RNA–Protein interactions for RNA: ENST00000471582.5

COL20A1-205, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 1,924 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-205ENST00000471582 VWA5AO00534 786 aa20.33■□□□□ 0.84
COL20A1-205ENST00000471582 RARRES1P49788 294 aa20.33■□□□□ 0.84
COL20A1-205ENST00000471582 BACE1P56817 501 aa20.33■□□□□ 0.84
COL20A1-205ENST00000471582 SMC1AQ14683 1233 aaKnown RBP20.33■□□□□ 0.84
COL20A1-205ENST00000471582 MMGT1Q8N4V1 131 aa20.33■□□□□ 0.84
COL20A1-205ENST00000471582 ANKRD13CQ8N6S4 541 aa20.33■□□□□ 0.84
COL20A1-205ENST00000471582 TAAR1Q96RJ0 339 aa20.33■□□□□ 0.84
COL20A1-205ENST00000471582 TLR10Q9BXR5 811 aa20.33■□□□□ 0.84
COL20A1-205ENST00000471582 TMEM206Q9H813 350 aa20.33■□□□□ 0.84
COL20A1-205ENST00000471582 RNF14Q9UBS8 474 aa20.33■□□□□ 0.84
COL20A1-205ENST00000471582 MYH10P35580 1976 aa20.32■□□□□ 0.84
COL20A1-205ENST00000471582 PTPRAP18433 802 aa20.32■□□□□ 0.84
COL20A1-205ENST00000471582 FMO5P49326 533 aa20.32■□□□□ 0.84
COL20A1-205ENST00000471582 JAK3P52333 1124 aa20.32■□□□□ 0.84
COL20A1-205ENST00000471582 KIAA0753Q2KHM9 967 aa20.32■□□□□ 0.84
COL20A1-205ENST00000471582 MAP9Q49MG5 647 aa20.32■□□□□ 0.84
COL20A1-205ENST00000471582 PRAMEF18Q5VWM3 479 aa20.32■□□□□ 0.84
COL20A1-205ENST00000471582 RNF207Q6ZRF8 634 aa20.32■□□□□ 0.84
COL20A1-205ENST00000471582 ZNF571Q7Z3V5 609 aaPredicted RBP20.32■□□□□ 0.84
COL20A1-205ENST00000471582 FMNL3Q8IVF7 1028 aa20.32■□□□□ 0.84
COL20A1-205ENST00000471582 RBM46Q8TBY0 533 aaKnown RBP20.32■□□□□ 0.84
COL20A1-205ENST00000471582 ZKSCAN4Q969J2 545 aaPredicted RBP20.32■□□□□ 0.84
COL20A1-205ENST00000471582 DRC1Q96MC2 740 aa20.32■□□□□ 0.84
COL20A1-205ENST00000471582 TRERF1Q96PN7 1200 aa20.32■□□□□ 0.84
COL20A1-205ENST00000471582 PDCD2LQ9BRP1 358 aa20.32■□□□□ 0.84
COL20A1-205ENST00000471582 PXMP2Q9NR77 195 aa20.32■□□□□ 0.84
COL20A1-205ENST00000471582 PKD2L1Q9P0L9 805 aa20.32■□□□□ 0.84
COL20A1-205ENST00000471582 GRIN3BO60391 1043 aa20.31■□□□□ 0.84
COL20A1-205ENST00000471582 GFPT2O94808 682 aa20.31■□□□□ 0.84
COL20A1-205ENST00000471582 EIF2AK2P19525 551 aaKnown RBP20.31■□□□□ 0.84
COL20A1-205ENST00000471582 SFNP31947 248 aa20.31■□□□□ 0.84
COL20A1-205ENST00000471582 OAZ1P54368 228 aa20.31■□□□□ 0.84
COL20A1-205ENST00000471582 DGKZQ13574 1117 aa20.31■□□□□ 0.84
COL20A1-205ENST00000471582 COG2Q14746 738 aa20.31■□□□□ 0.84
COL20A1-205ENST00000471582 CCDC70Q6NSX1 233 aa20.31■□□□□ 0.84
COL20A1-205ENST00000471582 VPS36Q86VN1 386 aa20.31■□□□□ 0.84
COL20A1-205ENST00000471582 C12orf56Q8IXR9 622 aa20.31■□□□□ 0.84
COL20A1-205ENST00000471582 C4orf19Q8IY42 314 aa20.31■□□□□ 0.84
COL20A1-205ENST00000471582 COG1Q8WTW3 980 aa20.31■□□□□ 0.84
COL20A1-205ENST00000471582 L3MBTL3Q96JM7 780 aaPredicted RBP20.31■□□□□ 0.84
COL20A1-205ENST00000471582 RMDN3Q96TC7 470 aa20.31■□□□□ 0.84
COL20A1-205ENST00000471582 IKZF4Q9H2S9 585 aa20.31■□□□□ 0.84
COL20A1-205ENST00000471582 ST6GALNAC4Q9H4F1 302 aa20.31■□□□□ 0.84
COL20A1-205ENST00000471582 ST7Q9NRC1 585 aa20.31■□□□□ 0.84
COL20A1-205ENST00000471582 K7ENM7 598 aa20.31■□□□□ 0.84
COL20A1-205ENST00000471582 BUB1O43683 1085 aa20.31■□□□□ 0.84
COL20A1-205ENST00000471582 EIF3JO75822 258 aaKnown RBP20.31■□□□□ 0.84
COL20A1-205ENST00000471582 PLS3P13797 630 aa20.31■□□□□ 0.84
COL20A1-205ENST00000471582 FERP16591 822 aa20.31■□□□□ 0.84
COL20A1-205ENST00000471582 KLRC1P26715 233 aa20.31■□□□□ 0.84
COL20A1-205ENST00000471582 KRT76Q01546 638 aa20.31■□□□□ 0.84
COL20A1-205ENST00000471582 GPS2Q13227 327 aa20.31■□□□□ 0.84
COL20A1-205ENST00000471582 NFRKBQ6P4R8 1299 aa20.31■□□□□ 0.84
COL20A1-205ENST00000471582 KSR1Q8IVT5 923 aa20.31■□□□□ 0.84
COL20A1-205ENST00000471582 SYCP3Q8IZU3 236 aa20.31■□□□□ 0.84
COL20A1-205ENST00000471582 RDM1Q8NG50 284 aa20.31■□□□□ 0.84
COL20A1-205ENST00000471582 KLRG1Q96E93 195 aa20.31■□□□□ 0.84
COL20A1-205ENST00000471582 C12orf42Q96LP6 360 aa20.31■□□□□ 0.84
COL20A1-205ENST00000471582 NENFQ9UMX5 172 aa20.31■□□□□ 0.84
COL20A1-205ENST00000471582 SAMM50Q9Y512 469 aa20.31■□□□□ 0.84
COL20A1-205ENST00000471582 POLR2AP24928 1970 aaKnown RBP20.3■□□□□ 0.84
COL20A1-205ENST00000471582 WDR64B1ANS9 1081 aa20.3■□□□□ 0.84
COL20A1-205ENST00000471582 C19orf81C9J6K1 198 aa20.3■□□□□ 0.84
COL20A1-205ENST00000471582 CYP2J2P51589 502 aa20.3■□□□□ 0.84
COL20A1-205ENST00000471582 NAP1L1P55209 391 aaKnown RBP20.3■□□□□ 0.84
COL20A1-205ENST00000471582 SNRPFP62306 86 aaKnown RBP20.3■□□□□ 0.84
COL20A1-205ENST00000471582 SLC17A8Q8NDX2 589 aa20.3■□□□□ 0.84
COL20A1-205ENST00000471582 NAGPAQ9UK23 515 aa20.3■□□□□ 0.84
COL20A1-205ENST00000471582 RFX1P22670 979 aa20.29■□□□□ 0.84
COL20A1-205ENST00000471582 YWHABP31946 246 aaKnown RBP20.29■□□□□ 0.84
COL20A1-205ENST00000471582 STAT1P42224 750 aa20.29■□□□□ 0.84
COL20A1-205ENST00000471582 PAFAH1B1P43034 410 aa20.29■□□□□ 0.84
COL20A1-205ENST00000471582 PSMC5P62195 406 aa20.29■□□□□ 0.84
COL20A1-205ENST00000471582 BFSP1Q12934 665 aa20.29■□□□□ 0.84
COL20A1-205ENST00000471582 SPATA4Q8NEY3 305 aa20.29■□□□□ 0.84
COL20A1-205ENST00000471582 PHIPQ8WWQ0 1821 aa20.29■□□□□ 0.84
COL20A1-205ENST00000471582 EXOC3O60645 756 aa20.29■□□□□ 0.84
COL20A1-205ENST00000471582 PALMO75781 387 aa20.29■□□□□ 0.84
COL20A1-205ENST00000471582 IFI16Q16666 785 aaKnown RBP20.29■□□□□ 0.84
COL20A1-205ENST00000471582 NOL9Q5SY16 702 aaKnown RBP20.29■□□□□ 0.84
COL20A1-205ENST00000471582 CCDC181Q5TID7 509 aa20.29■□□□□ 0.84
COL20A1-205ENST00000471582 ARHGEF16Q5VV41 709 aa20.29■□□□□ 0.84
COL20A1-205ENST00000471582 ATG4CQ96DT6 458 aa20.29■□□□□ 0.84
COL20A1-205ENST00000471582 ACCSQ96QU6 501 aa20.29■□□□□ 0.84
COL20A1-205ENST00000471582 STK33Q9BYT3 514 aa20.29■□□□□ 0.84
COL20A1-205ENST00000471582 MAF1Q9H063 256 aa20.29■□□□□ 0.84
COL20A1-205ENST00000471582 RNF146Q9NTX7 359 aa20.29■□□□□ 0.84
COL20A1-205ENST00000471582 ANKEF1Q9NU02 776 aa20.29■□□□□ 0.84
COL20A1-205ENST00000471582 TCEAL9Q9UHQ7 104 aa20.29■□□□□ 0.84
COL20A1-205ENST00000471582 AJAP1Q9UKB5 411 aaPredicted RBP20.29■□□□□ 0.84
COL20A1-205ENST00000471582 INTUQ9ULD6 942 aa20.29■□□□□ 0.84
COL20A1-205ENST00000471582 MAFGO15525 162 aa20.28■□□□□ 0.84
COL20A1-205ENST00000471582 OAS2P29728 719 aaKnown RBP20.28■□□□□ 0.84
COL20A1-205ENST00000471582 C2orf54Q08AI8 447 aa20.28■□□□□ 0.84
COL20A1-205ENST00000471582 CASP8Q14790 479 aa20.28■□□□□ 0.84
COL20A1-205ENST00000471582 ENOX2Q16206 610 aaKnown RBP20.28■□□□□ 0.84
COL20A1-205ENST00000471582 MEI1Q5TIA1 1274 aa20.28■□□□□ 0.84
COL20A1-205ENST00000471582 ALKBH5Q6P6C2 394 aaKnown RBP20.28■□□□□ 0.84
COL20A1-205ENST00000471582 INTS8Q75QN2 995 aaKnown RBP20.28■□□□□ 0.84
COL20A1-205ENST00000471582 REPS2Q8NFH8 660 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms