RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 ACTR2P61160 394 aa13.72□□□□□ -0.21
LSM2-209ENST00000470083 IMMTQ16891 758 aaKnown RBP13.72□□□□□ -0.21
LSM2-209ENST00000470083 KIZQ2M2Z5 673 aa13.72□□□□□ -0.21
LSM2-209ENST00000470083 ECHDC2Q86YB7 292 aa13.72□□□□□ -0.21
LSM2-209ENST00000470083 MAML2Q8IZL2 1156 aaPredicted RBP13.72□□□□□ -0.21
LSM2-209ENST00000470083 RSAD2Q8WXG1 361 aa13.72□□□□□ -0.21
LSM2-209ENST00000470083 RTKNQ9BST9 563 aa13.72□□□□□ -0.21
LSM2-209ENST00000470083 MRPL9Q9BYD2 267 aaKnown RBP13.72□□□□□ -0.21
LSM2-209ENST00000470083 JADE2Q9NQC1 790 aa13.72□□□□□ -0.21
LSM2-209ENST00000470083 ARHGEF3Q9NR81 526 aa13.72□□□□□ -0.21
LSM2-209ENST00000470083 FAM208BQ5VWN6 2430 aa13.71□□□□□ -0.21
LSM2-209ENST00000470083 SPDYE4A6NLX3 237 aa13.71□□□□□ -0.21
LSM2-209ENST00000470083 NT5C1B-RDH14C9J2C7 533 aa13.71□□□□□ -0.21
LSM2-209ENST00000470083 HBP1O60381 514 aa13.71□□□□□ -0.21
LSM2-209ENST00000470083 ZNF528Q3MIS6 628 aa13.71□□□□□ -0.21
LSM2-209ENST00000470083 DDX53Q86TM3 631 aaKnown RBP13.71□□□□□ -0.21
LSM2-209ENST00000470083 TMEM173Q86WV6 379 aaPredicted RBP13.71□□□□□ -0.21
LSM2-209ENST00000470083 SLC44A3Q8N4M1 653 aa13.71□□□□□ -0.21
LSM2-209ENST00000470083 PIBF1Q8WXW3 757 aa13.71□□□□□ -0.21
LSM2-209ENST00000470083 NXPE3Q969Y0 559 aa13.71□□□□□ -0.21
LSM2-209ENST00000470083 PPP1R16BQ96T49 567 aa13.71□□□□□ -0.21
LSM2-209ENST00000470083 EPS15L1Q9UBC2 864 aa13.71□□□□□ -0.21
LSM2-209ENST00000470083 DENND4AQ7Z401 1863 aa13.71□□□□□ -0.21
LSM2-209ENST00000470083 COL1A2P08123 1366 aa13.71□□□□□ -0.22
LSM2-209ENST00000470083 LOXHD1Q8IVV2 1947 aa13.7□□□□□ -0.22
LSM2-209ENST00000470083 NFASCO94856 1347 aa13.7□□□□□ -0.22
LSM2-209ENST00000470083 DCDC2BA2VCK2 349 aa13.7□□□□□ -0.22
LSM2-209ENST00000470083 CARNS1A5YM72 827 aa13.7□□□□□ -0.22
LSM2-209ENST00000470083 POTEMA6NI47 508 aa13.7□□□□□ -0.22
LSM2-209ENST00000470083 GPR32O75388 356 aa13.7□□□□□ -0.22
LSM2-209ENST00000470083 GLULP15104 373 aa13.7□□□□□ -0.22
LSM2-209ENST00000470083 ZSCAN20P17040 1043 aaPredicted RBP13.7□□□□□ -0.22
LSM2-209ENST00000470083 TROAPQ12815 778 aa13.7□□□□□ -0.22
LSM2-209ENST00000470083 POTEGQ6S5H5 508 aa13.7□□□□□ -0.22
LSM2-209ENST00000470083 CYB5R4Q7L1T6 521 aa13.7□□□□□ -0.22
LSM2-209ENST00000470083 RNF169Q8NCN4 708 aa13.7□□□□□ -0.22
LSM2-209ENST00000470083 CMASQ8NFW8 434 aaPredicted RBP13.7□□□□□ -0.22
LSM2-209ENST00000470083 PJA1Q8NG27 643 aa13.7□□□□□ -0.22
LSM2-209ENST00000470083 GPR152Q8TDT2 470 aa13.7□□□□□ -0.22
LSM2-209ENST00000470083 SECISBP2LQ93073 1101 aaKnown RBP13.7□□□□□ -0.22
LSM2-209ENST00000470083 SDF4Q9BRK5 362 aa13.7□□□□□ -0.22
LSM2-209ENST00000470083 DSCC1Q9BVC3 393 aa13.7□□□□□ -0.22
LSM2-209ENST00000470083 KCNH7Q9NS40 1196 aa13.7□□□□□ -0.22
LSM2-209ENST00000470083 ZBTB47Q9UFB7 747 aaPredicted RBP13.7□□□□□ -0.22
LSM2-209ENST00000470083 RCAN3Q9UKA8 241 aa13.7□□□□□ -0.22
LSM2-209ENST00000470083 PCDHGA2Q9Y5H1 932 aa13.7□□□□□ -0.22
LSM2-209ENST00000470083 IGKV6D-21A0A0A0MT36 114 aa13.69□□□□□ -0.22
LSM2-209ENST00000470083 A0A0U1RQF3 1178 aa13.69□□□□□ -0.22
LSM2-209ENST00000470083 ZBTB42B2RXF5 422 aa13.69□□□□□ -0.22
LSM2-209ENST00000470083 ATG7O95352 703 aa13.69□□□□□ -0.22
LSM2-209ENST00000470083 SDSP20132 328 aa13.69□□□□□ -0.22
LSM2-209ENST00000470083 CLCN4P51793 760 aa13.69□□□□□ -0.22
LSM2-209ENST00000470083 PTPN14Q15678 1187 aa13.69□□□□□ -0.22
LSM2-209ENST00000470083 ZNF484Q5JVG2 852 aa13.69□□□□□ -0.22
LSM2-209ENST00000470083 ZNF598Q86UK7 904 aaKnown RBP13.69□□□□□ -0.22
LSM2-209ENST00000470083 HELQQ8TDG4 1101 aa13.69□□□□□ -0.22
LSM2-209ENST00000470083 RSPH1Q8WYR4 309 aa13.69□□□□□ -0.22
LSM2-209ENST00000470083 STAMQ92783 540 aa13.69□□□□□ -0.22
LSM2-209ENST00000470083 IGSF21Q96ID5 467 aa13.69□□□□□ -0.22
LSM2-209ENST00000470083 WDR6Q9NNW5 1121 aaKnown RBP13.69□□□□□ -0.22
LSM2-209ENST00000470083 FBXO4Q9UKT5 387 aa13.69□□□□□ -0.22
LSM2-209ENST00000470083 PCDHB15Q9Y5E8 787 aa13.69□□□□□ -0.22
LSM2-209ENST00000470083 FANCMQ8IYD8 2048 aa13.69□□□□□ -0.22
LSM2-209ENST00000470083 BAZ2BQ9UIF8 2168 aaKnown RBP13.69□□□□□ -0.22
LSM2-209ENST00000470083 PKD1L2Q7Z442 2459 aa13.69□□□□□ -0.22
LSM2-209ENST00000470083 LAMA4Q16363 1823 aa13.69□□□□□ -0.22
LSM2-209ENST00000470083 CACNA1IQ9P0X4 2223 aa13.68□□□□□ -0.22
LSM2-209ENST00000470083 ZC3H11AO75152 810 aaKnown RBP eCLIP13.68□□□□□ -0.22
LSM2-209ENST00000470083 C22orf31O95567 290 aa13.68□□□□□ -0.22
LSM2-209ENST00000470083 VTNP04004 478 aa13.68□□□□□ -0.22
LSM2-209ENST00000470083 GBP2P32456 591 aaPredicted RBP13.68□□□□□ -0.22
LSM2-209ENST00000470083 DCLRE1AQ6PJP8 1040 aa13.68□□□□□ -0.22
LSM2-209ENST00000470083 RRP36Q96EU6 259 aaKnown RBP13.68□□□□□ -0.22
LSM2-209ENST00000470083 CHAMP1Q96JM3 812 aa13.68□□□□□ -0.22
LSM2-209ENST00000470083 SPZ1Q9BXG8 430 aa13.68□□□□□ -0.22
LSM2-209ENST00000470083 EMILIN2Q9BXX0 1053 aa13.68□□□□□ -0.22
LSM2-209ENST00000470083 RHOBTB2Q9BYZ6 727 aa13.68□□□□□ -0.22
LSM2-209ENST00000470083 FOXQ1Q9C009 403 aa13.68□□□□□ -0.22
LSM2-209ENST00000470083 PSTPIP2Q9H939 334 aa13.68□□□□□ -0.22
LSM2-209ENST00000470083 SLC2A4RGQ9NR83 387 aa13.68□□□□□ -0.22
LSM2-209ENST00000470083 SMG5Q9UPR3 1016 aaKnown RBP13.68□□□□□ -0.22
LSM2-209ENST00000470083 SPDYE3A6NKU9 549 aa13.67□□□□□ -0.22
LSM2-209ENST00000470083 BACH1O14867 736 aa13.67□□□□□ -0.22
LSM2-209ENST00000470083 TGM1P22735 817 aa13.67□□□□□ -0.22
LSM2-209ENST00000470083 KLRC2P26717 231 aa13.67□□□□□ -0.22
LSM2-209ENST00000470083 COL9A2Q14055 689 aaPredicted RBP13.67□□□□□ -0.22
LSM2-209ENST00000470083 ANKRD45Q5TZF3 282 aa13.67□□□□□ -0.22
LSM2-209ENST00000470083 FAM160B1Q5W0V3 765 aa13.67□□□□□ -0.22
LSM2-209ENST00000470083 CYP26C1Q6V0L0 522 aa13.67□□□□□ -0.22
LSM2-209ENST00000470083 BCL7CQ8WUZ0 217 aaPredicted RBP13.67□□□□□ -0.22
LSM2-209ENST00000470083 ATRIPQ8WXE1 791 aa13.67□□□□□ -0.22
LSM2-209ENST00000470083 RILPL2Q969X0 211 aa13.67□□□□□ -0.22
LSM2-209ENST00000470083 KLHL5Q96PQ7 755 aa13.67□□□□□ -0.22
LSM2-209ENST00000470083 EPC1Q9H2F5 836 aa13.67□□□□□ -0.22
LSM2-209ENST00000470083 SENP2Q9HC62 589 aa13.67□□□□□ -0.22
LSM2-209ENST00000470083 SEC63Q9UGP8 760 aaKnown RBP13.67□□□□□ -0.22
LSM2-209ENST00000470083 CLUHO75153 1309 aa13.66□□□□□ -0.22
LSM2-209ENST00000470083 IFIT3O14879 490 aaKnown RBP13.66□□□□□ -0.22
LSM2-209ENST00000470083 LAMTOR5O43504 91 aa13.66□□□□□ -0.22
LSM2-209ENST00000470083 CNPP09543 421 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms