RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 GRB10Q13322 594 aa17.88■□□□□ 0.45
ITGB1-210ENST00000474568 ORC2Q13416 577 aaPredicted RBP17.88■□□□□ 0.45
ITGB1-210ENST00000474568 EMC2Q15006 297 aa17.88■□□□□ 0.45
ITGB1-210ENST00000474568 PAN2Q504Q3 1202 aaKnown RBP17.88■□□□□ 0.45
ITGB1-210ENST00000474568 ODR4Q5SWX8 454 aa17.88■□□□□ 0.45
ITGB1-210ENST00000474568 LARP1BQ659C4 914 aaKnown RBP17.88■□□□□ 0.45
ITGB1-210ENST00000474568 NEK9Q8TD19 979 aa17.88■□□□□ 0.45
ITGB1-210ENST00000474568 SP7Q8TDD2 431 aaPredicted RBP17.88■□□□□ 0.45
ITGB1-210ENST00000474568 JPH2Q9BR39 696 aaPredicted RBP17.88■□□□□ 0.45
ITGB1-210ENST00000474568 LRFN2Q9ULH4 789 aa17.88■□□□□ 0.45
ITGB1-210ENST00000474568 EVPLQ92817 2033 aa17.88■□□□□ 0.45
ITGB1-210ENST00000474568 MED24O75448 989 aa17.87■□□□□ 0.45
ITGB1-210ENST00000474568 EIF4BP23588 611 aaKnown RBP17.87■□□□□ 0.45
ITGB1-210ENST00000474568 RFC5P40937 340 aa17.87■□□□□ 0.45
ITGB1-210ENST00000474568 PTGDRQ13258 359 aa17.87■□□□□ 0.45
ITGB1-210ENST00000474568 CUL4AQ13619 759 aa17.87■□□□□ 0.45
ITGB1-210ENST00000474568 NPAS4Q8IUM7 802 aa17.87■□□□□ 0.45
ITGB1-210ENST00000474568 FIBCD1Q8N539 461 aa17.87■□□□□ 0.45
ITGB1-210ENST00000474568 C4orf32Q8N8J7 132 aa17.87■□□□□ 0.45
ITGB1-210ENST00000474568 GCOM2Q9BZD3 368 aaPredicted RBP17.87■□□□□ 0.45
ITGB1-210ENST00000474568 DHX33Q9H6R0 707 aaKnown RBP17.87■□□□□ 0.45
ITGB1-210ENST00000474568 PRDM6Q9NQX0 595 aa17.87■□□□□ 0.45
ITGB1-210ENST00000474568 CHD7Q9P2D1 2997 aa17.86■□□□□ 0.45
ITGB1-210ENST00000474568 GTPBP6O43824 516 aaPredicted RBP17.86■□□□□ 0.45
ITGB1-210ENST00000474568 STAG3L1P0CL83 205 aa17.86■□□□□ 0.45
ITGB1-210ENST00000474568 SPATA31C1P0DKV0 1188 aa17.86■□□□□ 0.45
ITGB1-210ENST00000474568 SARSP49591 514 aaKnown RBP17.86■□□□□ 0.45
ITGB1-210ENST00000474568 BTG3Q14201 252 aaPredicted RBP17.86■□□□□ 0.45
ITGB1-210ENST00000474568 POTEGQ6S5H5 508 aa17.86■□□□□ 0.45
ITGB1-210ENST00000474568 CATSPER3Q86XQ3 398 aa17.86■□□□□ 0.45
ITGB1-210ENST00000474568 FBXO22Q8NEZ5 403 aa17.86■□□□□ 0.45
ITGB1-210ENST00000474568 RGS18Q9NS28 235 aa17.86■□□□□ 0.45
ITGB1-210ENST00000474568 COL4A3BPQ9Y5P4 624 aa17.86■□□□□ 0.45
ITGB1-210ENST00000474568 ADGRA3Q8IWK6 1321 aa17.86■□□□□ 0.45
ITGB1-210ENST00000474568 VPS37CA5D8V6 355 aaPredicted RBP17.85■□□□□ 0.45
ITGB1-210ENST00000474568 USO1O60763 962 aaKnown RBP17.85■□□□□ 0.45
ITGB1-210ENST00000474568 DGKIO75912 1065 aa17.85■□□□□ 0.45
ITGB1-210ENST00000474568 LYPLA2O95372 231 aa17.85■□□□□ 0.45
ITGB1-210ENST00000474568 SRGAP2CP0DJJ0 459 aa17.85■□□□□ 0.45
ITGB1-210ENST00000474568 MYO9BQ13459 2157 aa17.85■□□□□ 0.45
ITGB1-210ENST00000474568 DSC3Q14574 896 aa17.85■□□□□ 0.45
ITGB1-210ENST00000474568 EPC2Q52LR7 807 aa17.85■□□□□ 0.45
ITGB1-210ENST00000474568 WDR81Q562E7 1941 aa17.85■□□□□ 0.45
ITGB1-210ENST00000474568 MAEAQ7L5Y9 396 aa17.85■□□□□ 0.45
ITGB1-210ENST00000474568 RNF169Q8NCN4 708 aa17.85■□□□□ 0.45
ITGB1-210ENST00000474568 ERMNQ8TAM6 284 aa17.85■□□□□ 0.45
ITGB1-210ENST00000474568 PRPF31Q8WWY3 499 aaKnown RBP17.85■□□□□ 0.45
ITGB1-210ENST00000474568 PSPC1Q8WXF1 523 aaKnown RBP17.85■□□□□ 0.45
ITGB1-210ENST00000474568 MTRQ99707 1265 aa17.85■□□□□ 0.45
ITGB1-210ENST00000474568 XPNPEP1Q9NQW7 623 aa17.85■□□□□ 0.45
ITGB1-210ENST00000474568 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.85■□□□□ 0.45
ITGB1-210ENST00000474568 C1orf112Q9NSG2 853 aa17.85■□□□□ 0.45
ITGB1-210ENST00000474568 ANKEF1Q9NU02 776 aa17.85■□□□□ 0.45
ITGB1-210ENST00000474568 PPME1Q9Y570 386 aa17.85■□□□□ 0.45
ITGB1-210ENST00000474568 PCDHB7Q9Y5E2 793 aa17.85■□□□□ 0.45
ITGB1-210ENST00000474568 MTCH2Q9Y6C9 303 aa17.85■□□□□ 0.45
ITGB1-210ENST00000474568 C9IYK1 514 aa17.84■□□□□ 0.45
ITGB1-210ENST00000474568 LPXNO60711 386 aa17.84■□□□□ 0.45
ITGB1-210ENST00000474568 CSPG5O95196 566 aa17.84■□□□□ 0.45
ITGB1-210ENST00000474568 ZSCAN20P17040 1043 aaPredicted RBP17.84■□□□□ 0.45
ITGB1-210ENST00000474568 CTNNB1P35222 781 aa17.84■□□□□ 0.45
ITGB1-210ENST00000474568 CCT6AP40227 531 aaKnown RBP17.84■□□□□ 0.45
ITGB1-210ENST00000474568 RARRES1P49788 294 aa17.84■□□□□ 0.45
ITGB1-210ENST00000474568 LAMTOR4Q0VGL1 99 aa17.84■□□□□ 0.45
ITGB1-210ENST00000474568 SLC24A5Q71RS6 500 aa17.84■□□□□ 0.45
ITGB1-210ENST00000474568 FERMT3Q86UX7 667 aa17.84■□□□□ 0.45
ITGB1-210ENST00000474568 ZNF410Q86VK4 478 aa17.84■□□□□ 0.45
ITGB1-210ENST00000474568 TMEM192Q8IY95 271 aa17.84■□□□□ 0.45
ITGB1-210ENST00000474568 ZNF710Q8N1W2 664 aa17.84■□□□□ 0.45
ITGB1-210ENST00000474568 ZNF689Q96CS4 500 aaPredicted RBP17.84■□□□□ 0.45
ITGB1-210ENST00000474568 RC3H2Q9HBD1 1191 aaKnown RBP17.84■□□□□ 0.45
ITGB1-210ENST00000474568 ATP6V0A4Q9HBG4 840 aa17.84■□□□□ 0.45
ITGB1-210ENST00000474568 TUFT1Q9NNX1 390 aa17.84■□□□□ 0.45
ITGB1-210ENST00000474568 LRWD1Q9UFC0 647 aa17.84■□□□□ 0.45
ITGB1-210ENST00000474568 TBKBP1A7MCY6 615 aa17.83■□□□□ 0.44
ITGB1-210ENST00000474568 PP2D1A8MPX8 630 aa17.83■□□□□ 0.44
ITGB1-210ENST00000474568 FGFR1P11362 822 aa17.83■□□□□ 0.44
ITGB1-210ENST00000474568 FXR2P51116 673 aaKnown RBP eCLIP17.83■□□□□ 0.442e-7■■□□□ 11.5
ITGB1-210ENST00000474568 CDC42EP1Q00587 391 aa17.83■□□□□ 0.44
ITGB1-210ENST00000474568 SKIV2LQ15477 1246 aaKnown RBP17.83■□□□□ 0.44
ITGB1-210ENST00000474568 IL17AQ16552 155 aa17.83■□□□□ 0.44
ITGB1-210ENST00000474568 ECM1Q16610 540 aa17.83■□□□□ 0.44
ITGB1-210ENST00000474568 RILPL1Q5EBL4 403 aa17.83■□□□□ 0.44
ITGB1-210ENST00000474568 FAM102BQ5T8I3 360 aa17.83■□□□□ 0.44
ITGB1-210ENST00000474568 CATSPER4Q7RTX7 472 aa17.83■□□□□ 0.44
ITGB1-210ENST00000474568 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.83■□□□□ 0.44
ITGB1-210ENST00000474568 EXOC8Q8IYI6 725 aa17.83■□□□□ 0.44
ITGB1-210ENST00000474568 CRIPAKQ8N1N5 446 aa17.83■□□□□ 0.44
ITGB1-210ENST00000474568 TCP11Q8WWU5 503 aa17.83■□□□□ 0.44
ITGB1-210ENST00000474568 POLR3CQ9BUI4 534 aaPredicted RBP17.83■□□□□ 0.44
ITGB1-210ENST00000474568 PIN4Q9Y237 131 aaKnown RBP17.83■□□□□ 0.44
ITGB1-210ENST00000474568 MRPL42Q9Y6G3 142 aaKnown RBP17.83■□□□□ 0.44
ITGB1-210ENST00000474568 EYSQ5T1H1 3165 aa17.83■□□□□ 0.44
ITGB1-210ENST00000474568 K7ELQ4 463 aaPredicted RBP17.82■□□□□ 0.44
ITGB1-210ENST00000474568 SFPQP23246 707 aaKnown RBP eCLIP17.82■□□□□ 0.44
ITGB1-210ENST00000474568 CDC25AP30304 524 aa17.82■□□□□ 0.44
ITGB1-210ENST00000474568 GPM6BQ13491 265 aa17.82■□□□□ 0.44
ITGB1-210ENST00000474568 HAUS3Q68CZ6 603 aa17.82■□□□□ 0.44
ITGB1-210ENST00000474568 RNF149Q8NC42 400 aa17.82■□□□□ 0.44
ITGB1-210ENST00000474568 ASAP3Q8TDY4 903 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms