RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 C10orf76Q5T2E6 689 aa10.74□□□□□ -0.69
USP39-214ENST00000474572 ZNF572Q7Z3I7 529 aaPredicted RBP10.74□□□□□ -0.69
USP39-214ENST00000474572 RNF10Q8N5U6 811 aaKnown RBP10.74□□□□□ -0.69
USP39-214ENST00000474572 RPGRIP1Q96KN7 1286 aa10.74□□□□□ -0.69
USP39-214ENST00000474572 ACCSQ96QU6 501 aa10.74□□□□□ -0.69
USP39-214ENST00000474572 IWS1Q96ST2 819 aa10.74□□□□□ -0.69
USP39-214ENST00000474572 ANKZF1Q9H8Y5 726 aa10.74□□□□□ -0.69
USP39-214ENST00000474572 ZNF446Q9NWS9 450 aa10.74□□□□□ -0.69
USP39-214ENST00000474572 HOXC10Q9NYD6 342 aa10.74□□□□□ -0.69
USP39-214ENST00000474572 OGFRQ9NZT2 677 aa10.74□□□□□ -0.69
USP39-214ENST00000474572 TCEAL9Q9UHQ7 104 aa10.74□□□□□ -0.69
USP39-214ENST00000474572 RAB21Q9UL25 225 aa10.74□□□□□ -0.69
USP39-214ENST00000474572 USP20Q9Y2K6 914 aa10.74□□□□□ -0.69
USP39-214ENST00000474572 JRKLQ9Y4A0 524 aa10.74□□□□□ -0.69
USP39-214ENST00000474572 PCDHA10Q9Y5I2 948 aa10.74□□□□□ -0.69
USP39-214ENST00000474572 FHOD1Q9Y613 1164 aa10.74□□□□□ -0.69
USP39-214ENST00000474572 SAR1BQ9Y6B6 198 aa10.74□□□□□ -0.69
USP39-214ENST00000474572 BZW2Q9Y6E2 419 aaKnown RBP10.74□□□□□ -0.69
USP39-214ENST00000474572 CAPN6Q9Y6Q1 641 aa10.74□□□□□ -0.69
USP39-214ENST00000474572 PFASO15067 1338 aa10.74□□□□□ -0.69
USP39-214ENST00000474572 CTAGE15A4D2H0 777 aa10.73□□□□□ -0.69
USP39-214ENST00000474572 SPATA31C2B4DYI2 1134 aa10.73□□□□□ -0.69
USP39-214ENST00000474572 IRF6O14896 467 aa10.73□□□□□ -0.69
USP39-214ENST00000474572 P4HA2O15460 535 aa10.73□□□□□ -0.69
USP39-214ENST00000474572 GFPT2O94808 682 aa10.73□□□□□ -0.69
USP39-214ENST00000474572 CTAGE8P0CG41 777 aa10.73□□□□□ -0.69
USP39-214ENST00000474572 ACTN1P12814 892 aa10.73□□□□□ -0.69
USP39-214ENST00000474572 RTP1P59025 263 aa10.73□□□□□ -0.69
USP39-214ENST00000474572 APBA1Q02410 837 aa10.73□□□□□ -0.69
USP39-214ENST00000474572 GFPT1Q06210 699 aaPredicted RBP10.73□□□□□ -0.69
USP39-214ENST00000474572 CKAP4Q07065 602 aaKnown RBP10.73□□□□□ -0.69
USP39-214ENST00000474572 BFSP1Q12934 665 aa10.73□□□□□ -0.69
USP39-214ENST00000474572 RAPGEF1Q13905 1077 aa10.73□□□□□ -0.69
USP39-214ENST00000474572 VGLL4Q14135 290 aa10.73□□□□□ -0.69
USP39-214ENST00000474572 TDRD12Q587J7 1177 aaKnown RBP10.73□□□□□ -0.69
USP39-214ENST00000474572 DCAF17Q5H9S7 520 aaPredicted RBP10.73□□□□□ -0.69
USP39-214ENST00000474572 CTAGE6Q86UF2 777 aa10.73□□□□□ -0.69
USP39-214ENST00000474572 KSR1Q8IVT5 923 aa10.73□□□□□ -0.69
USP39-214ENST00000474572 CTAGE4Q8IX94 777 aa10.73□□□□□ -0.69
USP39-214ENST00000474572 DNERQ8NFT8 737 aa10.73□□□□□ -0.69
USP39-214ENST00000474572 OLIG1Q8TAK6 271 aa10.73□□□□□ -0.69
USP39-214ENST00000474572 SPIRE2Q8WWL2 714 aa10.73□□□□□ -0.69
USP39-214ENST00000474572 NTPCRQ9BSD7 190 aaKnown RBP10.73□□□□□ -0.69
USP39-214ENST00000474572 C17orf75Q9HAS0 396 aa10.73□□□□□ -0.69
USP39-214ENST00000474572 LUC7LQ9NQ29 371 aaKnown RBP10.73□□□□□ -0.69
USP39-214ENST00000474572 PDLIM7Q9NR12 457 aa10.73□□□□□ -0.69
USP39-214ENST00000474572 GCNT4Q9P109 453 aa10.73□□□□□ -0.69
USP39-214ENST00000474572 AJAP1Q9UKB5 411 aaPredicted RBP10.73□□□□□ -0.69
USP39-214ENST00000474572 SAMM50Q9Y512 469 aa10.73□□□□□ -0.69
USP39-214ENST00000474572 DUSP10Q9Y6W6 482 aa10.73□□□□□ -0.69
USP39-214ENST00000474572 IGSF9BQ9UPX0 1349 aa10.73□□□□□ -0.69
USP39-214ENST00000474572 A0A087X0T9 212 aa10.72□□□□□ -0.69
USP39-214ENST00000474572 CCDC151A5D8V7 595 aa10.72□□□□□ -0.69
USP39-214ENST00000474572 ZNF862O60290 1169 aa10.72□□□□□ -0.69
USP39-214ENST00000474572 ATG7O95352 703 aa10.72□□□□□ -0.69
USP39-214ENST00000474572 TUBBP07437 444 aa10.72□□□□□ -0.69
USP39-214ENST00000474572 FAM228BP0C875 321 aa10.72□□□□□ -0.69
USP39-214ENST00000474572 RFX1P22670 979 aa10.72□□□□□ -0.69
USP39-214ENST00000474572 EDNRBP24530 442 aa10.72□□□□□ -0.69
USP39-214ENST00000474572 ITIH3Q06033 890 aa10.72□□□□□ -0.69
USP39-214ENST00000474572 ENPEPQ07075 957 aa10.72□□□□□ -0.69
USP39-214ENST00000474572 KLHL30Q0D2K2 578 aa10.72□□□□□ -0.69
USP39-214ENST00000474572 BRD3Q15059 726 aa10.72□□□□□ -0.69
USP39-214ENST00000474572 TCERG1LQ5VWI1 586 aa10.72□□□□□ -0.69
USP39-214ENST00000474572 IQCEQ6IPM2 695 aa10.72□□□□□ -0.69
USP39-214ENST00000474572 ABHD15Q6UXT9 468 aa10.72□□□□□ -0.69
USP39-214ENST00000474572 INTS8Q75QN2 995 aaKnown RBP10.72□□□□□ -0.69
USP39-214ENST00000474572 ANO5Q75V66 913 aa10.72□□□□□ -0.69
USP39-214ENST00000474572 HAUS6Q7Z4H7 955 aa10.72□□□□□ -0.69
USP39-214ENST00000474572 RIOX2Q8IUF8 465 aa10.72□□□□□ -0.69
USP39-214ENST00000474572 MAP4K3Q8IVH8 894 aa10.72□□□□□ -0.69
USP39-214ENST00000474572 FAM133AQ8N9E0 248 aa10.72□□□□□ -0.69
USP39-214ENST00000474572 PROCA1Q8NCQ7 364 aaPredicted RBP10.72□□□□□ -0.69
USP39-214ENST00000474572 HNRNPLLQ8WVV9 542 aaKnown RBP10.72□□□□□ -0.69
USP39-214ENST00000474572 ATP6V0A1Q93050 837 aa10.72□□□□□ -0.69
USP39-214ENST00000474572 SYT11Q9BT88 431 aa10.72□□□□□ -0.69
USP39-214ENST00000474572 MLXIPQ9HAP2 919 aa10.72□□□□□ -0.69
USP39-214ENST00000474572 PUF60Q9UHX1 559 aaKnown RBP10.72□□□□□ -0.69
USP39-214ENST00000474572 SALL4Q9UJQ4 1053 aa10.72□□□□□ -0.69
USP39-214ENST00000474572 SNX12Q9UMY4 172 aa10.72□□□□□ -0.69
USP39-214ENST00000474572 FRMD4BQ9Y2L6 1034 aa10.72□□□□□ -0.69
USP39-214ENST00000474572 MYH9P35579 1960 aaKnown RBP10.72□□□□□ -0.69
USP39-214ENST00000474572 A0A0G2JLL6 359 aaPredicted RBP10.71□□□□□ -0.69
USP39-214ENST00000474572 MACROD2A1Z1Q3 448 aa10.71□□□□□ -0.69
USP39-214ENST00000474572 ENC1O14682 589 aa10.71□□□□□ -0.69
USP39-214ENST00000474572 N4BP1O75113 896 aaKnown RBP10.71□□□□□ -0.69
USP39-214ENST00000474572 DDNO94850 711 aaPredicted RBP10.71□□□□□ -0.69
USP39-214ENST00000474572 MOCS3O95396 460 aa10.71□□□□□ -0.69
USP39-214ENST00000474572 TFRCP02786 760 aaKnown RBP10.71□□□□□ -0.69
USP39-214ENST00000474572 PSAPP07602 524 aa10.71□□□□□ -0.69
USP39-214ENST00000474572 FERP16591 822 aa10.71□□□□□ -0.69
USP39-214ENST00000474572 MYH10P35580 1976 aa10.71□□□□□ -0.69
USP39-214ENST00000474572 BMS1Q14692 1282 aaKnown RBP10.71□□□□□ -0.69
USP39-214ENST00000474572 NAB2Q15742 525 aa10.71□□□□□ -0.69
USP39-214ENST00000474572 GNPTABQ3T906 1256 aa10.71□□□□□ -0.69
USP39-214ENST00000474572 CBWD6Q4V339 395 aa10.71□□□□□ -0.69
USP39-214ENST00000474572 XKR9Q5GH70 373 aa10.71□□□□□ -0.69
USP39-214ENST00000474572 CBWD3Q5JTY5 395 aa10.71□□□□□ -0.69
USP39-214ENST00000474572 CBWD5Q5RIA9 395 aa10.71□□□□□ -0.69
USP39-214ENST00000474572 C1orf220Q5T0J3 134 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms