RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 DARSP14868 501 aaKnown RBP17.01■□□□□ 0.31
SDC3-203ENST00000471567 UBA7P41226 1012 aa17.01■□□□□ 0.31
SDC3-203ENST00000471567 CEBPZQ03701 1054 aaKnown RBP17.01■□□□□ 0.31
SDC3-203ENST00000471567 PKP1Q13835 747 aa17.01■□□□□ 0.31
SDC3-203ENST00000471567 MXD4Q14582 209 aaPredicted RBP17.01■□□□□ 0.31
SDC3-203ENST00000471567 RAB30Q15771 203 aa17.01■□□□□ 0.31
SDC3-203ENST00000471567 FOXD4L5Q5VV16 416 aaPredicted RBP17.01■□□□□ 0.31
SDC3-203ENST00000471567 FAM109BQ6ICB4 259 aaPredicted RBP17.01■□□□□ 0.31
SDC3-203ENST00000471567 RHPN2Q8IUC4 686 aa17.01■□□□□ 0.31
SDC3-203ENST00000471567 MCPH1Q8NEM0 835 aa17.01■□□□□ 0.31
SDC3-203ENST00000471567 PRPF31Q8WWY3 499 aaKnown RBP17.01■□□□□ 0.31
SDC3-203ENST00000471567 FOXD4L4Q8WXT5 416 aaPredicted RBP17.01■□□□□ 0.31
SDC3-203ENST00000471567 SCLT1Q96NL6 688 aa17.01■□□□□ 0.31
SDC3-203ENST00000471567 GCOM2Q9BZD3 368 aaPredicted RBP17.01■□□□□ 0.31
SDC3-203ENST00000471567 INO80BQ9C086 356 aaPredicted RBP17.01■□□□□ 0.31
SDC3-203ENST00000471567 ERVK-5Q9HDB9 667 aa17.01■□□□□ 0.31
SDC3-203ENST00000471567 FBXO2Q9UK22 296 aaPredicted RBP17.01■□□□□ 0.31
SDC3-203ENST00000471567 COL4A3BPQ9Y5P4 624 aa17.01■□□□□ 0.31
SDC3-203ENST00000471567 ARID2Q68CP9 1835 aa17■□□□□ 0.31
SDC3-203ENST00000471567 GRXCR1A8MXD5 290 aa17■□□□□ 0.31
SDC3-203ENST00000471567 ENPP3O14638 875 aa17■□□□□ 0.31
SDC3-203ENST00000471567 USO1O60763 962 aaKnown RBP17■□□□□ 0.31
SDC3-203ENST00000471567 EYA4O95677 639 aa17■□□□□ 0.31
SDC3-203ENST00000471567 BRD1O95696 1058 aa17■□□□□ 0.31
SDC3-203ENST00000471567 CYP11B2P19099 503 aa17■□□□□ 0.31
SDC3-203ENST00000471567 MARCKSP29966 332 aaPredicted RBP17■□□□□ 0.31
SDC3-203ENST00000471567 DEFB103AP81534 67 aa17■□□□□ 0.31
SDC3-203ENST00000471567 POU5F1BQ06416 359 aa17■□□□□ 0.31
SDC3-203ENST00000471567 LAMTOR4Q0VGL1 99 aa17■□□□□ 0.31
SDC3-203ENST00000471567 NFX1Q12986 1120 aaKnown RBP17■□□□□ 0.31
SDC3-203ENST00000471567 PADI6Q6TGC4 694 aa17■□□□□ 0.31
SDC3-203ENST00000471567 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17■□□□□ 0.31
SDC3-203ENST00000471567 CABP7Q86V35 215 aa17■□□□□ 0.31
SDC3-203ENST00000471567 HERC6Q8IVU3 1022 aa17■□□□□ 0.31
SDC3-203ENST00000471567 LINC00301Q8NCQ3 95 aa17■□□□□ 0.31
SDC3-203ENST00000471567 CDK5RAP3Q96JB5 506 aa17■□□□□ 0.31
SDC3-203ENST00000471567 BHMT2Q9H2M3 363 aa17■□□□□ 0.31
SDC3-203ENST00000471567 BMP2KQ9NSY1 1161 aaPredicted RBP17■□□□□ 0.31
SDC3-203ENST00000471567 MSRAQ9UJ68 235 aa17■□□□□ 0.31
SDC3-203ENST00000471567 ST3GAL5Q9UNP4 418 aa17■□□□□ 0.31
SDC3-203ENST00000471567 PCDHA11Q9Y5I1 949 aa17■□□□□ 0.31
SDC3-203ENST00000471567 TMEM265A0A087WTH1 108 aa16.99■□□□□ 0.31
SDC3-203ENST00000471567 A0A087WZ62 844 aa16.99■□□□□ 0.31
SDC3-203ENST00000471567 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.99■□□□□ 0.31
SDC3-203ENST00000471567 YEATS4O95619 227 aa16.99■□□□□ 0.31
SDC3-203ENST00000471567 ARL2P36404 184 aa16.99■□□□□ 0.31
SDC3-203ENST00000471567 GRIN1Q05586 938 aa16.99■□□□□ 0.31
SDC3-203ENST00000471567 GRB10Q13322 594 aa16.99■□□□□ 0.31
SDC3-203ENST00000471567 STK38Q15208 465 aa16.99■□□□□ 0.31
SDC3-203ENST00000471567 FAM228AQ86W67 206 aa16.99■□□□□ 0.31
SDC3-203ENST00000471567 KRI1Q8N9T8 703 aaKnown RBP16.99■□□□□ 0.31
SDC3-203ENST00000471567 CALML4Q96GE6 196 aa16.99■□□□□ 0.31
SDC3-203ENST00000471567 PNMA5Q96PV4 448 aa16.99■□□□□ 0.31
SDC3-203ENST00000471567 FDXACB1Q9BRP7 624 aaPredicted RBP16.99■□□□□ 0.31
SDC3-203ENST00000471567 PBX4Q9BYU1 374 aa16.99■□□□□ 0.31
SDC3-203ENST00000471567 CCSER1Q9C0I3 900 aa16.99■□□□□ 0.31
SDC3-203ENST00000471567 TSPYL2Q9H2G4 693 aaPredicted RBP16.99■□□□□ 0.31
SDC3-203ENST00000471567 TFIP11Q9UBB9 837 aaKnown RBP16.99■□□□□ 0.31
SDC3-203ENST00000471567 MICAL3Q7RTP6 2002 aa16.99■□□□□ 0.31
SDC3-203ENST00000471567 LOXHD1Q8IVV2 1947 aa16.98■□□□□ 0.31
SDC3-203ENST00000471567 E9PMD0 336 aa16.98■□□□□ 0.31
SDC3-203ENST00000471567 PPP6R2O75170 966 aa16.98■□□□□ 0.31
SDC3-203ENST00000471567 GJB5O95377 273 aa16.98■□□□□ 0.31
SDC3-203ENST00000471567 DNAJB2P25686 324 aa16.98■□□□□ 0.31
SDC3-203ENST00000471567 TFDP1Q14186 410 aa16.98■□□□□ 0.31
SDC3-203ENST00000471567 ZRSR1Q15695 479 aaKnown RBP16.98■□□□□ 0.31
SDC3-203ENST00000471567 TMEM119Q4V9L6 283 aa16.98■□□□□ 0.31
SDC3-203ENST00000471567 SRGAP1Q7Z6B7 1085 aa16.98■□□□□ 0.31
SDC3-203ENST00000471567 RTN4RL1Q86UN2 441 aaPredicted RBP16.98■□□□□ 0.31
SDC3-203ENST00000471567 KSR1Q8IVT5 923 aa16.98■□□□□ 0.31
SDC3-203ENST00000471567 TOP1MTQ969P6 601 aa16.98■□□□□ 0.31
SDC3-203ENST00000471567 ZNF668Q96K58 619 aaPredicted RBP16.98■□□□□ 0.31
SDC3-203ENST00000471567 NLRP4Q96MN2 994 aa16.98■□□□□ 0.31
SDC3-203ENST00000471567 CSRNP2Q9H175 543 aa16.98■□□□□ 0.31
SDC3-203ENST00000471567 TMX1Q9H3N1 280 aa16.98■□□□□ 0.31
SDC3-203ENST00000471567 IFT122Q9HBG6 1241 aa16.98■□□□□ 0.31
SDC3-203ENST00000471567 CFAP45Q9UL16 551 aa16.98■□□□□ 0.31
SDC3-203ENST00000471567 ZDHHC9Q9Y397 364 aa16.98■□□□□ 0.31
SDC3-203ENST00000471567 SPTLC2O15270 562 aa16.97■□□□□ 0.31
SDC3-203ENST00000471567 SRGAP2CP0DJJ0 459 aa16.97■□□□□ 0.31
SDC3-203ENST00000471567 SFPQP23246 707 aaKnown RBP eCLIP16.97■□□□□ 0.31
SDC3-203ENST00000471567 RABGGTBP53611 331 aa16.97■□□□□ 0.31
SDC3-203ENST00000471567 KCNK18Q7Z418 384 aa16.97■□□□□ 0.31
SDC3-203ENST00000471567 IFNLR1Q8IU57 520 aaPredicted RBP16.97■□□□□ 0.31
SDC3-203ENST00000471567 MYOCDQ8IZQ8 938 aa16.97■□□□□ 0.31
SDC3-203ENST00000471567 RNF149Q8NC42 400 aa16.97■□□□□ 0.31
SDC3-203ENST00000471567 LINC01599Q8WXQ3 324 aa16.97■□□□□ 0.31
SDC3-203ENST00000471567 TIFAQ96CG3 184 aa16.97■□□□□ 0.31
SDC3-203ENST00000471567 RAD9AQ99638 391 aa16.97■□□□□ 0.31
SDC3-203ENST00000471567 ZBED2Q9BTP6 218 aa16.97■□□□□ 0.31
SDC3-203ENST00000471567 POLR3FQ9H1D9 316 aaPredicted RBP16.97■□□□□ 0.31
SDC3-203ENST00000471567 C1orf112Q9NSG2 853 aa16.97■□□□□ 0.31
SDC3-203ENST00000471567 RNF216Q9NWF9 866 aaPredicted RBP16.97■□□□□ 0.31
SDC3-203ENST00000471567 RBAK-RBAKDNI3L0D1 243 aa16.96■□□□□ 0.31
SDC3-203ENST00000471567 TLL1O43897 1013 aa16.96■□□□□ 0.31
SDC3-203ENST00000471567 GLRA2P23416 452 aa16.96■□□□□ 0.31
SDC3-203ENST00000471567 PBX2P40425 430 aa16.96■□□□□ 0.31
SDC3-203ENST00000471567 PHKA2P46019 1235 aa16.96■□□□□ 0.31
SDC3-203ENST00000471567 PTENP60484 403 aa16.96■□□□□ 0.31
SDC3-203ENST00000471567 DSC3Q14574 896 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms