RNA–Protein interactions for RNA: ENST00000469769.1

THBS3-206, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-206ENST00000469769 PPP1R2P41236 205 aa11.5□□□□□ -0.57
THBS3-206ENST00000469769 ACLYP53396 1101 aa11.5□□□□□ -0.57
THBS3-206ENST00000469769 POLGP54098 1239 aaPredicted RBP11.5□□□□□ -0.57
THBS3-206ENST00000469769 PTPN11Q06124 597 aaPredicted RBP11.5□□□□□ -0.57
THBS3-206ENST00000469769 POU5F1BQ06416 359 aa11.5□□□□□ -0.57
THBS3-206ENST00000469769 TBC1D8BQ0IIM8 1120 aa11.5□□□□□ -0.57
THBS3-206ENST00000469769 PPFIA1Q13136 1202 aa11.5□□□□□ -0.57
THBS3-206ENST00000469769 HIC1Q14526 733 aa11.5□□□□□ -0.57
THBS3-206ENST00000469769 GRIK4Q16099 956 aa11.5□□□□□ -0.57
THBS3-206ENST00000469769 STX1AQ16623 288 aa11.5□□□□□ -0.57
THBS3-206ENST00000469769 BMT2Q1RMZ1 405 aa11.5□□□□□ -0.57
THBS3-206ENST00000469769 DPCR1Q3MIW9 517 aa11.5□□□□□ -0.57
THBS3-206ENST00000469769 FAM26FQ5R3K3 315 aa11.5□□□□□ -0.57
THBS3-206ENST00000469769 MTHFD1LQ6UB35 978 aa11.5□□□□□ -0.57
THBS3-206ENST00000469769 ZNF720Q7Z2F6 126 aa11.5□□□□□ -0.57
THBS3-206ENST00000469769 SLC17A8Q8NDX2 589 aa11.5□□□□□ -0.57
THBS3-206ENST00000469769 LMBR1Q8WVP7 490 aa11.5□□□□□ -0.57
THBS3-206ENST00000469769 CCDC47Q96A33 483 aaKnown RBP11.5□□□□□ -0.57
THBS3-206ENST00000469769 CCDC43Q96MW1 224 aaKnown RBP11.5□□□□□ -0.57
THBS3-206ENST00000469769 BPIFA3Q9BQP9 254 aa11.5□□□□□ -0.57
THBS3-206ENST00000469769 SEZ6LQ9BYH1 1024 aa11.5□□□□□ -0.57
THBS3-206ENST00000469769 EXOC1Q9NV70 894 aa11.5□□□□□ -0.57
THBS3-206ENST00000469769 LARSQ9P2J5 1176 aaKnown RBP11.5□□□□□ -0.57
THBS3-206ENST00000469769 TRPC6Q9Y210 931 aa11.5□□□□□ -0.57
THBS3-206ENST00000469769 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.49□□□□□ -0.57
THBS3-206ENST00000469769 SMIM35A0A1B0GVV1 85 aa11.49□□□□□ -0.57
THBS3-206ENST00000469769 BIN1O00499 593 aa11.49□□□□□ -0.57
THBS3-206ENST00000469769 ASAP2O43150 1006 aa11.49□□□□□ -0.57
THBS3-206ENST00000469769 TBCAO75347 108 aaKnown RBP11.49□□□□□ -0.57
THBS3-206ENST00000469769 FAM13AO94988 1023 aa11.49□□□□□ -0.57
THBS3-206ENST00000469769 SGPL1O95470 568 aa11.49□□□□□ -0.57
THBS3-206ENST00000469769 KRT18P05783 430 aaKnown RBP11.49□□□□□ -0.57
THBS3-206ENST00000469769 IDEP14735 1019 aa11.49□□□□□ -0.57
THBS3-206ENST00000469769 CD44P16070 742 aaKnown RBP11.49□□□□□ -0.57
THBS3-206ENST00000469769 KLRC1P26715 233 aa11.49□□□□□ -0.57
THBS3-206ENST00000469769 MNX1P50219 401 aaPredicted RBP11.49□□□□□ -0.57
THBS3-206ENST00000469769 NCKAP1LP55160 1127 aa11.49□□□□□ -0.57
THBS3-206ENST00000469769 HERC4Q5GLZ8 1057 aaPredicted RBP11.49□□□□□ -0.57
THBS3-206ENST00000469769 TRMT1LQ7Z2T5 733 aaKnown RBP11.49□□□□□ -0.57
THBS3-206ENST00000469769 RPAINQ86UA6 219 aa11.49□□□□□ -0.57
THBS3-206ENST00000469769 GAS2L3Q86XJ1 694 aa11.49□□□□□ -0.57
THBS3-206ENST00000469769 SFR1Q86XK3 245 aa11.49□□□□□ -0.57
THBS3-206ENST00000469769 IFNLR1Q8IU57 520 aaPredicted RBP11.49□□□□□ -0.57
THBS3-206ENST00000469769 ADSSL1Q8N142 457 aa11.49□□□□□ -0.57
THBS3-206ENST00000469769 GUF1Q8N442 669 aaKnown RBP11.49□□□□□ -0.57
THBS3-206ENST00000469769 ZNF507Q8TCN5 953 aa11.49□□□□□ -0.57
THBS3-206ENST00000469769 TCP11Q8WWU5 503 aa11.49□□□□□ -0.57
THBS3-206ENST00000469769 DEFB118Q96PH6 123 aa11.49□□□□□ -0.57
THBS3-206ENST00000469769 NFKBIZQ9BYH8 718 aa11.49□□□□□ -0.57
THBS3-206ENST00000469769 RNF208Q9H0X6 261 aa11.49□□□□□ -0.57
THBS3-206ENST00000469769 GPRC5CQ9NQ84 441 aa11.49□□□□□ -0.57
THBS3-206ENST00000469769 HDAC6Q9UBN7 1215 aa11.49□□□□□ -0.57
THBS3-206ENST00000469769 GTF2IRD1Q9UHL9 959 aa11.49□□□□□ -0.57
THBS3-206ENST00000469769 GDAQ9Y2T3 454 aa11.49□□□□□ -0.57
THBS3-206ENST00000469769 SFI1A8K8P3 1242 aa11.48□□□□□ -0.57
THBS3-206ENST00000469769 EIF3DO15371 548 aaKnown RBP eCLIP11.48□□□□□ -0.57
THBS3-206ENST00000469769 GNAT1P11488 350 aa11.48□□□□□ -0.57
THBS3-206ENST00000469769 GLRA2P23416 452 aa11.48□□□□□ -0.57
THBS3-206ENST00000469769 ERCC5P28715 1186 aaPredicted RBP11.48□□□□□ -0.57
THBS3-206ENST00000469769 PRCPP42785 496 aa11.48□□□□□ -0.57
THBS3-206ENST00000469769 NAMPTP43490 491 aa11.48□□□□□ -0.57
THBS3-206ENST00000469769 GJA8P48165 433 aa11.48□□□□□ -0.57
THBS3-206ENST00000469769 GTF2BQ00403 316 aa11.48□□□□□ -0.57
THBS3-206ENST00000469769 CACNB1Q02641 598 aaPredicted RBP11.48□□□□□ -0.57
THBS3-206ENST00000469769 RAD51AP2Q09MP3 1159 aa11.48□□□□□ -0.57
THBS3-206ENST00000469769 DRP2Q13474 957 aa11.48□□□□□ -0.57
THBS3-206ENST00000469769 ALCAMQ13740 583 aa11.48□□□□□ -0.57
THBS3-206ENST00000469769 MXD4Q14582 209 aaPredicted RBP11.48□□□□□ -0.57
THBS3-206ENST00000469769 NBPF20Q3BBV1 942 aa11.48□□□□□ -0.57
THBS3-206ENST00000469769 FAM102BQ5T8I3 360 aa11.48□□□□□ -0.57
THBS3-206ENST00000469769 EFCAB12Q6NXP0 572 aa11.48□□□□□ -0.57
THBS3-206ENST00000469769 ZNF710Q8N1W2 664 aa11.48□□□□□ -0.57
THBS3-206ENST00000469769 MYCT1Q8N699 235 aa11.48□□□□□ -0.57
THBS3-206ENST00000469769 RETREG2Q8NC44 543 aa11.48□□□□□ -0.57
THBS3-206ENST00000469769 TMEM174Q8WUU8 243 aa11.48□□□□□ -0.57
THBS3-206ENST00000469769 SCFD1Q8WVM8 642 aa11.48□□□□□ -0.57
THBS3-206ENST00000469769 TRAPPC12Q8WVT3 735 aa11.48□□□□□ -0.57
THBS3-206ENST00000469769 BSNDQ8WZ55 320 aa11.48□□□□□ -0.57
THBS3-206ENST00000469769 HPS3Q969F9 1004 aa11.48□□□□□ -0.57
THBS3-206ENST00000469769 TMEM143Q96AN5 459 aa11.48□□□□□ -0.57
THBS3-206ENST00000469769 DHTKD1Q96HY7 919 aaPredicted RBP11.48□□□□□ -0.57
THBS3-206ENST00000469769 MED15Q96RN5 788 aa11.48□□□□□ -0.57
THBS3-206ENST00000469769 CTAGE1Q96RT6 745 aa11.48□□□□□ -0.57
THBS3-206ENST00000469769 FGFBP2Q9BYJ0 223 aa11.48□□□□□ -0.57
THBS3-206ENST00000469769 SETD4Q9NVD3 440 aa11.48□□□□□ -0.57
THBS3-206ENST00000469769 ARHGAP28Q9P2N2 729 aa11.48□□□□□ -0.57
THBS3-206ENST00000469769 SIP14410 1827 aa11.47□□□□□ -0.57
THBS3-206ENST00000469769 UBE4BO95155 1302 aa11.47□□□□□ -0.57
THBS3-206ENST00000469769 A0A1W2PQ45 241 aaPredicted RBP11.47□□□□□ -0.57
THBS3-206ENST00000469769 A0A1W2PQY0 241 aa11.47□□□□□ -0.57
THBS3-206ENST00000469769 RPLP2P05387 115 aaKnown RBP11.47□□□□□ -0.57
THBS3-206ENST00000469769 ABCD1P33897 745 aa11.47□□□□□ -0.57
THBS3-206ENST00000469769 HOXD13P35453 343 aa11.47□□□□□ -0.57
THBS3-206ENST00000469769 NPTX2P47972 431 aa11.47□□□□□ -0.57
THBS3-206ENST00000469769 CDK7P50613 346 aa11.47□□□□□ -0.57
THBS3-206ENST00000469769 CASP5P51878 434 aa11.47□□□□□ -0.57
THBS3-206ENST00000469769 SOX10P56693 466 aa11.47□□□□□ -0.57
THBS3-206ENST00000469769 CDC42EP1Q00587 391 aa11.47□□□□□ -0.57
THBS3-206ENST00000469769 ITGA7Q13683 1181 aa11.47□□□□□ -0.57
THBS3-206ENST00000469769 IQCB1Q15051 598 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms