RNA–Protein interactions for RNA: ENST00000471496.5

LINC00888-202, long intergenic non-protein coding RNA 888, humanhuman

TSL 3 BASIC

Gene LINC00888, Length 1,490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-202ENST00000471496 MTMR6Q9Y217 621 aa13.87□□□□□ -0.19
LINC00888-202ENST00000471496 VPS37CA5D8V6 355 aaPredicted RBP13.87□□□□□ -0.19
LINC00888-202ENST00000471496 DDX11L8A8MPP1 907 aa13.87□□□□□ -0.19
LINC00888-202ENST00000471496 MAGEB2O15479 319 aa13.87□□□□□ -0.19
LINC00888-202ENST00000471496 RPLP2P05387 115 aaKnown RBP13.87□□□□□ -0.19
LINC00888-202ENST00000471496 CLCN3P51790 818 aa13.87□□□□□ -0.19
LINC00888-202ENST00000471496 NPEPPSP55786 919 aa13.87□□□□□ -0.19
LINC00888-202ENST00000471496 SMAD3P84022 425 aaKnown RBP13.87□□□□□ -0.19
LINC00888-202ENST00000471496 RESTQ13127 1097 aa13.87□□□□□ -0.19
LINC00888-202ENST00000471496 DRP2Q13474 957 aa13.87□□□□□ -0.19
LINC00888-202ENST00000471496 MTERF2Q49AM1 385 aa13.87□□□□□ -0.19
LINC00888-202ENST00000471496 FBXO47Q5MNV8 452 aa13.87□□□□□ -0.19
LINC00888-202ENST00000471496 EFCAB12Q6NXP0 572 aa13.87□□□□□ -0.19
LINC00888-202ENST00000471496 LRRC71Q8N4P6 559 aa13.87□□□□□ -0.19
LINC00888-202ENST00000471496 CELF4Q9BZC1 486 aaKnown RBP13.87□□□□□ -0.19
LINC00888-202ENST00000471496 ZSWIM4Q9H7M6 989 aa13.87□□□□□ -0.19
LINC00888-202ENST00000471496 AGO3Q9H9G7 860 aaKnown RBP13.87□□□□□ -0.19
LINC00888-202ENST00000471496 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.86□□□□□ -0.19
LINC00888-202ENST00000471496 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.86□□□□□ -0.19
LINC00888-202ENST00000471496 MED24O75448 989 aa13.86□□□□□ -0.19
LINC00888-202ENST00000471496 BAIAP3O94812 1187 aa13.86□□□□□ -0.19
LINC00888-202ENST00000471496 GHRP10912 638 aa13.86□□□□□ -0.19
LINC00888-202ENST00000471496 ACTN1P12814 892 aa13.86□□□□□ -0.19
LINC00888-202ENST00000471496 PRPHP41219 470 aa13.86□□□□□ -0.19
LINC00888-202ENST00000471496 ATP2C1P98194 919 aaPredicted RBP13.86□□□□□ -0.19
LINC00888-202ENST00000471496 IER5Q5VY09 327 aa13.86□□□□□ -0.19
LINC00888-202ENST00000471496 BRAPQ7Z569 592 aa13.86□□□□□ -0.19
LINC00888-202ENST00000471496 TPH2Q8IWU9 490 aa13.86□□□□□ -0.19
LINC00888-202ENST00000471496 IGSF22Q8N9C0 903 aa13.86□□□□□ -0.19
LINC00888-202ENST00000471496 NEK9Q8TD19 979 aa13.86□□□□□ -0.19
LINC00888-202ENST00000471496 TMEM40Q8WWA1 233 aa13.86□□□□□ -0.19
LINC00888-202ENST00000471496 CYP26B1Q9NR63 512 aa13.86□□□□□ -0.19
LINC00888-202ENST00000471496 TRPV2Q9Y5S1 764 aa13.86□□□□□ -0.19
LINC00888-202ENST00000471496 ABHD14A-ACY1A0A1B0GW23 586 aa13.85□□□□□ -0.19
LINC00888-202ENST00000471496 LAD1O00515 517 aa13.85□□□□□ -0.19
LINC00888-202ENST00000471496 DKC1O60832 514 aaKnown RBP eCLIP13.85□□□□□ -0.195e-72■■■■■ 63.1
LINC00888-202ENST00000471496 GPR32O75388 356 aa13.85□□□□□ -0.19
LINC00888-202ENST00000471496 MAFO75444 373 aaPredicted RBP13.85□□□□□ -0.19
LINC00888-202ENST00000471496 VTNP04004 478 aa13.85□□□□□ -0.19
LINC00888-202ENST00000471496 YWHABP31946 246 aaKnown RBP13.85□□□□□ -0.19
LINC00888-202ENST00000471496 WDR5P61964 334 aaKnown RBP13.85□□□□□ -0.19
LINC00888-202ENST00000471496 DEFB103AP81534 67 aa13.85□□□□□ -0.19
LINC00888-202ENST00000471496 TBC1D8BQ0IIM8 1120 aa13.85□□□□□ -0.19
LINC00888-202ENST00000471496 CATSPER3Q86XQ3 398 aa13.85□□□□□ -0.19
LINC00888-202ENST00000471496 METTL13Q8N6R0 699 aa13.85□□□□□ -0.19
LINC00888-202ENST00000471496 POLR3CQ9BUI4 534 aaPredicted RBP13.85□□□□□ -0.19
LINC00888-202ENST00000471496 IFIH1Q9BYX4 1025 aaKnown RBP13.85□□□□□ -0.19
LINC00888-202ENST00000471496 MTIF3Q9H2K0 278 aaKnown RBP13.85□□□□□ -0.19
LINC00888-202ENST00000471496 ADAMTS10Q9H324 1103 aa13.85□□□□□ -0.19
LINC00888-202ENST00000471496 DHX33Q9H6R0 707 aaKnown RBP13.85□□□□□ -0.19
LINC00888-202ENST00000471496 SLC4A7Q9Y6M7 1214 aa13.85□□□□□ -0.19
LINC00888-202ENST00000471496 SQORQ9Y6N5 450 aa13.85□□□□□ -0.19
LINC00888-202ENST00000471496 A0A087WWV3 80 aa13.84□□□□□ -0.19
LINC00888-202ENST00000471496 ZBBXA8MT70 800 aa13.84□□□□□ -0.19
LINC00888-202ENST00000471496 STX6O43752 255 aa13.84□□□□□ -0.19
LINC00888-202ENST00000471496 RPA1P27694 616 aa13.84□□□□□ -0.19
LINC00888-202ENST00000471496 IKBKEQ14164 716 aa13.84□□□□□ -0.19
LINC00888-202ENST00000471496 PDIA5Q14554 519 aa13.84□□□□□ -0.19
LINC00888-202ENST00000471496 ECM1Q16610 540 aa13.84□□□□□ -0.19
LINC00888-202ENST00000471496 FAM173BQ6P4H8 233 aa13.84□□□□□ -0.19
LINC00888-202ENST00000471496 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.84□□□□□ -0.19
LINC00888-202ENST00000471496 TSHZ1Q6ZSZ6 1077 aa13.84□□□□□ -0.19
LINC00888-202ENST00000471496 SEPT8Q92599 483 aa13.84□□□□□ -0.19
LINC00888-202ENST00000471496 PBX4Q9BYU1 374 aa13.84□□□□□ -0.19
LINC00888-202ENST00000471496 SUGCTQ9HAC7 445 aa13.84□□□□□ -0.19
LINC00888-202ENST00000471496 TUFT1Q9NNX1 390 aa13.84□□□□□ -0.19
LINC00888-202ENST00000471496 CDH23Q9H251 3354 aa13.84□□□□□ -0.19
LINC00888-202ENST00000471496 TTC3P53804 2025 aa13.84□□□□□ -0.19
LINC00888-202ENST00000471496 TRANK1O15050 2925 aa13.83□□□□□ -0.2
LINC00888-202ENST00000471496 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.83□□□□□ -0.2
LINC00888-202ENST00000471496 PP2D1A8MPX8 630 aa13.83□□□□□ -0.2
LINC00888-202ENST00000471496 ATP2A2P16615 1042 aaKnown RBP13.83□□□□□ -0.2
LINC00888-202ENST00000471496 CD52P31358 61 aa13.83□□□□□ -0.2
LINC00888-202ENST00000471496 KIZQ2M2Z5 673 aa13.83□□□□□ -0.2
LINC00888-202ENST00000471496 TMCO2Q7Z6W1 182 aaPredicted RBP13.83□□□□□ -0.2
LINC00888-202ENST00000471496 PHOSPHO2Q8TCD6 241 aa13.83□□□□□ -0.2
LINC00888-202ENST00000471496 CEP170P1Q96L14 293 aa13.83□□□□□ -0.2
LINC00888-202ENST00000471496 PPP1R16BQ96T49 567 aa13.83□□□□□ -0.2
LINC00888-202ENST00000471496 SLC9A7Q96T83 725 aa13.83□□□□□ -0.2
LINC00888-202ENST00000471496 MMTAG2Q9BU76 263 aaKnown RBP13.83□□□□□ -0.2
LINC00888-202ENST00000471496 ANKEF1Q9NU02 776 aa13.83□□□□□ -0.2
LINC00888-202ENST00000471496 PPME1Q9Y570 386 aa13.83□□□□□ -0.2
LINC00888-202ENST00000471496 M0QZ92 97 aa13.82□□□□□ -0.2
LINC00888-202ENST00000471496 DNAJB2P25686 324 aa13.82□□□□□ -0.2
LINC00888-202ENST00000471496 TMOD1P28289 359 aa13.82□□□□□ -0.2
LINC00888-202ENST00000471496 CDC25AP30304 524 aa13.82□□□□□ -0.2
LINC00888-202ENST00000471496 RARRES1P49788 294 aa13.82□□□□□ -0.2
LINC00888-202ENST00000471496 GPC3P51654 580 aa13.82□□□□□ -0.2
LINC00888-202ENST00000471496 RABGGTBP53611 331 aa13.82□□□□□ -0.2
LINC00888-202ENST00000471496 CRYBB1P53674 252 aaPredicted RBP13.82□□□□□ -0.2
LINC00888-202ENST00000471496 NLRP11P59045 1033 aaKnown RBP13.82□□□□□ -0.2
LINC00888-202ENST00000471496 PTPAQ15257 358 aa13.82□□□□□ -0.2
LINC00888-202ENST00000471496 TMEM266Q2M3C6 531 aa13.82□□□□□ -0.2
LINC00888-202ENST00000471496 XKR9Q5GH70 373 aa13.82□□□□□ -0.2
LINC00888-202ENST00000471496 DTHD1Q6ZMT9 781 aa13.82□□□□□ -0.2
LINC00888-202ENST00000471496 OTUD6AQ7L8S5 288 aa13.82□□□□□ -0.2
LINC00888-202ENST00000471496 RTN4RL1Q86UN2 441 aaPredicted RBP13.82□□□□□ -0.2
LINC00888-202ENST00000471496 USP38Q8NB14 1042 aa13.82□□□□□ -0.2
LINC00888-202ENST00000471496 PIGOQ8TEQ8 1089 aa13.82□□□□□ -0.2
LINC00888-202ENST00000471496 LINC01599Q8WXQ3 324 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms