RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 DCXO43602 365 aa19.7■□□□□ 0.74
COL7A1-208ENST00000470076 FGF18O76093 207 aa19.7■□□□□ 0.74
COL7A1-208ENST00000470076 TDP2O95551 362 aa19.7■□□□□ 0.74
COL7A1-208ENST00000470076 FGFR1P11362 822 aa19.7■□□□□ 0.74
COL7A1-208ENST00000470076 NRIP1P48552 1158 aa19.7■□□□□ 0.74
COL7A1-208ENST00000470076 GPC3P51654 580 aa19.7■□□□□ 0.74
COL7A1-208ENST00000470076 COLGALT1Q8NBJ5 622 aa19.7■□□□□ 0.74
COL7A1-208ENST00000470076 MSLNLQ96KJ4 702 aa19.7■□□□□ 0.74
COL7A1-208ENST00000470076 TMEM117Q9H0C3 514 aa19.7■□□□□ 0.74
COL7A1-208ENST00000470076 TLR9Q9NR96 1032 aa19.7■□□□□ 0.74
COL7A1-208ENST00000470076 FSD2A1L4K1 749 aa19.69■□□□□ 0.74
COL7A1-208ENST00000470076 EYA4O95677 639 aa19.69■□□□□ 0.74
COL7A1-208ENST00000470076 DARSP14868 501 aaKnown RBP19.69■□□□□ 0.74
COL7A1-208ENST00000470076 LAG3P18627 525 aa19.69■□□□□ 0.74
COL7A1-208ENST00000470076 CDC42EP1Q00587 391 aa19.69■□□□□ 0.74
COL7A1-208ENST00000470076 STK3Q13188 491 aa19.69■□□□□ 0.74
COL7A1-208ENST00000470076 TARBP2Q15633 366 aaKnown RBP19.69■□□□□ 0.74
COL7A1-208ENST00000470076 NPY5RQ15761 445 aa19.69■□□□□ 0.74
COL7A1-208ENST00000470076 XKR3Q5GH77 459 aa19.69■□□□□ 0.74
COL7A1-208ENST00000470076 PDE12Q6L8Q7 609 aaKnown RBP19.69■□□□□ 0.74
COL7A1-208ENST00000470076 B3GNT9Q6UX72 402 aa19.69■□□□□ 0.74
COL7A1-208ENST00000470076 THNSL1Q8IYQ7 743 aa19.69■□□□□ 0.74
COL7A1-208ENST00000470076 MICAL1Q8TDZ2 1067 aa19.69■□□□□ 0.74
COL7A1-208ENST00000470076 GJA10Q969M2 543 aa19.69■□□□□ 0.74
COL7A1-208ENST00000470076 MBOAT7Q96N66 472 aa19.69■□□□□ 0.74
COL7A1-208ENST00000470076 SCLT1Q96NL6 688 aa19.69■□□□□ 0.74
COL7A1-208ENST00000470076 LARP6Q9BRS8 491 aaKnown RBP19.69■□□□□ 0.74
COL7A1-208ENST00000470076 NIFKQ9BYG3 293 aaKnown RBP19.69■□□□□ 0.74
COL7A1-208ENST00000470076 CWH43Q9H720 699 aa19.69■□□□□ 0.74
COL7A1-208ENST00000470076 TLE6Q9H808 572 aa19.69■□□□□ 0.74
COL7A1-208ENST00000470076 TRIOO75962 3097 aa19.68■□□□□ 0.74
COL7A1-208ENST00000470076 NONOQ15233 471 aaKnown RBP eCLIP19.68■□□□□ 0.74
COL7A1-208ENST00000470076 KRT25Q7Z3Z0 450 aa19.68■□□□□ 0.74
COL7A1-208ENST00000470076 RBM23Q86U06 439 aaKnown RBP19.68■□□□□ 0.74
COL7A1-208ENST00000470076 ABI1Q8IZP0 508 aa19.68■□□□□ 0.74
COL7A1-208ENST00000470076 ETNPPLQ8TBG4 499 aa19.68■□□□□ 0.74
COL7A1-208ENST00000470076 PDRG1Q9NUG6 133 aa19.68■□□□□ 0.74
COL7A1-208ENST00000470076 CLEC1BQ9P126 229 aa19.68■□□□□ 0.74
COL7A1-208ENST00000470076 HCSTQ9UBK5 93 aa19.68■□□□□ 0.74
COL7A1-208ENST00000470076 SEPT9Q9UHD8 586 aaPredicted RBP19.68■□□□□ 0.74
COL7A1-208ENST00000470076 LZTS1Q9Y250 596 aa19.68■□□□□ 0.74
COL7A1-208ENST00000470076 CDKL5O76039 1030 aa19.67■□□□□ 0.74
COL7A1-208ENST00000470076 COASYQ13057 564 aa19.67■□□□□ 0.74
COL7A1-208ENST00000470076 MTERF2Q49AM1 385 aa19.67■□□□□ 0.74
COL7A1-208ENST00000470076 ECHDC2Q86YB7 292 aa19.67■□□□□ 0.74
COL7A1-208ENST00000470076 LRRC43Q8N309 656 aa19.67■□□□□ 0.74
COL7A1-208ENST00000470076 SMRP1Q8NCR6 262 aa19.67■□□□□ 0.74
COL7A1-208ENST00000470076 NLRP7Q8WX94 980 aa19.67■□□□□ 0.74
COL7A1-208ENST00000470076 ZNF668Q96K58 619 aaPredicted RBP19.67■□□□□ 0.74
COL7A1-208ENST00000470076 AIFM3Q96NN9 605 aa19.67■□□□□ 0.74
COL7A1-208ENST00000470076 CASD1Q96PB1 797 aa19.67■□□□□ 0.74
COL7A1-208ENST00000470076 CDCA3Q99618 268 aaPredicted RBP19.67■□□□□ 0.74
COL7A1-208ENST00000470076 DDX25Q9UHL0 483 aaKnown RBP19.67■□□□□ 0.74
COL7A1-208ENST00000470076 PUF60Q9UHX1 559 aaKnown RBP19.67■□□□□ 0.74
COL7A1-208ENST00000470076 PCDHGC5Q9Y5F6 944 aa19.67■□□□□ 0.74
COL7A1-208ENST00000470076 GLP2RO95838 553 aa19.66■□□□□ 0.74
COL7A1-208ENST00000470076 EOMESO95936 686 aa19.66■□□□□ 0.74
COL7A1-208ENST00000470076 PPM1AP35813 382 aa19.66■□□□□ 0.74
COL7A1-208ENST00000470076 DNM2P50570 870 aa19.66■□□□□ 0.74
COL7A1-208ENST00000470076 ERVFC1P60507 584 aa19.66■□□□□ 0.74
COL7A1-208ENST00000470076 PLCB3Q01970 1234 aa19.66■□□□□ 0.74
COL7A1-208ENST00000470076 GCOM2Q9BZD3 368 aaPredicted RBP19.66■□□□□ 0.74
COL7A1-208ENST00000470076 RNF19AQ9NV58 838 aa19.66■□□□□ 0.74
COL7A1-208ENST00000470076 DACT1Q9NYF0 836 aa19.66■□□□□ 0.74
COL7A1-208ENST00000470076 IGKV6-21A0A0C4DH24 114 aa19.65■□□□□ 0.74
COL7A1-208ENST00000470076 A0A0U1RQF3 1178 aa19.65■□□□□ 0.74
COL7A1-208ENST00000470076 STBD1O95210 358 aa19.65■□□□□ 0.74
COL7A1-208ENST00000470076 XBP1P17861 261 aa19.65■□□□□ 0.74
COL7A1-208ENST00000470076 INF2Q27J81 1249 aa19.65■□□□□ 0.74
COL7A1-208ENST00000470076 KCNT2Q6UVM3 1135 aa19.65■□□□□ 0.74
COL7A1-208ENST00000470076 LRRC55Q6ZSA7 311 aa19.65■□□□□ 0.74
COL7A1-208ENST00000470076 MRPS27Q92552 414 aaKnown RBP19.65■□□□□ 0.74
COL7A1-208ENST00000470076 ZNF558Q96NG5 402 aa19.65■□□□□ 0.74
COL7A1-208ENST00000470076 CEP89Q96ST8 783 aa19.65■□□□□ 0.74
COL7A1-208ENST00000470076 PHF20Q9BVI0 1012 aa19.65■□□□□ 0.74
COL7A1-208ENST00000470076 CHST12Q9NRB3 414 aa19.65■□□□□ 0.74
COL7A1-208ENST00000470076 BARX2Q9UMQ3 279 aaPredicted RBP19.65■□□□□ 0.74
COL7A1-208ENST00000470076 KCNJ14Q9UNX9 436 aa19.65■□□□□ 0.74
COL7A1-208ENST00000470076 MUC6Q6W4X9 2439 aa19.65■□□□□ 0.74
COL7A1-208ENST00000470076 CCDC194A0A1B0GVG4 234 aa19.64■□□□□ 0.73
COL7A1-208ENST00000470076 FSCN2O14926 492 aa19.64■□□□□ 0.73
COL7A1-208ENST00000470076 PER2O15055 1255 aa19.64■□□□□ 0.73
COL7A1-208ENST00000470076 PSMC5P62195 406 aa19.64■□□□□ 0.73
COL7A1-208ENST00000470076 SCRN1Q12765 414 aa19.64■□□□□ 0.73
COL7A1-208ENST00000470076 DRP2Q13474 957 aa19.64■□□□□ 0.73
COL7A1-208ENST00000470076 DUSP6Q16828 381 aa19.64■□□□□ 0.73
COL7A1-208ENST00000470076 LETM2Q2VYF4 491 aa19.64■□□□□ 0.73
COL7A1-208ENST00000470076 ZNF410Q86VK4 478 aa19.64■□□□□ 0.73
COL7A1-208ENST00000470076 RNF169Q8NCN4 708 aa19.64■□□□□ 0.73
COL7A1-208ENST00000470076 FAM20AQ96MK3 541 aa19.64■□□□□ 0.73
COL7A1-208ENST00000470076 JPH2Q9BR39 696 aaPredicted RBP19.64■□□□□ 0.73
COL7A1-208ENST00000470076 INO80BQ9C086 356 aaPredicted RBP19.64■□□□□ 0.73
COL7A1-208ENST00000470076 SLKQ9H2G2 1235 aaPredicted RBP19.64■□□□□ 0.73
COL7A1-208ENST00000470076 STK36Q9NRP7 1315 aa19.64■□□□□ 0.73
COL7A1-208ENST00000470076 TMEM150BA6NC51 233 aa19.63■□□□□ 0.73
COL7A1-208ENST00000470076 DDX11L8A8MPP1 907 aa19.63■□□□□ 0.73
COL7A1-208ENST00000470076 SLC37A4O43826 429 aa19.63■□□□□ 0.73
COL7A1-208ENST00000470076 DKC1O60832 514 aaKnown RBP eCLIP19.63■□□□□ 0.73
COL7A1-208ENST00000470076 MAFO75444 373 aaPredicted RBP19.63■□□□□ 0.73
COL7A1-208ENST00000470076 GCFC2P16383 781 aaKnown RBP19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms