RNA–Protein interactions for RNA: ENST00000469535.5

CD46-212, Transcript of CD46 molecule, humanhuman

TSL 1 (best)

Gene CD46, Length 7,826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-212ENST00000469535 ADGRF4Q8IZF3 695 aa7.55□□□□□ -1.2
CD46-212ENST00000469535 PPWD1Q96BP3 646 aaKnown RBP7.55□□□□□ -1.2
CD46-212ENST00000469535 RMDN1Q96DB5 314 aa7.55□□□□□ -1.2
CD46-212ENST00000469535 PGBD4Q96DM1 585 aa7.55□□□□□ -1.2
CD46-212ENST00000469535 LSG1Q9H089 658 aaKnown RBP7.55□□□□□ -1.2
CD46-212ENST00000469535 RRAGCQ9HB90 399 aa7.55□□□□□ -1.2
CD46-212ENST00000469535 ENTPD7Q9NQZ7 604 aa7.55□□□□□ -1.2
CD46-212ENST00000469535 PCDHB6Q9Y5E3 794 aa7.55□□□□□ -1.2
CD46-212ENST00000469535 CHD1O14646 1710 aa7.55□□□□□ -1.2
CD46-212ENST00000469535 RPS6KA5O75582 802 aa7.55□□□□□ -1.2
CD46-212ENST00000469535 GTF2H3Q13889 308 aa7.55□□□□□ -1.2
CD46-212ENST00000469535 CAPRIN1Q14444 709 aaKnown RBP7.55□□□□□ -1.2
CD46-212ENST00000469535 DNAJC17Q9NVM6 304 aaKnown RBP7.55□□□□□ -1.2
CD46-212ENST00000469535 GOLGA8QA0A0J9YX86 632 aa7.55□□□□□ -1.2
CD46-212ENST00000469535 GOLGA8OA6NCC3 632 aa7.55□□□□□ -1.2
CD46-212ENST00000469535 GOLGA8NF8WBI6 632 aa7.55□□□□□ -1.2
CD46-212ENST00000469535 ANP32DO95626 131 aa7.55□□□□□ -1.2
CD46-212ENST00000469535 PAN2Q504Q3 1202 aaKnown RBP7.55□□□□□ -1.2
CD46-212ENST00000469535 C9orf131Q5VYM1 1079 aa7.55□□□□□ -1.2
CD46-212ENST00000469535 SAMD7Q7Z3H4 446 aa7.55□□□□□ -1.2
CD46-212ENST00000469535 RNF180Q86T96 592 aa7.55□□□□□ -1.2
CD46-212ENST00000469535 RNF149Q8NC42 400 aa7.55□□□□□ -1.2
CD46-212ENST00000469535 SAAL1Q96ER3 474 aa7.55□□□□□ -1.2
CD46-212ENST00000469535 SH3BP1Q9Y3L3 701 aa7.55□□□□□ -1.2
CD46-212ENST00000469535 EPN1Q9Y6I3 576 aaPredicted RBP7.55□□□□□ -1.2
CD46-212ENST00000469535 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.55□□□□□ -1.21e-6■□□□□ 10.9
CD46-212ENST00000469535 WDR91A4D1P6 747 aa7.54□□□□□ -1.2
CD46-212ENST00000469535 GCLMP48507 274 aa7.54□□□□□ -1.2
CD46-212ENST00000469535 OCRLQ01968 901 aa7.54□□□□□ -1.2
CD46-212ENST00000469535 KRT17Q04695 432 aa7.54□□□□□ -1.2
CD46-212ENST00000469535 MGAT5BQ3V5L5 792 aa7.54□□□□□ -1.2
CD46-212ENST00000469535 ADCK2Q7Z695 626 aa7.54□□□□□ -1.2
CD46-212ENST00000469535 STAG1Q8WVM7 1258 aa7.54□□□□□ -1.2
CD46-212ENST00000469535 ULK4Q96C45 1275 aa7.54□□□□□ -1.2
CD46-212ENST00000469535 DDX50Q9BQ39 737 aaKnown RBP7.54□□□□□ -1.2
CD46-212ENST00000469535 TSPYL2Q9H2G4 693 aaPredicted RBP7.54□□□□□ -1.2
CD46-212ENST00000469535 PPP2R2CQ9Y2T4 447 aa7.54□□□□□ -1.2
CD46-212ENST00000469535 PPP6R2O75170 966 aa7.54□□□□□ -1.2
CD46-212ENST00000469535 INPP5BP32019 993 aa7.54□□□□□ -1.2
CD46-212ENST00000469535 TCP11X2Q5H9J9 407 aa7.54□□□□□ -1.2
CD46-212ENST00000469535 SFR1Q86XK3 245 aa7.54□□□□□ -1.2
CD46-212ENST00000469535 RAB42Q8N4Z0 105 aa7.54□□□□□ -1.2
CD46-212ENST00000469535 AIFM3Q96NN9 605 aa7.54□□□□□ -1.2
CD46-212ENST00000469535 ATP11BQ9Y2G3 1177 aa7.54□□□□□ -1.2
CD46-212ENST00000469535 PHLPP2Q6ZVD8 1323 aa7.54□□□□□ -1.2
CD46-212ENST00000469535 UBE2Q2LH0YL09 131 aa7.54□□□□□ -1.2
CD46-212ENST00000469535 SFNP31947 248 aa7.54□□□□□ -1.2
CD46-212ENST00000469535 CXCR5P32302 372 aa7.54□□□□□ -1.2
CD46-212ENST00000469535 PLTPP55058 493 aa7.54□□□□□ -1.2
CD46-212ENST00000469535 ZNF235Q14590 738 aa7.54□□□□□ -1.2
CD46-212ENST00000469535 COG2Q14746 738 aa7.54□□□□□ -1.2
CD46-212ENST00000469535 ZNF280CQ8ND82 737 aa7.54□□□□□ -1.2
CD46-212ENST00000469535 PRR36Q9H6K5 1346 aa7.54□□□□□ -1.2
CD46-212ENST00000469535 SPECC1L-ADORA2AF8WAN1 911 aa7.54□□□□□ -1.2
CD46-212ENST00000469535 IKBKBO14920 756 aa7.54□□□□□ -1.2
CD46-212ENST00000469535 MT-ND3P03897 115 aa7.54□□□□□ -1.2
CD46-212ENST00000469535 NCF2P19878 526 aaPredicted RBP7.54□□□□□ -1.2
CD46-212ENST00000469535 QARSP47897 775 aaKnown RBP7.54□□□□□ -1.2
CD46-212ENST00000469535 WHAMMP3Q1A5X7 153 aa7.54□□□□□ -1.2
CD46-212ENST00000469535 IER5Q5VY09 327 aa7.54□□□□□ -1.2
CD46-212ENST00000469535 RSBN1LQ6PCB5 846 aaPredicted RBP7.54□□□□□ -1.2
CD46-212ENST00000469535 NCLNQ969V3 563 aa7.54□□□□□ -1.2
CD46-212ENST00000469535 ASNSD1Q9NWL6 643 aa7.54□□□□□ -1.2
CD46-212ENST00000469535 PCSK1NQ9UHG2 260 aa7.54□□□□□ -1.2
CD46-212ENST00000469535 MTMR6Q9Y217 621 aa7.54□□□□□ -1.2
CD46-212ENST00000469535 TNS3Q68CZ2 1445 aa7.54□□□□□ -1.2
CD46-212ENST00000469535 MAP3K4Q9Y6R4 1608 aa7.54□□□□□ -1.2
CD46-212ENST00000469535 GH1P01241 217 aa7.54□□□□□ -1.2
CD46-212ENST00000469535 ZNF853P0CG23 659 aa7.54□□□□□ -1.2
CD46-212ENST00000469535 TCP1P17987 556 aaKnown RBP7.54□□□□□ -1.2
CD46-212ENST00000469535 IFNAR2P48551 515 aa7.54□□□□□ -1.2
CD46-212ENST00000469535 RBL2Q08999 1139 aa7.54□□□□□ -1.2
CD46-212ENST00000469535 GNASQ5JWF2 1037 aa7.54□□□□□ -1.2
CD46-212ENST00000469535 LDHDQ86WU2 507 aa7.54□□□□□ -1.2
CD46-212ENST00000469535 MAP4K1Q92918 833 aa7.54□□□□□ -1.2
CD46-212ENST00000469535 VPS39Q96JC1 886 aa7.54□□□□□ -1.2
CD46-212ENST00000469535 NR1H4Q96RI1 486 aaPredicted RBP7.54□□□□□ -1.2
CD46-212ENST00000469535 NEDD4P46934 1319 aa7.54□□□□□ -1.2
CD46-212ENST00000469535 E9PMD0 336 aa7.54□□□□□ -1.2
CD46-212ENST00000469535 TMCC1O94876 653 aa7.54□□□□□ -1.2
CD46-212ENST00000469535 TAC1P20366 129 aa7.54□□□□□ -1.2
CD46-212ENST00000469535 PSMC5P62195 406 aa7.54□□□□□ -1.2
CD46-212ENST00000469535 MUM1Q2TAK8 710 aa7.54□□□□□ -1.2
CD46-212ENST00000469535 DCUN1D1Q96GG9 259 aa7.54□□□□□ -1.2
CD46-212ENST00000469535 ZNF512Q96ME7 567 aaPredicted RBP7.54□□□□□ -1.2
CD46-212ENST00000469535 GSDMAQ96QA5 445 aa7.54□□□□□ -1.2
CD46-212ENST00000469535 ADAM22Q9P0K1 906 aa7.54□□□□□ -1.2
CD46-212ENST00000469535 MAN1B1Q9UKM7 699 aa7.54□□□□□ -1.2
CD46-212ENST00000469535 AXIN2Q9Y2T1 843 aa7.54□□□□□ -1.2
CD46-212ENST00000469535 PCDHA5Q9Y5H7 936 aa7.54□□□□□ -1.2
CD46-212ENST00000469535 SPATA31A6Q5VVP1 1343 aa7.54□□□□□ -1.2
CD46-212ENST00000469535 PLS3P13797 630 aa7.53□□□□□ -1.2
CD46-212ENST00000469535 HSPA6P17066 643 aa7.53□□□□□ -1.2
CD46-212ENST00000469535 IFNA8P32881 189 aa7.53□□□□□ -1.2
CD46-212ENST00000469535 STAT5BP51692 787 aa7.53□□□□□ -1.2
CD46-212ENST00000469535 PTCH1Q13635 1447 aa7.53□□□□□ -1.2
CD46-212ENST00000469535 GPRC5AQ8NFJ5 357 aa7.53□□□□□ -1.2
CD46-212ENST00000469535 ZNF560Q96MR9 790 aa7.53□□□□□ -1.2
CD46-212ENST00000469535 LXNQ9BS40 222 aa7.53□□□□□ -1.2
CD46-212ENST00000469535 STAP1Q9ULZ2 295 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms