RNA–Protein interactions for RNA: ENST00000472610.5

COMMD3-210, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-210ENST00000472610 NLRP7Q8WX94 980 aa19.07■□□□□ 0.64
COMMD3-210ENST00000472610 HSD17B14Q9BPX1 270 aa19.07■□□□□ 0.64
COMMD3-210ENST00000472610 GCOM2Q9BZD3 368 aaPredicted RBP19.07■□□□□ 0.64
COMMD3-210ENST00000472610 INO80BQ9C086 356 aaPredicted RBP19.07■□□□□ 0.64
COMMD3-210ENST00000472610 TMEM60Q9H2L4 133 aa19.07■□□□□ 0.64
COMMD3-210ENST00000472610 RC3H2Q9HBD1 1191 aaKnown RBP19.07■□□□□ 0.64
COMMD3-210ENST00000472610 SUCLA2Q9P2R7 463 aaPredicted RBP19.07■□□□□ 0.64
COMMD3-210ENST00000472610 WRAP73Q9P2S5 460 aaPredicted RBP19.07■□□□□ 0.64
COMMD3-210ENST00000472610 PCDHB7Q9Y5E2 793 aa19.07■□□□□ 0.64
COMMD3-210ENST00000472610 COL4A4P53420 1690 aaPredicted RBP19.07■□□□□ 0.64
COMMD3-210ENST00000472610 CDH23Q9H251 3354 aa19.07■□□□□ 0.64
COMMD3-210ENST00000472610 CD2BP2O95400 341 aaKnown RBP19.06■□□□□ 0.64
COMMD3-210ENST00000472610 ZSCAN20P17040 1043 aaPredicted RBP19.06■□□□□ 0.64
COMMD3-210ENST00000472610 POLGP54098 1239 aaPredicted RBP19.06■□□□□ 0.64
COMMD3-210ENST00000472610 CYP4A11Q02928 519 aa19.06■□□□□ 0.64
COMMD3-210ENST00000472610 DRP2Q13474 957 aa19.06■□□□□ 0.64
COMMD3-210ENST00000472610 BTG3Q14201 252 aaPredicted RBP19.06■□□□□ 0.64
COMMD3-210ENST00000472610 ZNF174Q15697 407 aa19.06■□□□□ 0.64
COMMD3-210ENST00000472610 XKR9Q5GH70 373 aa19.06■□□□□ 0.64
COMMD3-210ENST00000472610 TTC38Q5R3I4 469 aa19.06■□□□□ 0.64
COMMD3-210ENST00000472610 CMTR2Q8IYT2 770 aaKnown RBP19.06■□□□□ 0.64
COMMD3-210ENST00000472610 MICALL1Q8N3F8 863 aa19.06■□□□□ 0.64
COMMD3-210ENST00000472610 BACH2Q9BYV9 841 aa19.06■□□□□ 0.64
COMMD3-210ENST00000472610 DHX33Q9H6R0 707 aaKnown RBP19.06■□□□□ 0.64
COMMD3-210ENST00000472610 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.06■□□□□ 0.64
COMMD3-210ENST00000472610 CHD7Q9P2D1 2997 aa19.06■□□□□ 0.64
COMMD3-210ENST00000472610 C9IYK1 514 aa19.05■□□□□ 0.64
COMMD3-210ENST00000472610 MGEA5O60502 916 aa19.05■□□□□ 0.64
COMMD3-210ENST00000472610 RB1P06400 928 aa19.05■□□□□ 0.64
COMMD3-210ENST00000472610 OR52Z1P0C646 297 aa19.05■□□□□ 0.64
COMMD3-210ENST00000472610 XRCC6P12956 609 aaKnown RBP eCLIP19.05■□□□□ 0.64
COMMD3-210ENST00000472610 DSC3Q14574 896 aa19.05■□□□□ 0.64
COMMD3-210ENST00000472610 RHPN2Q8IUC4 686 aa19.05■□□□□ 0.64
COMMD3-210ENST00000472610 GDPD5Q8WTR4 605 aa19.05■□□□□ 0.64
COMMD3-210ENST00000472610 TCP11Q8WWU5 503 aa19.05■□□□□ 0.64
COMMD3-210ENST00000472610 ELAC1Q9H777 363 aaKnown RBP19.05■□□□□ 0.64
COMMD3-210ENST00000472610 ANKEF1Q9NU02 776 aa19.05■□□□□ 0.64
COMMD3-210ENST00000472610 H3BNC9 293 aa19.04■□□□□ 0.64
COMMD3-210ENST00000472610 GJB2P29033 226 aa19.04■□□□□ 0.64
COMMD3-210ENST00000472610 FAM189BP81408 668 aa19.04■□□□□ 0.64
COMMD3-210ENST00000472610 ZNF579Q8NAF0 562 aaKnown RBP19.04■□□□□ 0.64
COMMD3-210ENST00000472610 CLP1Q92989 425 aaKnown RBP19.04■□□□□ 0.64
COMMD3-210ENST00000472610 ZNF668Q96K58 619 aaPredicted RBP19.04■□□□□ 0.64
COMMD3-210ENST00000472610 TUFT1Q9NNX1 390 aa19.04■□□□□ 0.64
COMMD3-210ENST00000472610 SMC3Q9UQE7 1217 aa19.04■□□□□ 0.64
COMMD3-210ENST00000472610 ARID2Q68CP9 1835 aa19.04■□□□□ 0.64
COMMD3-210ENST00000472610 A0A087WZ62 844 aa19.03■□□□□ 0.64
COMMD3-210ENST00000472610 POTEMA6NI47 508 aa19.03■□□□□ 0.64
COMMD3-210ENST00000472610 C5orf67F2Z3F1 127 aa19.03■□□□□ 0.64
COMMD3-210ENST00000472610 ASAP2O43150 1006 aa19.03■□□□□ 0.64
COMMD3-210ENST00000472610 SFPQP23246 707 aaKnown RBP eCLIP19.03■□□□□ 0.64
COMMD3-210ENST00000472610 BMPR1AP36894 532 aa19.03■□□□□ 0.64
COMMD3-210ENST00000472610 TECP42680 631 aa19.03■□□□□ 0.64
COMMD3-210ENST00000472610 GPM6BQ13491 265 aa19.03■□□□□ 0.64
COMMD3-210ENST00000472610 PTPROQ16827 1216 aa19.03■□□□□ 0.64
COMMD3-210ENST00000472610 ERMNQ8TAM6 284 aa19.03■□□□□ 0.64
COMMD3-210ENST00000472610 ATXN2LQ8WWM7 1075 aaKnown RBP19.03■□□□□ 0.64
COMMD3-210ENST00000472610 PSPC1Q8WXF1 523 aaKnown RBP19.03■□□□□ 0.64
COMMD3-210ENST00000472610 CCDC43Q96MW1 224 aaKnown RBP19.03■□□□□ 0.64
COMMD3-210ENST00000472610 FDXACB1Q9BRP7 624 aaPredicted RBP19.03■□□□□ 0.64
COMMD3-210ENST00000472610 ATP6V0A4Q9HBG4 840 aa19.03■□□□□ 0.64
COMMD3-210ENST00000472610 CHST12Q9NRB3 414 aa19.03■□□□□ 0.64
COMMD3-210ENST00000472610 TMEM161AQ9NX61 479 aa19.03■□□□□ 0.64
COMMD3-210ENST00000472610 DACT1Q9NYF0 836 aa19.03■□□□□ 0.64
COMMD3-210ENST00000472610 THEGQ9P2T0 379 aa19.03■□□□□ 0.64
COMMD3-210ENST00000472610 COL4A3BPQ9Y5P4 624 aa19.03■□□□□ 0.64
COMMD3-210ENST00000472610 TRANK1O15050 2925 aa19.02■□□□□ 0.64
COMMD3-210ENST00000472610 H3BQV1 296 aa19.02■□□□□ 0.64
COMMD3-210ENST00000472610 ZBTB39O15060 712 aa19.02■□□□□ 0.64
COMMD3-210ENST00000472610 CTNNB1P35222 781 aa19.02■□□□□ 0.64
COMMD3-210ENST00000472610 EMC2Q15006 297 aa19.02■□□□□ 0.64
COMMD3-210ENST00000472610 MCTP1Q6DN14 999 aa19.02■□□□□ 0.64
COMMD3-210ENST00000472610 MTRQ99707 1265 aa19.02■□□□□ 0.64
COMMD3-210ENST00000472610 C11orf84Q9BUA3 381 aaPredicted RBP19.02■□□□□ 0.64
COMMD3-210ENST00000472610 POLR3CQ9BUI4 534 aaPredicted RBP19.02■□□□□ 0.64
COMMD3-210ENST00000472610 PLVAPQ9BX97 442 aa19.02■□□□□ 0.64
COMMD3-210ENST00000472610 PRRC2BQ5JSZ5 2229 aaKnown RBP19.02■□□□□ 0.64
COMMD3-210ENST00000472610 LAD1O00515 517 aa19.01■□□□□ 0.63
COMMD3-210ENST00000472610 HOXA2O43364 376 aa19.01■□□□□ 0.63
COMMD3-210ENST00000472610 DGAT1O75907 488 aa19.01■□□□□ 0.63
COMMD3-210ENST00000472610 LINC00271P0C7V0 271 aa19.01■□□□□ 0.63
COMMD3-210ENST00000472610 SKIV2LQ15477 1246 aaKnown RBP19.01■□□□□ 0.63
COMMD3-210ENST00000472610 NAALADL2Q58DX5 795 aa19.01■□□□□ 0.63
COMMD3-210ENST00000472610 PRPF31Q8WWY3 499 aaKnown RBP19.01■□□□□ 0.63
COMMD3-210ENST00000472610 TMEM143Q96AN5 459 aa19.01■□□□□ 0.63
COMMD3-210ENST00000472610 MRPL38Q96DV4 380 aaKnown RBP19.01■□□□□ 0.63
COMMD3-210ENST00000472610 NLRP4Q96MN2 994 aa19.01■□□□□ 0.63
COMMD3-210ENST00000472610 STK24Q9Y6E0 443 aa19.01■□□□□ 0.63
COMMD3-210ENST00000472610 FNDC1Q4ZHG4 1894 aaPredicted RBP19.01■□□□□ 0.63
COMMD3-210ENST00000472610 EOMESO95936 686 aa19■□□□□ 0.63
COMMD3-210ENST00000472610 SPATA31C1P0DKV0 1188 aa19■□□□□ 0.63
COMMD3-210ENST00000472610 IBSPP21815 317 aaPredicted RBP19■□□□□ 0.63
COMMD3-210ENST00000472610 MUTP22033 750 aa19■□□□□ 0.63
COMMD3-210ENST00000472610 RPA1P27694 616 aa19■□□□□ 0.63
COMMD3-210ENST00000472610 TOB1P50616 345 aaPredicted RBP19■□□□□ 0.63
COMMD3-210ENST00000472610 FXR2P51116 673 aaKnown RBP eCLIP19■□□□□ 0.63
COMMD3-210ENST00000472610 PDIA5Q14554 519 aa19■□□□□ 0.63
COMMD3-210ENST00000472610 MXD4Q14582 209 aaPredicted RBP19■□□□□ 0.63
COMMD3-210ENST00000472610 RILPL1Q5EBL4 403 aa19■□□□□ 0.63
COMMD3-210ENST00000472610 SRGAP1Q7Z6B7 1085 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms