RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 FXR1P51114 621 aaKnown RBP eCLIP21.99■■□□□ 1.11
HDAC7-220ENST00000471235 DEFB103AP81534 67 aa21.99■■□□□ 1.11
HDAC7-220ENST00000471235 PAK2Q13177 524 aa21.99■■□□□ 1.11
HDAC7-220ENST00000471235 GRB10Q13322 594 aa21.99■■□□□ 1.11
HDAC7-220ENST00000471235 STK38Q15208 465 aa21.99■■□□□ 1.11
HDAC7-220ENST00000471235 ZRSR1Q15695 479 aaKnown RBP21.99■■□□□ 1.11
HDAC7-220ENST00000471235 TMEM119Q4V9L6 283 aa21.99■■□□□ 1.11
HDAC7-220ENST00000471235 RHPN2Q8IUC4 686 aa21.99■■□□□ 1.11
HDAC7-220ENST00000471235 ZNF710Q8N1W2 664 aa21.99■■□□□ 1.11
HDAC7-220ENST00000471235 LINC00301Q8NCQ3 95 aa21.99■■□□□ 1.11
HDAC7-220ENST00000471235 TCP11Q8WWU5 503 aa21.99■■□□□ 1.11
HDAC7-220ENST00000471235 NLRP7Q8WX94 980 aa21.99■■□□□ 1.11
HDAC7-220ENST00000471235 PSPC1Q8WXF1 523 aaKnown RBP21.99■■□□□ 1.11
HDAC7-220ENST00000471235 LRCH3Q96II8 777 aa21.99■■□□□ 1.11
HDAC7-220ENST00000471235 SCLT1Q96NL6 688 aa21.99■■□□□ 1.11
HDAC7-220ENST00000471235 CSRNP2Q9H175 543 aa21.99■■□□□ 1.11
HDAC7-220ENST00000471235 ERVK-5Q9HDB9 667 aa21.99■■□□□ 1.11
HDAC7-220ENST00000471235 SRPRBQ9Y5M8 271 aaKnown RBP21.99■■□□□ 1.11
HDAC7-220ENST00000471235 COL4A3BPQ9Y5P4 624 aa21.99■■□□□ 1.11
HDAC7-220ENST00000471235 GRXCR1A8MXD5 290 aa21.98■■□□□ 1.11
HDAC7-220ENST00000471235 E9PMD0 336 aa21.98■■□□□ 1.11
HDAC7-220ENST00000471235 SLC26A4O43511 780 aa21.98■■□□□ 1.11
HDAC7-220ENST00000471235 EFCAB14O75071 495 aa21.98■■□□□ 1.11
HDAC7-220ENST00000471235 YEATS4O95619 227 aa21.98■■□□□ 1.11
HDAC7-220ENST00000471235 EYA4O95677 639 aa21.98■■□□□ 1.11
HDAC7-220ENST00000471235 FAM228AQ86W67 206 aa21.98■■□□□ 1.11
HDAC7-220ENST00000471235 KSR1Q8IVT5 923 aa21.98■■□□□ 1.11
HDAC7-220ENST00000471235 CLIC6Q96NY7 704 aa21.98■■□□□ 1.11
HDAC7-220ENST00000471235 SLC9A7Q96T83 725 aa21.98■■□□□ 1.11
HDAC7-220ENST00000471235 BHMT2Q9H2M3 363 aa21.98■■□□□ 1.11
HDAC7-220ENST00000471235 DAXXQ9UER7 740 aaPredicted RBP21.98■■□□□ 1.11
HDAC7-220ENST00000471235 PADI3Q9ULW8 664 aa21.98■■□□□ 1.11
HDAC7-220ENST00000471235 LAMA2P24043 3122 aaKnown RBP21.98■■□□□ 1.11
HDAC7-220ENST00000471235 FNDC1Q4ZHG4 1894 aaPredicted RBP21.98■■□□□ 1.11
HDAC7-220ENST00000471235 A0A087WZ62 844 aa21.97■■□□□ 1.11
HDAC7-220ENST00000471235 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.97■■□□□ 1.11
HDAC7-220ENST00000471235 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.97■■□□□ 1.11
HDAC7-220ENST00000471235 RPS6KA5O75582 802 aa21.97■■□□□ 1.11
HDAC7-220ENST00000471235 ATP2A2P16615 1042 aaKnown RBP21.97■■□□□ 1.11
HDAC7-220ENST00000471235 SMAD3P84022 425 aaKnown RBP21.97■■□□□ 1.11
HDAC7-220ENST00000471235 PADI6Q6TGC4 694 aa21.97■■□□□ 1.11
HDAC7-220ENST00000471235 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.97■■□□□ 1.11
HDAC7-220ENST00000471235 ZNF410Q86VK4 478 aa21.97■■□□□ 1.11
HDAC7-220ENST00000471235 PRPF31Q8WWY3 499 aaKnown RBP21.97■■□□□ 1.11
HDAC7-220ENST00000471235 LINC01599Q8WXQ3 324 aa21.97■■□□□ 1.11
HDAC7-220ENST00000471235 CDK5RAP3Q96JB5 506 aa21.97■■□□□ 1.11
HDAC7-220ENST00000471235 NLRP4Q96MN2 994 aa21.97■■□□□ 1.11
HDAC7-220ENST00000471235 PLIN2Q99541 437 aa21.97■■□□□ 1.11
HDAC7-220ENST00000471235 FDXACB1Q9BRP7 624 aaPredicted RBP21.97■■□□□ 1.11
HDAC7-220ENST00000471235 NT5C3AQ9H0P0 336 aa21.97■■□□□ 1.11
HDAC7-220ENST00000471235 COL4A6Q14031 1691 aa21.96■■□□□ 1.11
HDAC7-220ENST00000471235 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.96■■□□□ 1.11
HDAC7-220ENST00000471235 SPTLC2O15270 562 aa21.96■■□□□ 1.11
HDAC7-220ENST00000471235 DARSP14868 501 aaKnown RBP21.96■■□□□ 1.11
HDAC7-220ENST00000471235 EIF4BP23588 611 aaKnown RBP21.96■■□□□ 1.11
HDAC7-220ENST00000471235 DDIT3P35638 169 aa21.96■■□□□ 1.11
HDAC7-220ENST00000471235 UBA7P41226 1012 aa21.96■■□□□ 1.11
HDAC7-220ENST00000471235 DNM1Q05193 864 aaKnown RBP21.96■■□□□ 1.11
HDAC7-220ENST00000471235 LAMTOR4Q0VGL1 99 aa21.96■■□□□ 1.11
HDAC7-220ENST00000471235 SPECC1Q5M775 1068 aa21.96■■□□□ 1.11
HDAC7-220ENST00000471235 USP49Q70CQ1 688 aa21.96■■□□□ 1.11
HDAC7-220ENST00000471235 KRI1Q8N9T8 703 aaKnown RBP21.96■■□□□ 1.11
HDAC7-220ENST00000471235 MCPH1Q8NEM0 835 aa21.96■■□□□ 1.11
HDAC7-220ENST00000471235 ASAP3Q8TDY4 903 aa21.96■■□□□ 1.11
HDAC7-220ENST00000471235 POLR3FQ9H1D9 316 aaPredicted RBP21.96■■□□□ 1.11
HDAC7-220ENST00000471235 TMX1Q9H3N1 280 aa21.96■■□□□ 1.11
HDAC7-220ENST00000471235 GPRC5CQ9NQ84 441 aa21.96■■□□□ 1.11
HDAC7-220ENST00000471235 DNM3Q9UQ16 869 aa21.96■■□□□ 1.11
HDAC7-220ENST00000471235 RALGAPA2Q2PPJ7 1873 aa21.96■■□□□ 1.11
HDAC7-220ENST00000471235 CYP11B2P19099 503 aa21.95■■□□□ 1.1
HDAC7-220ENST00000471235 ARL2P36404 184 aa21.95■■□□□ 1.1
HDAC7-220ENST00000471235 CDC42EP1Q00587 391 aa21.95■■□□□ 1.1
HDAC7-220ENST00000471235 NFX1Q12986 1120 aaKnown RBP21.95■■□□□ 1.1
HDAC7-220ENST00000471235 KARSQ15046 597 aaKnown RBP21.95■■□□□ 1.1
HDAC7-220ENST00000471235 ATL3Q6DD88 541 aa21.95■■□□□ 1.1
HDAC7-220ENST00000471235 TMCO2Q7Z6W1 182 aaPredicted RBP21.95■■□□□ 1.1
HDAC7-220ENST00000471235 LRRC15Q8TF66 581 aa21.95■■□□□ 1.1
HDAC7-220ENST00000471235 SYMPKQ92797 1274 aaKnown RBP21.95■■□□□ 1.1
HDAC7-220ENST00000471235 CALML4Q96GE6 196 aa21.95■■□□□ 1.1
HDAC7-220ENST00000471235 GCOM2Q9BZD3 368 aaPredicted RBP21.95■■□□□ 1.1
HDAC7-220ENST00000471235 CCSER1Q9C0I3 900 aa21.95■■□□□ 1.1
HDAC7-220ENST00000471235 ST3GAL5Q9UNP4 418 aa21.95■■□□□ 1.1
HDAC7-220ENST00000471235 PPP6R2O75170 966 aa21.94■■□□□ 1.1
HDAC7-220ENST00000471235 AMHP03971 560 aa21.94■■□□□ 1.1
HDAC7-220ENST00000471235 PLCG1P19174 1290 aa21.94■■□□□ 1.1
HDAC7-220ENST00000471235 CAPSQ13938 189 aa21.94■■□□□ 1.1
HDAC7-220ENST00000471235 ODR4Q5SWX8 454 aa21.94■■□□□ 1.1
HDAC7-220ENST00000471235 MAEAQ7L5Y9 396 aa21.94■■□□□ 1.1
HDAC7-220ENST00000471235 HERC6Q8IVU3 1022 aa21.94■■□□□ 1.1
HDAC7-220ENST00000471235 KCTD17Q8N5Z5 321 aa21.94■■□□□ 1.1
HDAC7-220ENST00000471235 PHOSPHO2Q8TCD6 241 aa21.94■■□□□ 1.1
HDAC7-220ENST00000471235 EPSTI1Q96J88 318 aa21.94■■□□□ 1.1
HDAC7-220ENST00000471235 CHAMP1Q96JM3 812 aa21.94■■□□□ 1.1
HDAC7-220ENST00000471235 IFT122Q9HBG6 1241 aa21.94■■□□□ 1.1
HDAC7-220ENST00000471235 COL4A4P53420 1690 aaPredicted RBP21.94■■□□□ 1.1
HDAC7-220ENST00000471235 GPR182O15218 404 aa21.93■■□□□ 1.1
HDAC7-220ENST00000471235 ASAP2O43150 1006 aa21.93■■□□□ 1.1
HDAC7-220ENST00000471235 MGEA5O60502 916 aa21.93■■□□□ 1.1
HDAC7-220ENST00000471235 FGFR4P22455 802 aa21.93■■□□□ 1.1
HDAC7-220ENST00000471235 GLRA2P23416 452 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms