RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 SLC26A2P50443 739 aa9.12□□□□□ -0.95
USP48-207ENST00000471752 AFF1P51825 1210 aaKnown RBP9.12□□□□□ -0.95
USP48-207ENST00000471752 AK2P54819 239 aa9.12□□□□□ -0.95
USP48-207ENST00000471752 NR5A1Q13285 461 aa9.12□□□□□ -0.95
USP48-207ENST00000471752 PTPROQ16827 1216 aa9.12□□□□□ -0.95
USP48-207ENST00000471752 MTERF2Q49AM1 385 aa9.12□□□□□ -0.95
USP48-207ENST00000471752 CLLU1OSQ5K130 101 aa9.12□□□□□ -0.95
USP48-207ENST00000471752 KANK3Q6NY19 840 aa9.12□□□□□ -0.95
USP48-207ENST00000471752 ANO5Q75V66 913 aa9.12□□□□□ -0.95
USP48-207ENST00000471752 CMTR2Q8IYT2 770 aaKnown RBP9.12□□□□□ -0.95
USP48-207ENST00000471752 LPPQ93052 612 aa9.12□□□□□ -0.95
USP48-207ENST00000471752 C11orf84Q9BUA3 381 aaPredicted RBP9.12□□□□□ -0.95
USP48-207ENST00000471752 PHF20Q9BVI0 1012 aa9.12□□□□□ -0.95
USP48-207ENST00000471752 SH3GLB2Q9NR46 395 aa9.12□□□□□ -0.95
USP48-207ENST00000471752 BMP2KQ9NSY1 1161 aaPredicted RBP9.12□□□□□ -0.95
USP48-207ENST00000471752 VAV3Q9UKW4 847 aa9.12□□□□□ -0.95
USP48-207ENST00000471752 BARX2Q9UMQ3 279 aaPredicted RBP9.12□□□□□ -0.95
USP48-207ENST00000471752 AKT3Q9Y243 479 aa9.12□□□□□ -0.95
USP48-207ENST00000471752 PCDHB7Q9Y5E2 793 aa9.12□□□□□ -0.95
USP48-207ENST00000471752 COL1A2P08123 1366 aa9.12□□□□□ -0.95
USP48-207ENST00000471752 PIEZO1Q92508 2521 aa9.11□□□□□ -0.95
USP48-207ENST00000471752 ATG2AQ2TAZ0 1938 aa9.11□□□□□ -0.95
USP48-207ENST00000471752 A0A087WZ62 844 aa9.11□□□□□ -0.95
USP48-207ENST00000471752 IGKV6-21A0A0C4DH24 114 aa9.11□□□□□ -0.95
USP48-207ENST00000471752 WDR64B1ANS9 1081 aa9.11□□□□□ -0.95
USP48-207ENST00000471752 NT5C1B-RDH14C9J2C7 533 aa9.11□□□□□ -0.95
USP48-207ENST00000471752 M0QZ92 97 aa9.11□□□□□ -0.95
USP48-207ENST00000471752 MBTPS2O43462 519 aa9.11□□□□□ -0.95
USP48-207ENST00000471752 DEXIO95424 95 aa9.11□□□□□ -0.95
USP48-207ENST00000471752 MMP1P03956 469 aa9.11□□□□□ -0.95
USP48-207ENST00000471752 DARSP14868 501 aaKnown RBP9.11□□□□□ -0.95
USP48-207ENST00000471752 SSTR3P32745 418 aaPredicted RBP9.11□□□□□ -0.95
USP48-207ENST00000471752 GPC3P51654 580 aa9.11□□□□□ -0.95
USP48-207ENST00000471752 SETQ01105 290 aaPredicted RBP9.11□□□□□ -0.95
USP48-207ENST00000471752 ZP2Q05996 745 aa9.11□□□□□ -0.95
USP48-207ENST00000471752 ME3Q16798 604 aa9.11□□□□□ -0.95
USP48-207ENST00000471752 LETM2Q2VYF4 491 aa9.11□□□□□ -0.95
USP48-207ENST00000471752 TIGD5Q53EQ6 642 aa9.11□□□□□ -0.95
USP48-207ENST00000471752 SLC24A5Q71RS6 500 aa9.11□□□□□ -0.95
USP48-207ENST00000471752 MIER3Q7Z3K6 550 aa9.11□□□□□ -0.95
USP48-207ENST00000471752 ZNF598Q86UK7 904 aaKnown RBP9.11□□□□□ -0.95
USP48-207ENST00000471752 TEX2Q8IWB9 1127 aa9.11□□□□□ -0.95
USP48-207ENST00000471752 SMAP1Q8IYB5 467 aaPredicted RBP9.11□□□□□ -0.95
USP48-207ENST00000471752 COLGALT1Q8NBJ5 622 aa9.11□□□□□ -0.95
USP48-207ENST00000471752 RNF169Q8NCN4 708 aa9.11□□□□□ -0.95
USP48-207ENST00000471752 BICD2Q8TD16 824 aa9.11□□□□□ -0.95
USP48-207ENST00000471752 CCDC12Q8WUD4 166 aaPredicted RBP9.11□□□□□ -0.95
USP48-207ENST00000471752 MSLNLQ96KJ4 702 aa9.11□□□□□ -0.95
USP48-207ENST00000471752 RIT2Q99578 217 aa9.11□□□□□ -0.95
USP48-207ENST00000471752 FDXACB1Q9BRP7 624 aaPredicted RBP9.11□□□□□ -0.95
USP48-207ENST00000471752 APOL5Q9BWW9 433 aa9.11□□□□□ -0.95
USP48-207ENST00000471752 TEKT3Q9BXF9 490 aa9.11□□□□□ -0.95
USP48-207ENST00000471752 FTHL17Q9BXU8 183 aa9.11□□□□□ -0.95
USP48-207ENST00000471752 MINDY3Q9H8M7 445 aa9.11□□□□□ -0.95
USP48-207ENST00000471752 NRBP2Q9NSY0 501 aa9.11□□□□□ -0.95
USP48-207ENST00000471752 RGL1Q9NZL6 768 aa9.11□□□□□ -0.95
USP48-207ENST00000471752 LRFN2Q9ULH4 789 aa9.11□□□□□ -0.95
USP48-207ENST00000471752 CPLX1O14810 134 aa9.1□□□□□ -0.95
USP48-207ENST00000471752 GPR182O15218 404 aa9.1□□□□□ -0.95
USP48-207ENST00000471752 FGF18O76093 207 aa9.1□□□□□ -0.95
USP48-207ENST00000471752 STAG3L1P0CL83 205 aa9.1□□□□□ -0.95
USP48-207ENST00000471752 EIF4BP23588 611 aaKnown RBP9.1□□□□□ -0.95
USP48-207ENST00000471752 PIK3AP1Q6ZUJ8 805 aa9.1□□□□□ -0.95
USP48-207ENST00000471752 TMEM173Q86WV6 379 aaPredicted RBP9.1□□□□□ -0.95
USP48-207ENST00000471752 ECHDC2Q86YB7 292 aa9.1□□□□□ -0.95
USP48-207ENST00000471752 DAGLBQ8NCG7 672 aa9.1□□□□□ -0.95
USP48-207ENST00000471752 CCDC148Q8NFR7 591 aa9.1□□□□□ -0.95
USP48-207ENST00000471752 HELQQ8TDG4 1101 aa9.1□□□□□ -0.95
USP48-207ENST00000471752 BCL7CQ8WUZ0 217 aaPredicted RBP9.1□□□□□ -0.95
USP48-207ENST00000471752 AUTS2Q8WXX7 1259 aa9.1□□□□□ -0.95
USP48-207ENST00000471752 TNFRSF25Q93038 417 aa9.1□□□□□ -0.95
USP48-207ENST00000471752 P2RX5Q93086 422 aa9.1□□□□□ -0.95
USP48-207ENST00000471752 TMEM143Q96AN5 459 aa9.1□□□□□ -0.95
USP48-207ENST00000471752 PLVAPQ9BX97 442 aa9.1□□□□□ -0.95
USP48-207ENST00000471752 NIFKQ9BYG3 293 aaKnown RBP9.1□□□□□ -0.95
USP48-207ENST00000471752 KCNMB3Q9NPA1 279 aa9.1□□□□□ -0.95
USP48-207ENST00000471752 SEPT9Q9UHD8 586 aaPredicted RBP9.1□□□□□ -0.95
USP48-207ENST00000471752 DDX25Q9UHL0 483 aaKnown RBP9.1□□□□□ -0.95
USP48-207ENST00000471752 ZFHX2Q9C0A1 2572 aaPredicted RBP9.09□□□□□ -0.95
USP48-207ENST00000471752 FSCN2O14926 492 aa9.09□□□□□ -0.95
USP48-207ENST00000471752 MAGEB2O15479 319 aa9.09□□□□□ -0.95
USP48-207ENST00000471752 MAFO75444 373 aaPredicted RBP9.09□□□□□ -0.95
USP48-207ENST00000471752 SPIRE1Q08AE8 756 aa9.09□□□□□ -0.95
USP48-207ENST00000471752 TBC1D8BQ0IIM8 1120 aa9.09□□□□□ -0.95
USP48-207ENST00000471752 CTTNQ14247 550 aaKnown RBP9.09□□□□□ -0.95
USP48-207ENST00000471752 NONOQ15233 471 aaKnown RBP eCLIP9.09□□□□□ -0.95
USP48-207ENST00000471752 SMAD2Q15796 467 aaKnown RBP9.09□□□□□ -0.95
USP48-207ENST00000471752 XKR3Q5GH77 459 aa9.09□□□□□ -0.95
USP48-207ENST00000471752 TMEM31Q5JXX7 168 aa9.09□□□□□ -0.95
USP48-207ENST00000471752 SPOUT1Q5T280 376 aaKnown RBP9.09□□□□□ -0.95
USP48-207ENST00000471752 LLGL2Q6P1M3 1020 aa9.09□□□□□ -0.95
USP48-207ENST00000471752 TRIM22Q8IYM9 498 aa9.09□□□□□ -0.95
USP48-207ENST00000471752 MICAL1Q8TDZ2 1067 aa9.09□□□□□ -0.95
USP48-207ENST00000471752 NLRP7Q8WX94 980 aa9.09□□□□□ -0.95
USP48-207ENST00000471752 TNPO1Q92973 898 aaKnown RBP9.09□□□□□ -0.95
USP48-207ENST00000471752 DYDC2Q96IM9 177 aa9.09□□□□□ -0.95
USP48-207ENST00000471752 VN1R3Q9BXE9 311 aa9.09□□□□□ -0.95
USP48-207ENST00000471752 LMAN2LQ9H0V9 348 aa9.09□□□□□ -0.95
USP48-207ENST00000471752 ATP6V0A4Q9HBG4 840 aa9.09□□□□□ -0.95
USP48-207ENST00000471752 POLD4Q9HCU8 107 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms