RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 TFDP1Q14186 410 aa15.8■□□□□ 0.12
BRCA1-211ENST00000472490 STK38Q15208 465 aa15.8■□□□□ 0.12
BRCA1-211ENST00000472490 PTPAQ15257 358 aa15.8■□□□□ 0.12
BRCA1-211ENST00000472490 ZRSR1Q15695 479 aaKnown RBP15.8■□□□□ 0.12
BRCA1-211ENST00000472490 HYIQ5T013 277 aa15.8■□□□□ 0.12
BRCA1-211ENST00000472490 FOXD4L5Q5VV16 416 aaPredicted RBP15.8■□□□□ 0.12
BRCA1-211ENST00000472490 CABP7Q86V35 215 aa15.8■□□□□ 0.12
BRCA1-211ENST00000472490 FOXD4L4Q8WXT5 416 aaPredicted RBP15.8■□□□□ 0.12
BRCA1-211ENST00000472490 TMEM143Q96AN5 459 aa15.8■□□□□ 0.12
BRCA1-211ENST00000472490 USP28Q96RU2 1077 aa15.8■□□□□ 0.12
BRCA1-211ENST00000472490 PPP1R16BQ96T49 567 aa15.8■□□□□ 0.12
BRCA1-211ENST00000472490 BHMT2Q9H2M3 363 aa15.8■□□□□ 0.12
BRCA1-211ENST00000472490 ADAMTS10Q9H324 1103 aa15.8■□□□□ 0.12
BRCA1-211ENST00000472490 AGO3Q9H9G7 860 aaKnown RBP15.8■□□□□ 0.12
BRCA1-211ENST00000472490 MSRAQ9UJ68 235 aa15.8■□□□□ 0.12
BRCA1-211ENST00000472490 COL4A3BPQ9Y5P4 624 aa15.8■□□□□ 0.12
BRCA1-211ENST00000472490 USO1O60763 962 aaKnown RBP15.79■□□□□ 0.12
BRCA1-211ENST00000472490 YEATS4O95619 227 aa15.79■□□□□ 0.12
BRCA1-211ENST00000472490 EYA4O95677 639 aa15.79■□□□□ 0.12
BRCA1-211ENST00000472490 DARSP14868 501 aaKnown RBP15.79■□□□□ 0.12
BRCA1-211ENST00000472490 SFPQP23246 707 aaKnown RBP eCLIP15.79■□□□□ 0.12
BRCA1-211ENST00000472490 KRI1Q8N9T8 703 aaKnown RBP15.79■□□□□ 0.12
BRCA1-211ENST00000472490 TMEM40Q8WWA1 233 aa15.79■□□□□ 0.12
BRCA1-211ENST00000472490 PRPF31Q8WWY3 499 aaKnown RBP15.79■□□□□ 0.12
BRCA1-211ENST00000472490 NLRP4Q96MN2 994 aa15.79■□□□□ 0.12
BRCA1-211ENST00000472490 ZBED2Q9BTP6 218 aa15.79■□□□□ 0.12
BRCA1-211ENST00000472490 CDHR5Q9HBB8 845 aa15.79■□□□□ 0.12
BRCA1-211ENST00000472490 BMP2KQ9NSY1 1161 aaPredicted RBP15.79■□□□□ 0.12
BRCA1-211ENST00000472490 TMEM265A0A087WTH1 108 aa15.78■□□□□ 0.12
BRCA1-211ENST00000472490 SOX1O00570 391 aaPredicted RBP15.78■□□□□ 0.12
BRCA1-211ENST00000472490 PPP6R2O75170 966 aa15.78■□□□□ 0.12
BRCA1-211ENST00000472490 CYP11B2P19099 503 aa15.78■□□□□ 0.12
BRCA1-211ENST00000472490 MARCKSP29966 332 aaPredicted RBP15.78■□□□□ 0.12
BRCA1-211ENST00000472490 LAMTOR4Q0VGL1 99 aa15.78■□□□□ 0.12
BRCA1-211ENST00000472490 PCBP1Q15365 356 aaKnown RBP eCLIP15.78■□□□□ 0.12
BRCA1-211ENST00000472490 ECM1Q16610 540 aa15.78■□□□□ 0.12
BRCA1-211ENST00000472490 PADI6Q6TGC4 694 aa15.78■□□□□ 0.12
BRCA1-211ENST00000472490 HERC6Q8IVU3 1022 aa15.78■□□□□ 0.12
BRCA1-211ENST00000472490 MYOCDQ8IZQ8 938 aa15.78■□□□□ 0.12
BRCA1-211ENST00000472490 LINC00301Q8NCQ3 95 aa15.78■□□□□ 0.12
BRCA1-211ENST00000472490 KCNG4Q8TDN1 519 aa15.78■□□□□ 0.12
BRCA1-211ENST00000472490 MMTAG2Q9BU76 263 aaKnown RBP15.78■□□□□ 0.12
BRCA1-211ENST00000472490 OSBPL7Q9BZF2 842 aa15.78■□□□□ 0.12
BRCA1-211ENST00000472490 ERVK-5Q9HDB9 667 aa15.78■□□□□ 0.12
BRCA1-211ENST00000472490 CCDC39Q9UFE4 941 aa15.78■□□□□ 0.12
BRCA1-211ENST00000472490 FBXO2Q9UK22 296 aaPredicted RBP15.78■□□□□ 0.12
BRCA1-211ENST00000472490 ST3GAL5Q9UNP4 418 aa15.78■□□□□ 0.12
BRCA1-211ENST00000472490 NOC2LQ9Y3T9 749 aaKnown RBP15.78■□□□□ 0.12
BRCA1-211ENST00000472490 PCDHA11Q9Y5I1 949 aa15.78■□□□□ 0.12
BRCA1-211ENST00000472490 A0A087WWV3 80 aa15.77■□□□□ 0.12
BRCA1-211ENST00000472490 A0A087WZ62 844 aa15.77■□□□□ 0.12
BRCA1-211ENST00000472490 DENND3A2RUS2 1198 aa15.77■□□□□ 0.12
BRCA1-211ENST00000472490 SPTLC2O15270 562 aa15.77■□□□□ 0.12
BRCA1-211ENST00000472490 TLL1O43897 1013 aa15.77■□□□□ 0.12
BRCA1-211ENST00000472490 BRD1O95696 1058 aa15.77■□□□□ 0.12
BRCA1-211ENST00000472490 ZSCAN20P17040 1043 aaPredicted RBP15.77■□□□□ 0.12
BRCA1-211ENST00000472490 DNAJB2P25686 324 aa15.77■□□□□ 0.12
BRCA1-211ENST00000472490 ARL2P36404 184 aa15.77■□□□□ 0.12
BRCA1-211ENST00000472490 ANP32AP39687 249 aaKnown RBP15.77■□□□□ 0.12
BRCA1-211ENST00000472490 PHKA2P46019 1235 aa15.77■□□□□ 0.12
BRCA1-211ENST00000472490 POU5F1BQ06416 359 aa15.77■□□□□ 0.12
BRCA1-211ENST00000472490 NCBP1Q09161 790 aaKnown RBP15.77■□□□□ 0.12
BRCA1-211ENST00000472490 PKP1Q13835 747 aa15.77■□□□□ 0.12
BRCA1-211ENST00000472490 FAM109BQ6ICB4 259 aaPredicted RBP15.77■□□□□ 0.12
BRCA1-211ENST00000472490 SRGAP1Q7Z6B7 1085 aa15.77■□□□□ 0.12
BRCA1-211ENST00000472490 FAM228AQ86W67 206 aa15.77■□□□□ 0.12
BRCA1-211ENST00000472490 RNF149Q8NC42 400 aa15.77■□□□□ 0.12
BRCA1-211ENST00000472490 TIFAQ96CG3 184 aa15.77■□□□□ 0.12
BRCA1-211ENST00000472490 LRCH3Q96II8 777 aa15.77■□□□□ 0.12
BRCA1-211ENST00000472490 FDXACB1Q9BRP7 624 aaPredicted RBP15.77■□□□□ 0.12
BRCA1-211ENST00000472490 TIPINQ9BVW5 301 aa15.77■□□□□ 0.12
BRCA1-211ENST00000472490 PBX4Q9BYU1 374 aa15.77■□□□□ 0.12
BRCA1-211ENST00000472490 CCSER1Q9C0I3 900 aa15.77■□□□□ 0.12
BRCA1-211ENST00000472490 CSRNP2Q9H175 543 aa15.77■□□□□ 0.12
BRCA1-211ENST00000472490 XPNPEP1Q9NQW7 623 aa15.77■□□□□ 0.12
BRCA1-211ENST00000472490 C1orf112Q9NSG2 853 aa15.77■□□□□ 0.12
BRCA1-211ENST00000472490 KCND2Q9NZV8 630 aa15.77■□□□□ 0.12
BRCA1-211ENST00000472490 TFIP11Q9UBB9 837 aaKnown RBP15.77■□□□□ 0.12
BRCA1-211ENST00000472490 KAT6AQ92794 2004 aa15.77■□□□□ 0.11
BRCA1-211ENST00000472490 MYH9P35579 1960 aaKnown RBP15.76■□□□□ 0.11
BRCA1-211ENST00000472490 GRXCR1A8MXD5 290 aa15.76■□□□□ 0.11
BRCA1-211ENST00000472490 ENPP3O14638 875 aa15.76■□□□□ 0.11
BRCA1-211ENST00000472490 GJB5O95377 273 aa15.76■□□□□ 0.11
BRCA1-211ENST00000472490 SRGAP2CP0DJJ0 459 aa15.76■□□□□ 0.11
BRCA1-211ENST00000472490 NUCB2P80303 420 aa15.76■□□□□ 0.11
BRCA1-211ENST00000472490 DEFB103AP81534 67 aa15.76■□□□□ 0.11
BRCA1-211ENST00000472490 PPP2R5AQ15172 486 aa15.76■□□□□ 0.11
BRCA1-211ENST00000472490 TCTN1Q2MV58 587 aa15.76■□□□□ 0.11
BRCA1-211ENST00000472490 FAM102BQ5T8I3 360 aa15.76■□□□□ 0.11
BRCA1-211ENST00000472490 ZNF697Q5TEC3 545 aa15.76■□□□□ 0.11
BRCA1-211ENST00000472490 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.76■□□□□ 0.11
BRCA1-211ENST00000472490 MAEAQ7L5Y9 396 aa15.76■□□□□ 0.11
BRCA1-211ENST00000472490 KSR1Q8IVT5 923 aa15.76■□□□□ 0.11
BRCA1-211ENST00000472490 KIFAP3Q92845 792 aa15.76■□□□□ 0.11
BRCA1-211ENST00000472490 TOP1MTQ969P6 601 aa15.76■□□□□ 0.11
BRCA1-211ENST00000472490 ZNF668Q96K58 619 aaPredicted RBP15.76■□□□□ 0.11
BRCA1-211ENST00000472490 NFKBIZQ9BYH8 718 aa15.76■□□□□ 0.11
BRCA1-211ENST00000472490 POLR3FQ9H1D9 316 aaPredicted RBP15.76■□□□□ 0.11
BRCA1-211ENST00000472490 TSPYL2Q9H2G4 693 aaPredicted RBP15.76■□□□□ 0.11
BRCA1-211ENST00000472490 SLC28A3Q9HAS3 691 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms