RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 ELF4Q99607 663 aaPredicted RBP4.59□□□□□ -1.67
ECHDC1-213ENST00000474240 MSL2Q9HCI7 577 aa4.59□□□□□ -1.67
ECHDC1-213ENST00000474240 SLC39A2Q9NP94 309 aa4.59□□□□□ -1.67
ECHDC1-213ENST00000474240 KCNG1Q9UIX4 513 aa4.59□□□□□ -1.67
ECHDC1-213ENST00000474240 TNFRSF18Q9Y5U5 241 aa4.59□□□□□ -1.67
ECHDC1-213ENST00000474240 WDR33Q9C0J8 1336 aaKnown RBP4.58□□□□□ -1.68
ECHDC1-213ENST00000474240 ST20-MTHFSA0A0A6YYL1 179 aa4.58□□□□□ -1.68
ECHDC1-213ENST00000474240 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.58□□□□□ -1.68
ECHDC1-213ENST00000474240 PRAMEF22A3QJZ6 481 aa4.58□□□□□ -1.68
ECHDC1-213ENST00000474240 PRLP01236 227 aa4.58□□□□□ -1.68
ECHDC1-213ENST00000474240 POLD1P28340 1107 aa4.58□□□□□ -1.68
ECHDC1-213ENST00000474240 ADCYAP1R1P41586 468 aa4.58□□□□□ -1.68
ECHDC1-213ENST00000474240 GLRBP48167 497 aa4.58□□□□□ -1.68
ECHDC1-213ENST00000474240 SESN2P58004 480 aaPredicted RBP4.58□□□□□ -1.68
ECHDC1-213ENST00000474240 SMAD3P84022 425 aaKnown RBP4.58□□□□□ -1.68
ECHDC1-213ENST00000474240 DDB1Q16531 1140 aa4.58□□□□□ -1.68
ECHDC1-213ENST00000474240 WDR72Q3MJ13 1102 aa4.58□□□□□ -1.68
ECHDC1-213ENST00000474240 ZNF568Q3ZCX4 644 aa4.58□□□□□ -1.68
ECHDC1-213ENST00000474240 SLFN12LQ6IEE8 588 aa4.58□□□□□ -1.68
ECHDC1-213ENST00000474240 FRMD7Q6ZUT3 714 aa4.58□□□□□ -1.68
ECHDC1-213ENST00000474240 ESPNLQ6ZVH7 1005 aa4.58□□□□□ -1.68
ECHDC1-213ENST00000474240 NECAB2Q7Z6G3 386 aa4.58□□□□□ -1.68
ECHDC1-213ENST00000474240 RTN4RL1Q86UN2 441 aaPredicted RBP4.58□□□□□ -1.68
ECHDC1-213ENST00000474240 STK32CQ86UX6 486 aa4.58□□□□□ -1.68
ECHDC1-213ENST00000474240 SPATS2Q86XZ4 545 aaKnown RBP4.58□□□□□ -1.68
ECHDC1-213ENST00000474240 NXPE1Q8N323 547 aa4.58□□□□□ -1.68
ECHDC1-213ENST00000474240 RSAD2Q8WXG1 361 aa4.58□□□□□ -1.68
ECHDC1-213ENST00000474240 WWC2-AS2Q96NR7 200 aa4.58□□□□□ -1.68
ECHDC1-213ENST00000474240 GPR101Q96P66 508 aaPredicted RBP4.58□□□□□ -1.68
ECHDC1-213ENST00000474240 EMC7Q9NPA0 242 aa4.58□□□□□ -1.68
ECHDC1-213ENST00000474240 UCKL1Q9NWZ5 548 aa4.58□□□□□ -1.68
ECHDC1-213ENST00000474240 SYNPO2Q9UMS6 1093 aa4.58□□□□□ -1.68
ECHDC1-213ENST00000474240 ANKRD62A6NC57 917 aa4.57□□□□□ -1.68
ECHDC1-213ENST00000474240 RASSF10A6NK89 507 aa4.57□□□□□ -1.68
ECHDC1-213ENST00000474240 DDX3XO00571 662 aaKnown RBP eCLIP4.57□□□□□ -1.68
ECHDC1-213ENST00000474240 DVL2O14641 736 aa4.57□□□□□ -1.68
ECHDC1-213ENST00000474240 MPIG6BO95866 241 aa4.57□□□□□ -1.68
ECHDC1-213ENST00000474240 SLC9A1P19634 815 aa4.57□□□□□ -1.68
ECHDC1-213ENST00000474240 ETV4P43268 484 aa4.57□□□□□ -1.68
ECHDC1-213ENST00000474240 STRN3Q13033 797 aa4.57□□□□□ -1.68
ECHDC1-213ENST00000474240 ZMAT1Q5H9K5 638 aa4.57□□□□□ -1.68
ECHDC1-213ENST00000474240 GRAMD4Q6IC98 578 aa4.57□□□□□ -1.68
ECHDC1-213ENST00000474240 FSTL4Q6MZW2 842 aa4.57□□□□□ -1.68
ECHDC1-213ENST00000474240 FAM177A1Q8N128 213 aaPredicted RBP4.57□□□□□ -1.68
ECHDC1-213ENST00000474240 STPG3Q8N7X2 389 aa4.57□□□□□ -1.68
ECHDC1-213ENST00000474240 ZCCHC14Q8WYQ9 949 aaKnown RBP4.57□□□□□ -1.68
ECHDC1-213ENST00000474240 SLC5A5Q92911 643 aa4.57□□□□□ -1.68
ECHDC1-213ENST00000474240 LPPQ93052 612 aa4.57□□□□□ -1.68
ECHDC1-213ENST00000474240 FOXRED1Q96CU9 486 aaPredicted RBP4.57□□□□□ -1.68
ECHDC1-213ENST00000474240 TUBGCP5Q96RT8 1024 aa4.57□□□□□ -1.68
ECHDC1-213ENST00000474240 TACO1Q9BSH4 297 aaKnown RBP4.57□□□□□ -1.68
ECHDC1-213ENST00000474240 KCMF1Q9P0J7 381 aa4.57□□□□□ -1.68
ECHDC1-213ENST00000474240 RBPJLQ9UBG7 517 aa4.57□□□□□ -1.68
ECHDC1-213ENST00000474240 WASF3Q9UPY6 502 aa4.57□□□□□ -1.68
ECHDC1-213ENST00000474240 VWA7Q9Y334 891 aa4.57□□□□□ -1.68
ECHDC1-213ENST00000474240 A0A0G2JNJ9 132 aa4.56□□□□□ -1.68
ECHDC1-213ENST00000474240 ALG1L2C9J202 215 aa4.56□□□□□ -1.68
ECHDC1-213ENST00000474240 KLHL18O94889 574 aa4.56□□□□□ -1.68
ECHDC1-213ENST00000474240 IL18BPO95998 194 aa4.56□□□□□ -1.68
ECHDC1-213ENST00000474240 COL6A1P12109 1028 aa4.56□□□□□ -1.68
ECHDC1-213ENST00000474240 MC4RP32245 332 aa4.56□□□□□ -1.68
ECHDC1-213ENST00000474240 MLLT6P55198 1093 aaPredicted RBP4.56□□□□□ -1.68
ECHDC1-213ENST00000474240 NANOS3P60323 173 aaKnown RBP4.56□□□□□ -1.68
ECHDC1-213ENST00000474240 IL13RA1P78552 427 aa4.56□□□□□ -1.68
ECHDC1-213ENST00000474240 SLC6A3Q01959 620 aa4.56□□□□□ -1.68
ECHDC1-213ENST00000474240 TERF2Q15554 542 aa4.56□□□□□ -1.68
ECHDC1-213ENST00000474240 CCDC178Q5BJE1 867 aa4.56□□□□□ -1.68
ECHDC1-213ENST00000474240 PRAMEF9Q5VWM5 478 aa4.56□□□□□ -1.68
ECHDC1-213ENST00000474240 KANK2Q63ZY3 851 aa4.56□□□□□ -1.68
ECHDC1-213ENST00000474240 TMEM200BQ69YZ2 307 aa4.56□□□□□ -1.68
ECHDC1-213ENST00000474240 IGFL4Q6B9Z1 124 aa4.56□□□□□ -1.68
ECHDC1-213ENST00000474240 KIAA1841Q6NSI8 718 aa4.56□□□□□ -1.68
ECHDC1-213ENST00000474240 Q6ZUG5 572 aa4.56□□□□□ -1.68
ECHDC1-213ENST00000474240 OTOP2Q7RTS6 562 aa4.56□□□□□ -1.68
ECHDC1-213ENST00000474240 BMP8AQ7Z5Y6 402 aa4.56□□□□□ -1.68
ECHDC1-213ENST00000474240 RALYLQ86SE5 291 aaKnown RBP4.56□□□□□ -1.68
ECHDC1-213ENST00000474240 RASSF3Q86WH2 238 aa4.56□□□□□ -1.68
ECHDC1-213ENST00000474240 ATL2Q8NHH9 583 aa4.56□□□□□ -1.68
ECHDC1-213ENST00000474240 ERCC4Q92889 916 aaPredicted RBP4.56□□□□□ -1.68
ECHDC1-213ENST00000474240 FERMT2Q96AC1 680 aa4.56□□□□□ -1.68
ECHDC1-213ENST00000474240 AJUBAQ96IF1 538 aa4.56□□□□□ -1.68
ECHDC1-213ENST00000474240 ACAP3Q96P50 834 aa4.56□□□□□ -1.68
ECHDC1-213ENST00000474240 AMNQ9BXJ7 453 aa4.56□□□□□ -1.68
ECHDC1-213ENST00000474240 CARD11Q9BXL7 1154 aa4.56□□□□□ -1.68
ECHDC1-213ENST00000474240 KATNBL1Q9H079 304 aa4.56□□□□□ -1.68
ECHDC1-213ENST00000474240 IKZF4Q9H2S9 585 aa4.56□□□□□ -1.68
ECHDC1-213ENST00000474240 ZMAT4Q9H898 229 aa4.56□□□□□ -1.68
ECHDC1-213ENST00000474240 SPTLC3Q9NUV7 552 aa4.56□□□□□ -1.68
ECHDC1-213ENST00000474240 Q9UFV3 132 aa4.56□□□□□ -1.68
ECHDC1-213ENST00000474240 ADAM29Q9UKF5 820 aa4.56□□□□□ -1.68
ECHDC1-213ENST00000474240 NEMP1O14524 444 aa4.55□□□□□ -1.68
ECHDC1-213ENST00000474240 GPR39O43194 453 aa4.55□□□□□ -1.68
ECHDC1-213ENST00000474240 HMGCRP04035 888 aa4.55□□□□□ -1.68
ECHDC1-213ENST00000474240 PTX3P26022 381 aaPredicted RBP4.55□□□□□ -1.68
ECHDC1-213ENST00000474240 GPR15P49685 360 aa4.55□□□□□ -1.68
ECHDC1-213ENST00000474240 ADCY2Q08462 1091 aa4.55□□□□□ -1.68
ECHDC1-213ENST00000474240 ABHD18Q0P651 414 aa4.55□□□□□ -1.68
ECHDC1-213ENST00000474240 TOP3AQ13472 1001 aaPredicted RBP4.55□□□□□ -1.68
ECHDC1-213ENST00000474240 USP10Q14694 798 aaKnown RBP4.55□□□□□ -1.68
ECHDC1-213ENST00000474240 STAT4Q14765 748 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms