□□ 1.28
SH3D21-202ENST00000474766 TBX3O15119 743 aa23.08■■□□□ 1.28
SH3D21-202ENST00000474766 RAD21O60216 631 aa23.08■■□□□ 1.28
SH3D21-202ENST00000474766 PLEKP08567 350 aaPredicted RBP23.08■■□□□ 1.28
SH3D21-202ENST00000474766 ARHGAP4P98171 946 aa23.08■■□□□ 1.28
SH3D21-202ENST00000474766 ITGB3BPQ13352 177 aaPredicted RBP23.08■■□□□ 1.28
SH3D21-202ENST00000474766 POTEBQ6S5H4 581 aa23.08■■□□□ 1.28
SH3D21-202ENST00000474766 CEP63Q96MT8 703 aa23.08■■□□□ 1.28
SH3D21-202ENST00000474766 MMRN2Q9H8L6 949 aa23.08■■□□□ 1.28
SH3D21-202ENST00000474766 ZBTB21Q9ULJ3 1066 aa23.08■■□□□ 1.28
SH3D21-202ENST00000474766 AKR1B10O60218 316 aa23.07■■□□□ 1.28
SH3D21-202ENST00000474766 CYP11B2P19099 503 aa23.07■■□□□ 1.28
SH3D21-202ENST00000474766 EIF4A3P38919 411 aaKnown RBP23.07■■□□□ 1.28
SH3D21-202ENST00000474766 CDR1P51861 262 aa23.07■■□□□ 1.28
SH3D21-202ENST00000474766 PPATQ06203 517 aa23.07■■□□□ 1.28
SH3D21-202ENST00000474766 PPIL2Q13356 520 aa23.07■■□□□ 1.28
SH3D21-202ENST00000474766 Q4G0T1 1027 aa23.07■■□□□ 1.28
SH3D21-202ENST00000474766 RNF187Q5TA31 235 aaPredicted RBP23.07■■□□□ 1.28
SH3D21-202ENST00000474766 MS4A4AQ96JQ5 239 aa23.07■■□□□ 1.28
SH3D21-202ENST00000474766 MED24O75448 989 aa23.06■■□□□ 1.28
SH3D21-202ENST00000474766 GLI1P08151 1106 aa23.06■■□□□ 1.28
SH3D21-202ENST00000474766 ELF1P32519 619 aa23.06■■□□□ 1.28
SH3D21-202ENST00000474766 HSPA9P38646 679 aaKnown RBP23.06■■□□□ 1.28
SH3D21-202ENST00000474766 MAGEA1P43355 309 aa23.06■■□□□ 1.28
SH3D21-202ENST00000474766 CARSP49589 748 aaKnown RBP23.06■■□□□ 1.28
SH3D21-202ENST00000474766 MARSP56192 900 aaKnown RBP23.06■■□□□ 1.28
SH3D21-202ENST00000474766 KLHDC7AQ5VTJ3 777 aa23.06■■□□□ 1.28
SH3D21-202ENST00000474766 GPBP1Q86WP2 473 aa23.06■■□□□ 1.28
SH3D21-202ENST00000474766 FGFBP2Q9BYJ0 223 aa23.06■■□□□ 1.28
SH3D21-202ENST00000474766 KCNG1Q9UIX4 513 aa23.06■■□□□ 1.28
SH3D21-202ENST00000474766 NFU1Q9UMS0 254 aa23.06■■□□□ 1.28
SH3D21-202ENST00000474766 ZHX2Q9Y6X8 837 aa23.06■■□□□ 1.28
SH3D21-202ENST00000474766 SSU72P8A0A1W2PR75 194 aa23.06■■□□□ 1.28
SH3D21-202ENST00000474766 HEXIM1O94992 359 aaKnown RBP23.06■■□□□ 1.28
SH3D21-202ENST00000474766 NDUFB10O96000 172 aa23.06■■□□□ 1.28
SH3D21-202ENST00000474766 SSBP05455 408 aaKnown RBP eCLIP23.06■■□□□ 1.28
SH3D21-202ENST00000474766 SLC12A3P55017 1021 aa23.06■■□□□ 1.28
SH3D21-202ENST00000474766 KCNMA1Q12791 1236 aa23.06■■□□□ 1.28
SH3D21-202ENST00000474766 ZC3H3Q8IXZ2 948 aaKnown RBP23.06■■□□□ 1.28
SH3D21-202ENST00000474766 P3H4Q92791 437 aa23.06■■□□□ 1.28
SH3D21-202ENST00000474766 LENG9Q96B70 501 aa23.06■■□□□ 1.28
SH3D21-202ENST00000474766 WBP1LQ9NX94 342 aa23.06■■□□□ 1.28
SH3D21-202ENST00000474766 GNA14O95837 355 aa23.05■■□□□ 1.28
SH3D21-202ENST00000474766 FOSP01100 380 aaPredicted RBP23.05■■□□□ 1.28
SH3D21-202ENST00000474766 ASNSP08243 561 aa23.05■■□□□ 1.28
SH3D21-202ENST00000474766 ARSHQ5FYA8 562 aa23.05■■□□□ 1.28
SH3D21-202ENST00000474766 CEP85LQ5SZL2 805 aa23.05■■□□□ 1.28
SH3D21-202ENST00000474766 BTNL9Q6UXG8 535 aa23.05■■□□□ 1.28
SH3D21-202ENST00000474766 FBXO11Q86XK2 927 aa23.05■■□□□ 1.28
SH3D21-202ENST00000474766 KCTD10Q9H3F6 313 aa23.05■■□□□ 1.28
SH3D21-202ENST00000474766 TMBIM4Q9HC24 238 aa23.05■■□□□ 1.28
SH3D21-202ENST00000474766 EPB41L5Q9HCM4 733 aa23.05■■□□□ 1.28
SH3D21-202ENST00000474766 SLC40A1Q9NP59 571 aa23.05■■□□□ 1.28
SH3D21-202ENST00000474766 PLCB1Q9NQ66 1216 aa23.05■■□□□ 1.28
SH3D21-202ENST00000474766 LRRC53A6NM62 1247 aa23.04■■□□□ 1.28
SH3D21-202ENST00000474766 RBAK-RBAKDNI3L0D1 243 aa23.04■■□□□ 1.28
SH3D21-202ENST00000474766 SREBF1P36956 1147 aa23.04■■□□□ 1.28
SH3D21-202ENST00000474766 STAT3P40763 770 aa23.04■■□□□ 1.28
SH3D21-202ENST00000474766 ASTE1Q2TB18 679 aaPredicted RBP23.04■■□□□ 1.28
SH3D21-202ENST00000474766 SYDE2Q5VT97 1194 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 189.9 ms