RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 XKR9Q5GH70 373 aa14.65□□□□□ -0.06
TPM3-216ENST00000473036 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.65□□□□□ -0.064e-6■□□□□ 9.7
TPM3-216ENST00000473036 KSR1Q8IVT5 923 aa14.65□□□□□ -0.06
TPM3-216ENST00000473036 NME8Q8N427 588 aa14.65□□□□□ -0.06
TPM3-216ENST00000473036 LINC01599Q8WXQ3 324 aa14.65□□□□□ -0.06
TPM3-216ENST00000473036 PNMA5Q96PV4 448 aa14.65□□□□□ -0.06
TPM3-216ENST00000473036 CELF4Q9BZC1 486 aaKnown RBP14.65□□□□□ -0.06
TPM3-216ENST00000473036 SUGCTQ9HAC7 445 aa14.65□□□□□ -0.06
TPM3-216ENST00000473036 YBX2Q9Y2T7 364 aaKnown RBP14.65□□□□□ -0.06
TPM3-216ENST00000473036 TRPV2Q9Y5S1 764 aa14.65□□□□□ -0.06
TPM3-216ENST00000473036 MYO9BQ13459 2157 aa14.64□□□□□ -0.07
TPM3-216ENST00000473036 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.64□□□□□ -0.07
TPM3-216ENST00000473036 GTPBP6O43824 516 aaPredicted RBP14.64□□□□□ -0.07
TPM3-216ENST00000473036 PARNO95453 639 aaKnown RBP14.64□□□□□ -0.07
TPM3-216ENST00000473036 F13A1P00488 732 aa14.64□□□□□ -0.07
TPM3-216ENST00000473036 ATP2A2P16615 1042 aaKnown RBP14.64□□□□□ -0.07
TPM3-216ENST00000473036 MARCKSP29966 332 aaPredicted RBP14.64□□□□□ -0.07
TPM3-216ENST00000473036 CD52P31358 61 aa14.64□□□□□ -0.07
TPM3-216ENST00000473036 GPC3P51654 580 aa14.64□□□□□ -0.07
TPM3-216ENST00000473036 DEFB103AP81534 67 aa14.64□□□□□ -0.07
TPM3-216ENST00000473036 CCDC85BQ15834 202 aaPredicted RBP14.64□□□□□ -0.07
TPM3-216ENST00000473036 TMEM266Q2M3C6 531 aa14.64□□□□□ -0.07
TPM3-216ENST00000473036 FOXD4L6Q3SYB3 417 aaPredicted RBP14.64□□□□□ -0.07
TPM3-216ENST00000473036 ARL6IP4Q66PJ3 421 aaKnown RBP14.64□□□□□ -0.07
TPM3-216ENST00000473036 CNKSR3Q6P9H4 555 aa14.64□□□□□ -0.07
TPM3-216ENST00000473036 FOXD4L3Q6VB84 417 aaPredicted RBP14.64□□□□□ -0.07
TPM3-216ENST00000473036 USP49Q70CQ1 688 aa14.64□□□□□ -0.07
TPM3-216ENST00000473036 RTN4RL1Q86UN2 441 aaPredicted RBP14.64□□□□□ -0.07
TPM3-216ENST00000473036 PHOSPHO2Q8TCD6 241 aa14.64□□□□□ -0.07
TPM3-216ENST00000473036 TMEM143Q96AN5 459 aa14.64□□□□□ -0.07
TPM3-216ENST00000473036 OSMRQ99650 979 aa14.64□□□□□ -0.07
TPM3-216ENST00000473036 TMX1Q9H3N1 280 aa14.64□□□□□ -0.07
TPM3-216ENST00000473036 ZSCAN16Q9H4T2 348 aaPredicted RBP14.64□□□□□ -0.07
TPM3-216ENST00000473036 ANKEF1Q9NU02 776 aa14.64□□□□□ -0.07
TPM3-216ENST00000473036 TFIP11Q9UBB9 837 aaKnown RBP14.64□□□□□ -0.07
TPM3-216ENST00000473036 FBXO2Q9UK22 296 aaPredicted RBP14.64□□□□□ -0.07
TPM3-216ENST00000473036 NOC2LQ9Y3T9 749 aaKnown RBP14.64□□□□□ -0.07
TPM3-216ENST00000473036 TCHHQ07283 1943 aa14.64□□□□□ -0.07
TPM3-216ENST00000473036 DKC1O60832 514 aaKnown RBP eCLIP14.63□□□□□ -0.07
TPM3-216ENST00000473036 BRD1O95696 1058 aa14.63□□□□□ -0.07
TPM3-216ENST00000473036 ACTN1P12814 892 aa14.63□□□□□ -0.07
TPM3-216ENST00000473036 HOXD11P31277 338 aaPredicted RBP14.63□□□□□ -0.07
TPM3-216ENST00000473036 DDIT3P35638 169 aa14.63□□□□□ -0.07
TPM3-216ENST00000473036 CCT6AP40227 531 aaKnown RBP14.63□□□□□ -0.07
TPM3-216ENST00000473036 NLRP11P59045 1033 aaKnown RBP14.63□□□□□ -0.07
TPM3-216ENST00000473036 WDR5P61964 334 aaKnown RBP14.63□□□□□ -0.07
TPM3-216ENST00000473036 GRB10Q13322 594 aa14.63□□□□□ -0.07
TPM3-216ENST00000473036 EMC2Q15006 297 aa14.63□□□□□ -0.07
TPM3-216ENST00000473036 IER5Q5VY09 327 aa14.63□□□□□ -0.07
TPM3-216ENST00000473036 RSPH3Q86UC2 560 aa14.63□□□□□ -0.07
TPM3-216ENST00000473036 FAM228AQ86W67 206 aa14.63□□□□□ -0.07
TPM3-216ENST00000473036 SNX29Q8TEQ0 813 aa14.63□□□□□ -0.07
TPM3-216ENST00000473036 CLIC6Q96NY7 704 aa14.63□□□□□ -0.07
TPM3-216ENST00000473036 SUCLA2Q9P2R7 463 aaPredicted RBP14.63□□□□□ -0.07
TPM3-216ENST00000473036 KIAA1024Q9UPX6 916 aa14.63□□□□□ -0.07
TPM3-216ENST00000473036 AKT3Q9Y243 479 aa14.63□□□□□ -0.07
TPM3-216ENST00000473036 GINS2Q9Y248 185 aa14.63□□□□□ -0.07
TPM3-216ENST00000473036 E9PMD0 336 aa14.62□□□□□ -0.07
TPM3-216ENST00000473036 MGEA5O60502 916 aa14.62□□□□□ -0.07
TPM3-216ENST00000473036 CSDE1O75534 798 aaKnown RBP14.62□□□□□ -0.07
TPM3-216ENST00000473036 XRCC6P12956 609 aaKnown RBP eCLIP14.62□□□□□ -0.079e-13■□□□□ 8.6
TPM3-216ENST00000473036 MYOGP15173 224 aa14.62□□□□□ -0.07
TPM3-216ENST00000473036 NASPP49321 788 aaPredicted RBP14.62□□□□□ -0.07
TPM3-216ENST00000473036 RABGGTBP53611 331 aa14.62□□□□□ -0.07
TPM3-216ENST00000473036 TTC3P53804 2025 aa14.62□□□□□ -0.07
TPM3-216ENST00000473036 SPECC1Q5M775 1068 aa14.62□□□□□ -0.07
TPM3-216ENST00000473036 HYIQ5T013 277 aa14.62□□□□□ -0.07
TPM3-216ENST00000473036 TSHZ1Q6ZSZ6 1077 aa14.62□□□□□ -0.07
TPM3-216ENST00000473036 OTUD6AQ7L8S5 288 aa14.62□□□□□ -0.07
TPM3-216ENST00000473036 PRPF31Q8WWY3 499 aaKnown RBP14.62□□□□□ -0.07
TPM3-216ENST00000473036 SLC9A7Q96T83 725 aa14.62□□□□□ -0.07
TPM3-216ENST00000473036 IFIH1Q9BYX4 1025 aaKnown RBP14.62□□□□□ -0.07
TPM3-216ENST00000473036 CSRNP2Q9H175 543 aa14.62□□□□□ -0.07
TPM3-216ENST00000473036 POLD4Q9HCU8 107 aa14.62□□□□□ -0.07
TPM3-216ENST00000473036 GPRC5CQ9NQ84 441 aa14.62□□□□□ -0.07
TPM3-216ENST00000473036 DDX19AQ9NUU7 478 aaKnown RBP14.62□□□□□ -0.07
TPM3-216ENST00000473036 DBR1Q9UK59 544 aaKnown RBP14.62□□□□□ -0.07
TPM3-216ENST00000473036 PADI3Q9ULW8 664 aa14.62□□□□□ -0.07
TPM3-216ENST00000473036 HCN4Q9Y3Q4 1203 aa14.62□□□□□ -0.07
TPM3-216ENST00000473036 COL4A6Q14031 1691 aa14.61□□□□□ -0.07
TPM3-216ENST00000473036 ZBBXA8MT70 800 aa14.61□□□□□ -0.07
TPM3-216ENST00000473036 ARHGEF15O94989 841 aa14.61□□□□□ -0.07
TPM3-216ENST00000473036 FGFR4P22455 802 aa14.61□□□□□ -0.07
TPM3-216ENST00000473036 RFC5P40937 340 aa14.61□□□□□ -0.07
TPM3-216ENST00000473036 CRYBB1P53674 252 aaPredicted RBP14.61□□□□□ -0.07
TPM3-216ENST00000473036 POLGP54098 1239 aaPredicted RBP14.61□□□□□ -0.07
TPM3-216ENST00000473036 SLC39A14Q15043 492 aa14.61□□□□□ -0.07
TPM3-216ENST00000473036 LINC00301Q8NCQ3 95 aa14.61□□□□□ -0.07
TPM3-216ENST00000473036 ERMNQ8TAM6 284 aa14.61□□□□□ -0.07
TPM3-216ENST00000473036 ASAP3Q8TDY4 903 aa14.61□□□□□ -0.07
TPM3-216ENST00000473036 NACC1Q96RE7 527 aa14.61□□□□□ -0.07
TPM3-216ENST00000473036 PLIN2Q99541 437 aa14.61□□□□□ -0.07
TPM3-216ENST00000473036 MINDY3Q9H8M7 445 aa14.61□□□□□ -0.07
TPM3-216ENST00000473036 IFT122Q9HBG6 1241 aa14.61□□□□□ -0.07
TPM3-216ENST00000473036 ERVK-5Q9HDB9 667 aa14.61□□□□□ -0.07
TPM3-216ENST00000473036 ST3GAL5Q9UNP4 418 aa14.61□□□□□ -0.07
TPM3-216ENST00000473036 SRPRBQ9Y5M8 271 aaKnown RBP14.61□□□□□ -0.07
TPM3-216ENST00000473036 SQORQ9Y6N5 450 aa14.61□□□□□ -0.07
TPM3-216ENST00000473036 MORC2Q9Y6X9 1032 aaPredicted RBP14.61□□□□□ -0.07
TPM3-216ENST00000473036 A0A087WZ62 844 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms