RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 YWHABP31946 246 aaKnown RBP12.89□□□□□ -0.35
CPNE1-222ENST00000473373 ERVK-21P61565 698 aa12.89□□□□□ -0.35
CPNE1-222ENST00000473373 HTRA4P83105 476 aaPredicted RBP12.89□□□□□ -0.35
CPNE1-222ENST00000473373 CDC42EP1Q00587 391 aa12.89□□□□□ -0.35
CPNE1-222ENST00000473373 GRB10Q13322 594 aa12.89□□□□□ -0.35
CPNE1-222ENST00000473373 ZNF174Q15697 407 aa12.89□□□□□ -0.35
CPNE1-222ENST00000473373 PTPROQ16827 1216 aa12.89□□□□□ -0.35
CPNE1-222ENST00000473373 AAK1Q2M2I8 961 aa12.89□□□□□ -0.35
CPNE1-222ENST00000473373 TTC38Q5R3I4 469 aa12.89□□□□□ -0.35
CPNE1-222ENST00000473373 SPRED2Q7Z698 418 aa12.89□□□□□ -0.35
CPNE1-222ENST00000473373 ABI1Q8IZP0 508 aa12.89□□□□□ -0.35
CPNE1-222ENST00000473373 RNF169Q8NCN4 708 aa12.89□□□□□ -0.35
CPNE1-222ENST00000473373 ERMNQ8TAM6 284 aa12.89□□□□□ -0.35
CPNE1-222ENST00000473373 HAS1Q92839 578 aa12.89□□□□□ -0.35
CPNE1-222ENST00000473373 TNFRSF25Q93038 417 aa12.89□□□□□ -0.35
CPNE1-222ENST00000473373 C1QTNF1Q9BXJ1 281 aa12.89□□□□□ -0.35
CPNE1-222ENST00000473373 NIFKQ9BYG3 293 aaKnown RBP12.89□□□□□ -0.35
CPNE1-222ENST00000473373 GCOM2Q9BZD3 368 aaPredicted RBP12.89□□□□□ -0.35
CPNE1-222ENST00000473373 ZSWIM4Q9H7M6 989 aa12.89□□□□□ -0.35
CPNE1-222ENST00000473373 CYP26B1Q9NR63 512 aa12.89□□□□□ -0.35
CPNE1-222ENST00000473373 C1orf112Q9NSG2 853 aa12.89□□□□□ -0.35
CPNE1-222ENST00000473373 RGL1Q9NZL6 768 aa12.89□□□□□ -0.35
CPNE1-222ENST00000473373 SUCLA2Q9P2R7 463 aaPredicted RBP12.89□□□□□ -0.35
CPNE1-222ENST00000473373 SMC3Q9UQE7 1217 aa12.89□□□□□ -0.35
CPNE1-222ENST00000473373 RWDD3Q9Y3V2 267 aa12.89□□□□□ -0.35
CPNE1-222ENST00000473373 MTCH2Q9Y6C9 303 aa12.89□□□□□ -0.35
CPNE1-222ENST00000473373 CHD7Q9P2D1 2997 aa12.88□□□□□ -0.35
CPNE1-222ENST00000473373 EPOPA6NHQ4 379 aa12.88□□□□□ -0.35
CPNE1-222ENST00000473373 SFPQP23246 707 aaKnown RBP eCLIP12.88□□□□□ -0.35
CPNE1-222ENST00000473373 SARSP49591 514 aaKnown RBP12.88□□□□□ -0.35
CPNE1-222ENST00000473373 GPC3P51654 580 aa12.88□□□□□ -0.35
CPNE1-222ENST00000473373 NPEPPSP55786 919 aa12.88□□□□□ -0.35
CPNE1-222ENST00000473373 GPM6BQ13491 265 aa12.88□□□□□ -0.35
CPNE1-222ENST00000473373 EPC2Q52LR7 807 aa12.88□□□□□ -0.35
CPNE1-222ENST00000473373 EP400NLQ6ZTU2 488 aa12.88□□□□□ -0.35
CPNE1-222ENST00000473373 FAM228AQ86W67 206 aa12.88□□□□□ -0.35
CPNE1-222ENST00000473373 NOSTRINQ8IVI9 506 aa12.88□□□□□ -0.35
CPNE1-222ENST00000473373 TMEM192Q8IY95 271 aa12.88□□□□□ -0.35
CPNE1-222ENST00000473373 FBXO18Q8NFZ0 1043 aa12.88□□□□□ -0.35
CPNE1-222ENST00000473373 NEK9Q8TD19 979 aa12.88□□□□□ -0.35
CPNE1-222ENST00000473373 TMEM40Q8WWA1 233 aa12.88□□□□□ -0.35
CPNE1-222ENST00000473373 TCP11Q8WWU5 503 aa12.88□□□□□ -0.35
CPNE1-222ENST00000473373 TMX3Q96JJ7 454 aa12.88□□□□□ -0.35
CPNE1-222ENST00000473373 TBC1D32Q96NH3 1257 aa12.88□□□□□ -0.35
CPNE1-222ENST00000473373 EIF2AK1Q9BQI3 630 aaKnown RBP12.88□□□□□ -0.35
CPNE1-222ENST00000473373 INO80BQ9C086 356 aaPredicted RBP12.88□□□□□ -0.35
CPNE1-222ENST00000473373 EPHX3Q9H6B9 360 aa12.88□□□□□ -0.35
CPNE1-222ENST00000473373 ERVK-5Q9HDB9 667 aa12.88□□□□□ -0.35
CPNE1-222ENST00000473373 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.88□□□□□ -0.35
CPNE1-222ENST00000473373 REV3LO60673 3130 aa12.87□□□□□ -0.35
CPNE1-222ENST00000473373 PLXNA4Q9HCM2 1894 aa12.87□□□□□ -0.35
CPNE1-222ENST00000473373 POTEMA6NI47 508 aa12.87□□□□□ -0.35
CPNE1-222ENST00000473373 GPR32O75388 356 aa12.87□□□□□ -0.35
CPNE1-222ENST00000473373 OR52Z1P0C646 297 aa12.87□□□□□ -0.35
CPNE1-222ENST00000473373 FGFR4P22455 802 aa12.87□□□□□ -0.35
CPNE1-222ENST00000473373 EIF4BP23588 611 aaKnown RBP12.87□□□□□ -0.35
CPNE1-222ENST00000473373 GJB2P29033 226 aa12.87□□□□□ -0.35
CPNE1-222ENST00000473373 RFC5P40937 340 aa12.87□□□□□ -0.35
CPNE1-222ENST00000473373 TECP42680 631 aa12.87□□□□□ -0.35
CPNE1-222ENST00000473373 SLC24A5Q71RS6 500 aa12.87□□□□□ -0.35
CPNE1-222ENST00000473373 ANO5Q75V66 913 aa12.87□□□□□ -0.35
CPNE1-222ENST00000473373 C4orf19Q8IY42 314 aa12.87□□□□□ -0.35
CPNE1-222ENST00000473373 PSPC1Q8WXF1 523 aaKnown RBP12.87□□□□□ -0.35
CPNE1-222ENST00000473373 MTRQ99707 1265 aa12.87□□□□□ -0.35
CPNE1-222ENST00000473373 RAB34Q9BZG1 259 aa12.87□□□□□ -0.35
CPNE1-222ENST00000473373 ATP6V0A4Q9HBG4 840 aa12.87□□□□□ -0.35
CPNE1-222ENST00000473373 ATG2AQ2TAZ0 1938 aa12.86□□□□□ -0.35
CPNE1-222ENST00000473373 A0A087WZ62 844 aa12.86□□□□□ -0.35
CPNE1-222ENST00000473373 TBKBP1A7MCY6 615 aa12.86□□□□□ -0.35
CPNE1-222ENST00000473373 MAFO75444 373 aaPredicted RBP12.86□□□□□ -0.35
CPNE1-222ENST00000473373 DGKIO75912 1065 aa12.86□□□□□ -0.35
CPNE1-222ENST00000473373 SRGAP2CP0DJJ0 459 aa12.86□□□□□ -0.35
CPNE1-222ENST00000473373 ORC2Q13416 577 aaPredicted RBP12.86□□□□□ -0.35
CPNE1-222ENST00000473373 MKRN4PQ13434 485 aaPredicted RBP12.86□□□□□ -0.35
CPNE1-222ENST00000473373 DRP2Q13474 957 aa12.86□□□□□ -0.35
CPNE1-222ENST00000473373 EMC2Q15006 297 aa12.86□□□□□ -0.35
CPNE1-222ENST00000473373 TARBP2Q15633 366 aaKnown RBP12.86□□□□□ -0.35
CPNE1-222ENST00000473373 TWF2Q6IBS0 349 aaKnown RBP12.86□□□□□ -0.35
CPNE1-222ENST00000473373 B3GNT9Q6UX72 402 aa12.86□□□□□ -0.35
CPNE1-222ENST00000473373 CATSPER4Q7RTX7 472 aa12.86□□□□□ -0.35
CPNE1-222ENST00000473373 ZNF410Q86VK4 478 aa12.86□□□□□ -0.35
CPNE1-222ENST00000473373 SP7Q8TDD2 431 aaPredicted RBP12.86□□□□□ -0.35
CPNE1-222ENST00000473373 LINC01599Q8WXQ3 324 aa12.86□□□□□ -0.35
CPNE1-222ENST00000473373 TMEM143Q96AN5 459 aa12.86□□□□□ -0.35
CPNE1-222ENST00000473373 FDXACB1Q9BRP7 624 aaPredicted RBP12.86□□□□□ -0.35
CPNE1-222ENST00000473373 C11orf84Q9BUA3 381 aaPredicted RBP12.86□□□□□ -0.35
CPNE1-222ENST00000473373 DACT1Q9NYF0 836 aa12.86□□□□□ -0.35
CPNE1-222ENST00000473373 PIN4Q9Y237 131 aaKnown RBP12.86□□□□□ -0.35
CPNE1-222ENST00000473373 PPME1Q9Y570 386 aa12.86□□□□□ -0.35
CPNE1-222ENST00000473373 COL4A3BPQ9Y5P4 624 aa12.86□□□□□ -0.35
CPNE1-222ENST00000473373 TDRD15B5MCY1 1934 aaKnown RBP12.86□□□□□ -0.35
CPNE1-222ENST00000473373 WNT7AO00755 349 aa12.85□□□□□ -0.35
CPNE1-222ENST00000473373 HOXA2O43364 376 aa12.85□□□□□ -0.35
CPNE1-222ENST00000473373 GAS2O43903 313 aaKnown RBP12.85□□□□□ -0.35
CPNE1-222ENST00000473373 MGEA5O60502 916 aa12.85□□□□□ -0.35
CPNE1-222ENST00000473373 CSDE1O75534 798 aaKnown RBP12.85□□□□□ -0.35
CPNE1-222ENST00000473373 ERLIN2O94905 339 aa12.85□□□□□ -0.35
CPNE1-222ENST00000473373 DARSP14868 501 aaKnown RBP12.85□□□□□ -0.35
CPNE1-222ENST00000473373 POU3F3P20264 500 aaPredicted RBP12.85□□□□□ -0.35
CPNE1-222ENST00000473373 TRAPPC10P48553 1259 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms