RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 N4BP2L1Q5TBK1 243 aaPredicted RBP11.78□□□□□ -0.52
CDHR3-209ENST00000472116 UNQ6494/PRO21346Q6UXR6 183 aa11.78□□□□□ -0.52
CDHR3-209ENST00000472116 IQCA1Q86XH1 822 aa11.78□□□□□ -0.52
CDHR3-209ENST00000472116 DGKHQ86XP1 1220 aa11.78□□□□□ -0.52
CDHR3-209ENST00000472116 AUTS2Q8WXX7 1259 aa11.78□□□□□ -0.52
CDHR3-209ENST00000472116 CASD1Q96PB1 797 aa11.78□□□□□ -0.52
CDHR3-209ENST00000472116 ZBP1Q9H171 429 aa11.78□□□□□ -0.52
CDHR3-209ENST00000472116 SLC2A4RGQ9NR83 387 aa11.78□□□□□ -0.52
CDHR3-209ENST00000472116 EPS15L1Q9UBC2 864 aa11.78□□□□□ -0.52
CDHR3-209ENST00000472116 DPP7Q9UHL4 492 aa11.78□□□□□ -0.52
CDHR3-209ENST00000472116 NOC2LQ9Y3T9 749 aaKnown RBP11.78□□□□□ -0.52
CDHR3-209ENST00000472116 CEP295Q9C0D2 2601 aa11.78□□□□□ -0.52
CDHR3-209ENST00000472116 GREB1Q4ZG55 1949 aa11.78□□□□□ -0.52
CDHR3-209ENST00000472116 MYH9P35579 1960 aaKnown RBP11.78□□□□□ -0.52
CDHR3-209ENST00000472116 SMARCA5O60264 1052 aaPredicted RBP11.77□□□□□ -0.53
CDHR3-209ENST00000472116 RETP07949 1114 aa11.77□□□□□ -0.53
CDHR3-209ENST00000472116 CTSAP10619 480 aa11.77□□□□□ -0.53
CDHR3-209ENST00000472116 ZSCAN20P17040 1043 aaPredicted RBP11.77□□□□□ -0.53
CDHR3-209ENST00000472116 NRLP54845 237 aa11.77□□□□□ -0.53
CDHR3-209ENST00000472116 MRPS9P82933 396 aaKnown RBP11.77□□□□□ -0.53
CDHR3-209ENST00000472116 PPP2R5DQ14738 602 aa11.77□□□□□ -0.53
CDHR3-209ENST00000472116 CYP26C1Q6V0L0 522 aa11.77□□□□□ -0.53
CDHR3-209ENST00000472116 PRR23CQ6ZRP0 262 aa11.77□□□□□ -0.53
CDHR3-209ENST00000472116 PRR23BQ6ZRT6 265 aa11.77□□□□□ -0.53
CDHR3-209ENST00000472116 LRRC55Q6ZSA7 311 aa11.77□□□□□ -0.53
CDHR3-209ENST00000472116 RNF169Q8NCN4 708 aa11.77□□□□□ -0.53
CDHR3-209ENST00000472116 ESR2Q92731 530 aa11.77□□□□□ -0.53
CDHR3-209ENST00000472116 ZBTB10Q96DT7 871 aa11.77□□□□□ -0.53
CDHR3-209ENST00000472116 CDHR1Q96JP9 859 aa11.77□□□□□ -0.53
CDHR3-209ENST00000472116 ZKSCAN3Q9BRR0 538 aa11.77□□□□□ -0.53
CDHR3-209ENST00000472116 OSBPL6Q9BZF3 934 aa11.77□□□□□ -0.53
CDHR3-209ENST00000472116 RNF41Q9H4P4 317 aaPredicted RBP11.77□□□□□ -0.53
CDHR3-209ENST00000472116 WDR6Q9NNW5 1121 aaKnown RBP11.77□□□□□ -0.53
CDHR3-209ENST00000472116 CLUHO75153 1309 aa11.77□□□□□ -0.53
CDHR3-209ENST00000472116 NT5C1B-RDH14C9J2C7 533 aa11.76□□□□□ -0.53
CDHR3-209ENST00000472116 ZBTB5O15062 677 aa11.76□□□□□ -0.53
CDHR3-209ENST00000472116 BCAR1P56945 870 aa11.76□□□□□ -0.53
CDHR3-209ENST00000472116 FAM189BP81408 668 aa11.76□□□□□ -0.53
CDHR3-209ENST00000472116 PRKCQQ04759 706 aa11.76□□□□□ -0.53
CDHR3-209ENST00000472116 SEMA3FQ13275 785 aa11.76□□□□□ -0.53
CDHR3-209ENST00000472116 CSRP2Q16527 193 aa11.76□□□□□ -0.53
CDHR3-209ENST00000472116 LPAL2Q16609 132 aa11.76□□□□□ -0.53
CDHR3-209ENST00000472116 CELF5Q8N6W0 485 aaKnown RBP11.76□□□□□ -0.53
CDHR3-209ENST00000472116 MYL10Q9BUA6 226 aa11.76□□□□□ -0.53
CDHR3-209ENST00000472116 PIDD1Q9HB75 910 aa11.76□□□□□ -0.53
CDHR3-209ENST00000472116 SEMA4GQ9NTN9 838 aa11.76□□□□□ -0.53
CDHR3-209ENST00000472116 LHX6Q9UPM6 363 aa11.76□□□□□ -0.53
CDHR3-209ENST00000472116 TELO2Q9Y4R8 837 aa11.76□□□□□ -0.53
CDHR3-209ENST00000472116 SPAG17Q6Q759 2223 aa11.76□□□□□ -0.53
CDHR3-209ENST00000472116 GSTTP1A0A1W2PQM5 241 aa11.75□□□□□ -0.53
CDHR3-209ENST00000472116 TMEM8BA6NDV4 472 aa11.75□□□□□ -0.53
CDHR3-209ENST00000472116 FAM170BA6NMN3 283 aa11.75□□□□□ -0.53
CDHR3-209ENST00000472116 ZC3H11AO75152 810 aaKnown RBP eCLIP11.75□□□□□ -0.53
CDHR3-209ENST00000472116 MS4A1P11836 297 aa11.75□□□□□ -0.53
CDHR3-209ENST00000472116 SNW1Q13573 536 aaKnown RBP11.75□□□□□ -0.53
CDHR3-209ENST00000472116 PLCB4Q15147 1175 aa11.75□□□□□ -0.53
CDHR3-209ENST00000472116 ALX1Q15699 326 aa11.75□□□□□ -0.53
CDHR3-209ENST00000472116 MLF2Q15773 248 aaPredicted RBP11.75□□□□□ -0.53
CDHR3-209ENST00000472116 ZBTB41Q5SVQ8 909 aa11.75□□□□□ -0.53
CDHR3-209ENST00000472116 TSHZ3Q63HK5 1081 aa11.75□□□□□ -0.53
CDHR3-209ENST00000472116 TSSK4Q6SA08 328 aa11.75□□□□□ -0.53
CDHR3-209ENST00000472116 DDX53Q86TM3 631 aaKnown RBP11.75□□□□□ -0.53
CDHR3-209ENST00000472116 HOMER1Q86YM7 354 aa11.75□□□□□ -0.53
CDHR3-209ENST00000472116 CMASQ8NFW8 434 aaPredicted RBP11.75□□□□□ -0.53
CDHR3-209ENST00000472116 CUL5Q93034 780 aa11.75□□□□□ -0.53
CDHR3-209ENST00000472116 PHKBQ93100 1093 aa11.75□□□□□ -0.53
CDHR3-209ENST00000472116 CHMP4BQ9H444 224 aaKnown RBP11.75□□□□□ -0.53
CDHR3-209ENST00000472116 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.75□□□□□ -0.53
CDHR3-209ENST00000472116 STK39Q9UEW8 545 aa11.75□□□□□ -0.53
CDHR3-209ENST00000472116 ASPMQ8IZT6 3477 aa11.74□□□□□ -0.53
CDHR3-209ENST00000472116 IGF2RP11717 2491 aa11.74□□□□□ -0.53
CDHR3-209ENST00000472116 CCDC195A0A1B0GUA6 201 aa11.74□□□□□ -0.53
CDHR3-209ENST00000472116 C1QTNF9BB2RNN3 333 aa11.74□□□□□ -0.53
CDHR3-209ENST00000472116 FOXP2O15409 715 aa11.74□□□□□ -0.53
CDHR3-209ENST00000472116 N4BP1O75113 896 aaKnown RBP11.74□□□□□ -0.53
CDHR3-209ENST00000472116 C1QTNF9P0C862 333 aa11.74□□□□□ -0.53
CDHR3-209ENST00000472116 NT5C2P49902 561 aa11.74□□□□□ -0.53
CDHR3-209ENST00000472116 CLCN4P51793 760 aa11.74□□□□□ -0.53
CDHR3-209ENST00000472116 HAND2P61296 217 aa11.74□□□□□ -0.53
CDHR3-209ENST00000472116 PFKPQ01813 784 aa11.74□□□□□ -0.53
CDHR3-209ENST00000472116 AASDHQ4L235 1098 aaPredicted RBP11.74□□□□□ -0.53
CDHR3-209ENST00000472116 VPS53Q5VIR6 699 aa11.74□□□□□ -0.53
CDHR3-209ENST00000472116 PCNX4Q63HM2 1172 aa11.74□□□□□ -0.53
CDHR3-209ENST00000472116 MTHFD1LQ6UB35 978 aa11.74□□□□□ -0.53
CDHR3-209ENST00000472116 LRSAM1Q6UWE0 723 aa11.74□□□□□ -0.53
CDHR3-209ENST00000472116 RSPO2Q6UXX9 243 aaPredicted RBP11.74□□□□□ -0.53
CDHR3-209ENST00000472116 GET4Q7L5D6 327 aaPredicted RBP11.74□□□□□ -0.53
CDHR3-209ENST00000472116 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.74□□□□□ -0.53
CDHR3-209ENST00000472116 SIRT2Q8IXJ6 389 aa11.74□□□□□ -0.53
CDHR3-209ENST00000472116 SMARCC2Q8TAQ2 1214 aa11.74□□□□□ -0.53
CDHR3-209ENST00000472116 PANK1Q8TE04 598 aa11.74□□□□□ -0.53
CDHR3-209ENST00000472116 TRAPPC12Q8WVT3 735 aa11.74□□□□□ -0.53
CDHR3-209ENST00000472116 BBXQ8WY36 941 aaPredicted RBP11.74□□□□□ -0.53
CDHR3-209ENST00000472116 SMG7Q92540 1137 aaKnown RBP11.74□□□□□ -0.53
CDHR3-209ENST00000472116 NELL1Q92832 810 aa11.74□□□□□ -0.53
CDHR3-209ENST00000472116 GPRASP2Q96D09 838 aa11.74□□□□□ -0.53
CDHR3-209ENST00000472116 MYADMQ96S97 322 aa11.74□□□□□ -0.53
CDHR3-209ENST00000472116 NELL2Q99435 816 aa11.74□□□□□ -0.53
CDHR3-209ENST00000472116 MAN1C1Q9NR34 630 aa11.74□□□□□ -0.53
CDHR3-209ENST00000472116 FLNBO75369 2602 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms