RNA–Protein interactions for RNA: ENST00000471423.1

VPS72-204, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 2

Gene VPS72, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-204ENST00000471423 GRB10Q13322 594 aa19.73■□□□□ 0.75
VPS72-204ENST00000471423 HYIQ5T013 277 aa19.73■□□□□ 0.75
VPS72-204ENST00000471423 KCNK18Q7Z418 384 aa19.73■□□□□ 0.75
VPS72-204ENST00000471423 KSR1Q8IVT5 923 aa19.73■□□□□ 0.75
VPS72-204ENST00000471423 LINC00301Q8NCQ3 95 aa19.73■□□□□ 0.75
VPS72-204ENST00000471423 PSPC1Q8WXF1 523 aaKnown RBP19.73■□□□□ 0.75
VPS72-204ENST00000471423 LRCH3Q96II8 777 aa19.73■□□□□ 0.75
VPS72-204ENST00000471423 CDK5RAP3Q96JB5 506 aa19.73■□□□□ 0.75
VPS72-204ENST00000471423 NLRP4Q96MN2 994 aa19.73■□□□□ 0.75
VPS72-204ENST00000471423 CLIC6Q96NY7 704 aa19.73■□□□□ 0.75
VPS72-204ENST00000471423 PNMA5Q96PV4 448 aa19.73■□□□□ 0.75
VPS72-204ENST00000471423 PLIN2Q99541 437 aa19.73■□□□□ 0.75
VPS72-204ENST00000471423 CSRNP2Q9H175 543 aa19.73■□□□□ 0.75
VPS72-204ENST00000471423 NOC2LQ9Y3T9 749 aaKnown RBP19.73■□□□□ 0.75
VPS72-204ENST00000471423 COL4A3BPQ9Y5P4 624 aa19.73■□□□□ 0.75
VPS72-204ENST00000471423 MORC2Q9Y6X9 1032 aaPredicted RBP19.73■□□□□ 0.75
VPS72-204ENST00000471423 GRXCR1A8MXD5 290 aa19.72■□□□□ 0.75
VPS72-204ENST00000471423 EFCAB14O75071 495 aa19.72■□□□□ 0.75
VPS72-204ENST00000471423 RPS6KA5O75582 802 aa19.72■□□□□ 0.75
VPS72-204ENST00000471423 ATP2A2P16615 1042 aaKnown RBP19.72■□□□□ 0.75
VPS72-204ENST00000471423 UBA7P41226 1012 aa19.72■□□□□ 0.75
VPS72-204ENST00000471423 FXR1P51114 621 aaKnown RBP eCLIP19.72■□□□□ 0.75
VPS72-204ENST00000471423 DEFB103AP81534 67 aa19.72■□□□□ 0.75
VPS72-204ENST00000471423 SPECC1Q5M775 1068 aa19.72■□□□□ 0.75
VPS72-204ENST00000471423 ZNF710Q8N1W2 664 aa19.72■□□□□ 0.75
VPS72-204ENST00000471423 TCP11Q8WWU5 503 aa19.72■□□□□ 0.75
VPS72-204ENST00000471423 PRPF31Q8WWY3 499 aaKnown RBP19.72■□□□□ 0.75
VPS72-204ENST00000471423 NT5C3AQ9H0P0 336 aa19.72■□□□□ 0.75
VPS72-204ENST00000471423 DNM3Q9UQ16 869 aa19.72■□□□□ 0.75
VPS72-204ENST00000471423 PTPRSQ13332 1948 aa19.72■□□□□ 0.75
VPS72-204ENST00000471423 A0A087WZ62 844 aa19.71■□□□□ 0.75
VPS72-204ENST00000471423 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.71■□□□□ 0.75
VPS72-204ENST00000471423 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.71■□□□□ 0.75
VPS72-204ENST00000471423 YEATS4O95619 227 aa19.71■□□□□ 0.75
VPS72-204ENST00000471423 EYA4O95677 639 aa19.71■□□□□ 0.75
VPS72-204ENST00000471423 SMAD3P84022 425 aaKnown RBP19.71■□□□□ 0.75
VPS72-204ENST00000471423 DNM1Q05193 864 aaKnown RBP19.71■□□□□ 0.75
VPS72-204ENST00000471423 LAMTOR4Q0VGL1 99 aa19.71■□□□□ 0.75
VPS72-204ENST00000471423 TMEM119Q4V9L6 283 aa19.71■□□□□ 0.75
VPS72-204ENST00000471423 PADI6Q6TGC4 694 aa19.71■□□□□ 0.75
VPS72-204ENST00000471423 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.71■□□□□ 0.75
VPS72-204ENST00000471423 MAEAQ7L5Y9 396 aa19.71■□□□□ 0.75
VPS72-204ENST00000471423 FAM228AQ86W67 206 aa19.71■□□□□ 0.75
VPS72-204ENST00000471423 KRI1Q8N9T8 703 aaKnown RBP19.71■□□□□ 0.75
VPS72-204ENST00000471423 SLC9A7Q96T83 725 aa19.71■□□□□ 0.75
VPS72-204ENST00000471423 FDXACB1Q9BRP7 624 aaPredicted RBP19.71■□□□□ 0.75
VPS72-204ENST00000471423 SZT2Q5T011 3432 aa19.71■□□□□ 0.75
VPS72-204ENST00000471423 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.7■□□□□ 0.74
VPS72-204ENST00000471423 SPTLC2O15270 562 aa19.7■□□□□ 0.74
VPS72-204ENST00000471423 CSDE1O75534 798 aaKnown RBP19.7■□□□□ 0.74
VPS72-204ENST00000471423 DARSP14868 501 aaKnown RBP19.7■□□□□ 0.74
VPS72-204ENST00000471423 EIF4BP23588 611 aaKnown RBP19.7■□□□□ 0.74
VPS72-204ENST00000471423 ANP32AP39687 249 aaKnown RBP19.7■□□□□ 0.74
VPS72-204ENST00000471423 CDC42EP1Q00587 391 aa19.7■□□□□ 0.74
VPS72-204ENST00000471423 NFX1Q12986 1120 aaKnown RBP19.7■□□□□ 0.74
VPS72-204ENST00000471423 KARSQ15046 597 aaKnown RBP19.7■□□□□ 0.74
VPS72-204ENST00000471423 ATL3Q6DD88 541 aa19.7■□□□□ 0.74
VPS72-204ENST00000471423 USP49Q70CQ1 688 aa19.7■□□□□ 0.74
VPS72-204ENST00000471423 TMCO2Q7Z6W1 182 aaPredicted RBP19.7■□□□□ 0.74
VPS72-204ENST00000471423 ZNF410Q86VK4 478 aa19.7■□□□□ 0.74
VPS72-204ENST00000471423 MCPH1Q8NEM0 835 aa19.7■□□□□ 0.74
VPS72-204ENST00000471423 RASSF8Q8NHQ8 419 aa19.7■□□□□ 0.74
VPS72-204ENST00000471423 ASAP3Q8TDY4 903 aa19.7■□□□□ 0.74
VPS72-204ENST00000471423 LINC01599Q8WXQ3 324 aa19.7■□□□□ 0.74
VPS72-204ENST00000471423 SYMPKQ92797 1274 aaKnown RBP19.7■□□□□ 0.74
VPS72-204ENST00000471423 CALML4Q96GE6 196 aa19.7■□□□□ 0.74
VPS72-204ENST00000471423 EPSTI1Q96J88 318 aa19.7■□□□□ 0.74
VPS72-204ENST00000471423 GCOM2Q9BZD3 368 aaPredicted RBP19.7■□□□□ 0.74
VPS72-204ENST00000471423 POLR3FQ9H1D9 316 aaPredicted RBP19.7■□□□□ 0.74
VPS72-204ENST00000471423 ERVK-5Q9HDB9 667 aa19.7■□□□□ 0.74
VPS72-204ENST00000471423 GPRC5CQ9NQ84 441 aa19.7■□□□□ 0.74
VPS72-204ENST00000471423 ST3GAL5Q9UNP4 418 aa19.7■□□□□ 0.74
VPS72-204ENST00000471423 GPR182O15218 404 aa19.69■□□□□ 0.74
VPS72-204ENST00000471423 SLC26A4O43511 780 aa19.69■□□□□ 0.74
VPS72-204ENST00000471423 FGFR4P22455 802 aa19.69■□□□□ 0.74
VPS72-204ENST00000471423 DDIT3P35638 169 aa19.69■□□□□ 0.74
VPS72-204ENST00000471423 ARL2P36404 184 aa19.69■□□□□ 0.74
VPS72-204ENST00000471423 FAM102BQ5T8I3 360 aa19.69■□□□□ 0.74
VPS72-204ENST00000471423 CHAMP1Q96JM3 812 aa19.69■□□□□ 0.74
VPS72-204ENST00000471423 TMX1Q9H3N1 280 aa19.69■□□□□ 0.74
VPS72-204ENST00000471423 ASAP2O43150 1006 aa19.68■□□□□ 0.74
VPS72-204ENST00000471423 PPP6R2O75170 966 aa19.68■□□□□ 0.74
VPS72-204ENST00000471423 AMHP03971 560 aa19.68■□□□□ 0.74
VPS72-204ENST00000471423 SSBP05455 408 aaKnown RBP eCLIP19.68■□□□□ 0.74
VPS72-204ENST00000471423 SRGAP2CP0DJJ0 459 aa19.68■□□□□ 0.74
VPS72-204ENST00000471423 CYP11B2P19099 503 aa19.68■□□□□ 0.74
VPS72-204ENST00000471423 PLCG1P19174 1290 aa19.68■□□□□ 0.74
VPS72-204ENST00000471423 PBX2P40425 430 aa19.68■□□□□ 0.74
VPS72-204ENST00000471423 RABGGTBP53611 331 aa19.68■□□□□ 0.74
VPS72-204ENST00000471423 MXD4Q14582 209 aaPredicted RBP19.68■□□□□ 0.74
VPS72-204ENST00000471423 ODR4Q5SWX8 454 aa19.68■□□□□ 0.74
VPS72-204ENST00000471423 HERC6Q8IVU3 1022 aa19.68■□□□□ 0.74
VPS72-204ENST00000471423 MYOCDQ8IZQ8 938 aa19.68■□□□□ 0.74
VPS72-204ENST00000471423 KCTD17Q8N5Z5 321 aa19.68■□□□□ 0.74
VPS72-204ENST00000471423 RNF149Q8NC42 400 aa19.68■□□□□ 0.74
VPS72-204ENST00000471423 PHOSPHO2Q8TCD6 241 aa19.68■□□□□ 0.74
VPS72-204ENST00000471423 LRRC15Q8TF66 581 aa19.68■□□□□ 0.74
VPS72-204ENST00000471423 FTHL17Q9BXU8 183 aa19.68■□□□□ 0.74
VPS72-204ENST00000471423 PBX4Q9BYU1 374 aa19.68■□□□□ 0.74
VPS72-204ENST00000471423 CCSER1Q9C0I3 900 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms