RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 KINO60870 393 aaKnown RBP10.98□□□□□ -0.65
SF3A1-207ENST00000471342 MYL1P05976 194 aa10.98□□□□□ -0.65
SF3A1-207ENST00000471342 NCKAP1LP55160 1127 aa10.98□□□□□ -0.65
SF3A1-207ENST00000471342 RTP1P59025 263 aa10.98□□□□□ -0.65
SF3A1-207ENST00000471342 RBL2Q08999 1139 aa10.98□□□□□ -0.65
SF3A1-207ENST00000471342 PPFIA1Q13136 1202 aa10.98□□□□□ -0.65
SF3A1-207ENST00000471342 CAPSQ13938 189 aa10.98□□□□□ -0.65
SF3A1-207ENST00000471342 MBTPS1Q14703 1052 aa10.98□□□□□ -0.65
SF3A1-207ENST00000471342 NCAPHQ15003 741 aa10.98□□□□□ -0.65
SF3A1-207ENST00000471342 SKOR2Q2VWA4 1001 aaPredicted RBP10.98□□□□□ -0.65
SF3A1-207ENST00000471342 DPCR1Q3MIW9 517 aa10.98□□□□□ -0.65
SF3A1-207ENST00000471342 ZCWPW2Q504Y3 356 aa10.98□□□□□ -0.65
SF3A1-207ENST00000471342 CDCA2Q69YH5 1023 aaPredicted RBP10.98□□□□□ -0.65
SF3A1-207ENST00000471342 ZNF720Q7Z2F6 126 aa10.98□□□□□ -0.65
SF3A1-207ENST00000471342 RNF180Q86T96 592 aa10.98□□□□□ -0.65
SF3A1-207ENST00000471342 FAM126BQ8IXS8 530 aa10.98□□□□□ -0.65
SF3A1-207ENST00000471342 SMYD4Q8IYR2 804 aaPredicted RBP10.98□□□□□ -0.65
SF3A1-207ENST00000471342 SCFD1Q8WVM8 642 aa10.98□□□□□ -0.65
SF3A1-207ENST00000471342 PRPF31Q8WWY3 499 aaKnown RBP10.98□□□□□ -0.65
SF3A1-207ENST00000471342 FAM167AQ96KS9 214 aa10.98□□□□□ -0.65
SF3A1-207ENST00000471342 GSDMAQ96QA5 445 aa10.98□□□□□ -0.65
SF3A1-207ENST00000471342 PYM1Q9BRP8 204 aaKnown RBP10.98□□□□□ -0.65
SF3A1-207ENST00000471342 HAPLN2Q9GZV7 340 aa10.98□□□□□ -0.65
SF3A1-207ENST00000471342 ST6GALNAC4Q9H4F1 302 aa10.98□□□□□ -0.65
SF3A1-207ENST00000471342 MINDY3Q9H8M7 445 aa10.98□□□□□ -0.65
SF3A1-207ENST00000471342 OLFML3Q9NRN5 406 aa10.98□□□□□ -0.65
SF3A1-207ENST00000471342 KCND2Q9NZV8 630 aa10.98□□□□□ -0.65
SF3A1-207ENST00000471342 ARHGAP28Q9P2N2 729 aa10.98□□□□□ -0.65
SF3A1-207ENST00000471342 ODF2LQ9ULJ1 636 aa10.98□□□□□ -0.65
SF3A1-207ENST00000471342 ARID2Q68CP9 1835 aa10.98□□□□□ -0.65
SF3A1-207ENST00000471342 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.97□□□□□ -0.65
SF3A1-207ENST00000471342 SMIM35A0A1B0GVV1 85 aa10.97□□□□□ -0.65
SF3A1-207ENST00000471342 ARVCFO00192 962 aa10.97□□□□□ -0.65
SF3A1-207ENST00000471342 MEFVO15553 781 aaPredicted RBP10.97□□□□□ -0.65
SF3A1-207ENST00000471342 TGFB1I1O43294 461 aa10.97□□□□□ -0.65
SF3A1-207ENST00000471342 B4GALT4O60513 344 aa10.97□□□□□ -0.65
SF3A1-207ENST00000471342 DKC1O60832 514 aaKnown RBP eCLIP10.97□□□□□ -0.65
SF3A1-207ENST00000471342 CHRNA1P02708 482 aa10.97□□□□□ -0.65
SF3A1-207ENST00000471342 MYBP10242 640 aa10.97□□□□□ -0.65
SF3A1-207ENST00000471342 PLS3P13797 630 aa10.97□□□□□ -0.65
SF3A1-207ENST00000471342 ITGB8P26012 769 aa10.97□□□□□ -0.65
SF3A1-207ENST00000471342 NMT1P30419 496 aaKnown RBP10.97□□□□□ -0.65
SF3A1-207ENST00000471342 TXLNAP40222 546 aa10.97□□□□□ -0.65
SF3A1-207ENST00000471342 RFC5P40937 340 aa10.97□□□□□ -0.65
SF3A1-207ENST00000471342 PRCPP42785 496 aa10.97□□□□□ -0.65
SF3A1-207ENST00000471342 NPTX2P47972 431 aa10.97□□□□□ -0.65
SF3A1-207ENST00000471342 CLCN3P51790 818 aa10.97□□□□□ -0.65
SF3A1-207ENST00000471342 MCCD1P59942 119 aaPredicted RBP10.97□□□□□ -0.65
SF3A1-207ENST00000471342 BMT2Q1RMZ1 405 aa10.97□□□□□ -0.65
SF3A1-207ENST00000471342 TCTN1Q2MV58 587 aa10.97□□□□□ -0.65
SF3A1-207ENST00000471342 FAM26DQ5JW98 314 aa10.97□□□□□ -0.65
SF3A1-207ENST00000471342 ISM2Q6H9L7 571 aa10.97□□□□□ -0.65
SF3A1-207ENST00000471342 KANK3Q6NY19 840 aa10.97□□□□□ -0.65
SF3A1-207ENST00000471342 SLC39A4Q6P5W5 647 aa10.97□□□□□ -0.65
SF3A1-207ENST00000471342 SLC39A5Q6ZMH5 540 aa10.97□□□□□ -0.65
SF3A1-207ENST00000471342 C11orf57Q6ZUT1 292 aaPredicted RBP10.97□□□□□ -0.65
SF3A1-207ENST00000471342 MAEAQ7L5Y9 396 aa10.97□□□□□ -0.65
SF3A1-207ENST00000471342 OTUD6AQ7L8S5 288 aa10.97□□□□□ -0.65
SF3A1-207ENST00000471342 SFR1Q86XK3 245 aa10.97□□□□□ -0.65
SF3A1-207ENST00000471342 ADSSL1Q8N142 457 aa10.97□□□□□ -0.65
SF3A1-207ENST00000471342 PCSK9Q8NBP7 692 aaKnown RBP10.97□□□□□ -0.65
SF3A1-207ENST00000471342 ARRDC4Q8NCT1 418 aa10.97□□□□□ -0.65
SF3A1-207ENST00000471342 SPIRE2Q8WWL2 714 aa10.97□□□□□ -0.65
SF3A1-207ENST00000471342 KIFC3Q9BVG8 833 aa10.97□□□□□ -0.65
SF3A1-207ENST00000471342 TRPV6Q9H1D0 765 aa10.97□□□□□ -0.65
SF3A1-207ENST00000471342 KCTD10Q9H3F6 313 aa10.97□□□□□ -0.65
SF3A1-207ENST00000471342 SEMA6BQ9H3T3 888 aa10.97□□□□□ -0.65
SF3A1-207ENST00000471342 TRMT13Q9NUP7 481 aaKnown RBP10.97□□□□□ -0.65
SF3A1-207ENST00000471342 USP20Q9Y2K6 914 aa10.97□□□□□ -0.65
SF3A1-207ENST00000471342 SYCE3A1L190 88 aa10.96□□□□□ -0.65
SF3A1-207ENST00000471342 RRN3P2A6NIE6 340 aa10.96□□□□□ -0.65
SF3A1-207ENST00000471342 CABYRO75952 493 aa10.96□□□□□ -0.65
SF3A1-207ENST00000471342 SSBP05455 408 aaKnown RBP eCLIP10.96□□□□□ -0.65
SF3A1-207ENST00000471342 IGBP1P78318 339 aa10.96□□□□□ -0.65
SF3A1-207ENST00000471342 GTF2BQ00403 316 aa10.96□□□□□ -0.65
SF3A1-207ENST00000471342 PTPN11Q06124 597 aaPredicted RBP10.96□□□□□ -0.65
SF3A1-207ENST00000471342 FAAP100Q0VG06 881 aa10.96□□□□□ -0.65
SF3A1-207ENST00000471342 IQCB1Q15051 598 aa10.96□□□□□ -0.65
SF3A1-207ENST00000471342 LRRC26Q2I0M4 334 aa10.96□□□□□ -0.65
SF3A1-207ENST00000471342 ZC2HC1CQ53FD0 456 aaPredicted RBP10.96□□□□□ -0.65
SF3A1-207ENST00000471342 EFCAB12Q6NXP0 572 aa10.96□□□□□ -0.65
SF3A1-207ENST00000471342 ANKRD33Q7Z3H0 272 aa10.96□□□□□ -0.65
SF3A1-207ENST00000471342 IRF2BP1Q8IU81 584 aa10.96□□□□□ -0.65
SF3A1-207ENST00000471342 ZC3H3Q8IXZ2 948 aaKnown RBP10.96□□□□□ -0.65
SF3A1-207ENST00000471342 CEP57L1Q8IYX8 460 aa10.96□□□□□ -0.65
SF3A1-207ENST00000471342 ZNF507Q8TCN5 953 aa10.96□□□□□ -0.65
SF3A1-207ENST00000471342 CDK5RAP3Q96JB5 506 aa10.96□□□□□ -0.65
SF3A1-207ENST00000471342 DUSP9Q99956 384 aaKnown RBP10.96□□□□□ -0.65
SF3A1-207ENST00000471342 POLR3FQ9H1D9 316 aaPredicted RBP10.96□□□□□ -0.65
SF3A1-207ENST00000471342 ATP6V0A4Q9HBG4 840 aa10.96□□□□□ -0.65
SF3A1-207ENST00000471342 PANK4Q9NVE7 773 aa10.96□□□□□ -0.65
SF3A1-207ENST00000471342 TRPC6Q9Y210 931 aa10.96□□□□□ -0.65
SF3A1-207ENST00000471342 UMODL1Q5DID0 1318 aa10.95□□□□□ -0.66
SF3A1-207ENST00000471342 TISP43B9A030 160 aa10.95□□□□□ -0.66
SF3A1-207ENST00000471342 BIN1O00499 593 aa10.95□□□□□ -0.66
SF3A1-207ENST00000471342 MAGEB2O15479 319 aa10.95□□□□□ -0.66
SF3A1-207ENST00000471342 FAM189A1O60320 539 aa10.95□□□□□ -0.66
SF3A1-207ENST00000471342 VTNP04004 478 aa10.95□□□□□ -0.66
SF3A1-207ENST00000471342 MAPTP10636 758 aaKnown RBP10.95□□□□□ -0.66
SF3A1-207ENST00000471342 PTMSP20962 102 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms