RNA–Protein interactions for RNA: ENST00000468770.1

SNRPD3-205, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 1 (best)

Gene SNRPD3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-205ENST00000468770 FOSBP53539 338 aa8.05□□□□□ -1.12
SNRPD3-205ENST00000468770 FAM189BP81408 668 aa8.05□□□□□ -1.12
SNRPD3-205ENST00000468770 DRP2Q13474 957 aa8.05□□□□□ -1.12
SNRPD3-205ENST00000468770 DSC3Q14574 896 aa8.05□□□□□ -1.12
SNRPD3-205ENST00000468770 EPHA7Q15375 998 aa8.05□□□□□ -1.12
SNRPD3-205ENST00000468770 SAFBQ15424 915 aaKnown RBP eCLIP8.05□□□□□ -1.12
SNRPD3-205ENST00000468770 TCEAL5Q5H9L2 206 aa8.05□□□□□ -1.12
SNRPD3-205ENST00000468770 FAM102BQ5T8I3 360 aa8.05□□□□□ -1.12
SNRPD3-205ENST00000468770 NCAPH2Q6IBW4 605 aa8.05□□□□□ -1.12
SNRPD3-205ENST00000468770 ANO5Q75V66 913 aa8.05□□□□□ -1.12
SNRPD3-205ENST00000468770 OTUD6AQ7L8S5 288 aa8.05□□□□□ -1.12
SNRPD3-205ENST00000468770 RHPN2Q8IUC4 686 aa8.05□□□□□ -1.12
SNRPD3-205ENST00000468770 DIS3L2Q8IYB7 885 aaKnown RBP8.05□□□□□ -1.12
SNRPD3-205ENST00000468770 EXOC8Q8IYI6 725 aa8.05□□□□□ -1.12
SNRPD3-205ENST00000468770 SLC7A3Q8WY07 619 aa8.05□□□□□ -1.12
SNRPD3-205ENST00000468770 P2RX5Q93086 422 aa8.05□□□□□ -1.12
SNRPD3-205ENST00000468770 CEP170P1Q96L14 293 aa8.05□□□□□ -1.12
SNRPD3-205ENST00000468770 NECAB3Q96P71 396 aaPredicted RBP8.05□□□□□ -1.12
SNRPD3-205ENST00000468770 INO80BQ9C086 356 aaPredicted RBP8.05□□□□□ -1.12
SNRPD3-205ENST00000468770 ELAC1Q9H777 363 aaKnown RBP8.05□□□□□ -1.12
SNRPD3-205ENST00000468770 CYP26B1Q9NR63 512 aa8.05□□□□□ -1.12
SNRPD3-205ENST00000468770 AAASQ9NRG9 546 aa8.05□□□□□ -1.12
SNRPD3-205ENST00000468770 TMEM161AQ9NX61 479 aa8.05□□□□□ -1.12
SNRPD3-205ENST00000468770 SUCLA2Q9P2R7 463 aaPredicted RBP8.05□□□□□ -1.12
SNRPD3-205ENST00000468770 VAV3Q9UKW4 847 aa8.05□□□□□ -1.12
SNRPD3-205ENST00000468770 PCDHA12Q9UN75 941 aa8.05□□□□□ -1.12
SNRPD3-205ENST00000468770 PCDHB12Q9Y5F1 795 aa8.05□□□□□ -1.12
SNRPD3-205ENST00000468770 NCOR1O75376 2440 aa8.05□□□□□ -1.12
SNRPD3-205ENST00000468770 COL4A4P53420 1690 aaPredicted RBP8.05□□□□□ -1.12
SNRPD3-205ENST00000468770 COL4A6Q14031 1691 aa8.05□□□□□ -1.12
SNRPD3-205ENST00000468770 TCF20Q9UGU0 1960 aaKnown RBP8.04□□□□□ -1.12
SNRPD3-205ENST00000468770 SPTBN5Q9NRC6 3674 aaKnown RBP8.04□□□□□ -1.12
SNRPD3-205ENST00000468770 A0A087WZ62 844 aa8.04□□□□□ -1.12
SNRPD3-205ENST00000468770 HOXA2O43364 376 aa8.04□□□□□ -1.12
SNRPD3-205ENST00000468770 CSDE1O75534 798 aaKnown RBP8.04□□□□□ -1.12
SNRPD3-205ENST00000468770 CSPG5O95196 566 aa8.04□□□□□ -1.12
SNRPD3-205ENST00000468770 ITGB1P05556 798 aa8.04□□□□□ -1.12
SNRPD3-205ENST00000468770 FGFR1P11362 822 aa8.04□□□□□ -1.12
SNRPD3-205ENST00000468770 ATP2B1P20020 1258 aa8.04□□□□□ -1.12
SNRPD3-205ENST00000468770 FGFR4P22455 802 aa8.04□□□□□ -1.12
SNRPD3-205ENST00000468770 YWHABP31946 246 aaKnown RBP8.04□□□□□ -1.12
SNRPD3-205ENST00000468770 POLGP54098 1239 aaPredicted RBP8.04□□□□□ -1.12
SNRPD3-205ENST00000468770 NPEPPSP55786 919 aa8.04□□□□□ -1.12
SNRPD3-205ENST00000468770 CYP4A11Q02928 519 aa8.04□□□□□ -1.12
SNRPD3-205ENST00000468770 CALCRLQ16602 461 aa8.04□□□□□ -1.12
SNRPD3-205ENST00000468770 LEXMQ3ZCV2 418 aa8.04□□□□□ -1.12
SNRPD3-205ENST00000468770 PLA2G4FQ68DD2 849 aa8.04□□□□□ -1.12
SNRPD3-205ENST00000468770 CCDC83Q8IWF9 413 aa8.04□□□□□ -1.12
SNRPD3-205ENST00000468770 TPH2Q8IWU9 490 aa8.04□□□□□ -1.12
SNRPD3-205ENST00000468770 C4orf19Q8IY42 314 aa8.04□□□□□ -1.12
SNRPD3-205ENST00000468770 ABI1Q8IZP0 508 aa8.04□□□□□ -1.12
SNRPD3-205ENST00000468770 KLHL23Q8NBE8 558 aa8.04□□□□□ -1.12
SNRPD3-205ENST00000468770 RNF169Q8NCN4 708 aa8.04□□□□□ -1.12
SNRPD3-205ENST00000468770 SPPL3Q8TCT6 385 aa8.04□□□□□ -1.12
SNRPD3-205ENST00000468770 MICAL1Q8TDZ2 1067 aa8.04□□□□□ -1.12
SNRPD3-205ENST00000468770 TNFRSF25Q93038 417 aa8.04□□□□□ -1.12
SNRPD3-205ENST00000468770 PPP2R3CQ969Q6 453 aa8.04□□□□□ -1.12
SNRPD3-205ENST00000468770 PABPC5Q96DU9 382 aaKnown RBP8.04□□□□□ -1.12
SNRPD3-205ENST00000468770 DYDC2Q96IM9 177 aa8.04□□□□□ -1.12
SNRPD3-205ENST00000468770 ZSCAN31Q96LW9 406 aaPredicted RBP8.04□□□□□ -1.12
SNRPD3-205ENST00000468770 CEP89Q96ST8 783 aa8.04□□□□□ -1.12
SNRPD3-205ENST00000468770 FDXACB1Q9BRP7 624 aaPredicted RBP8.04□□□□□ -1.12
SNRPD3-205ENST00000468770 LLPHQ9BRT6 129 aaKnown RBP8.04□□□□□ -1.12
SNRPD3-205ENST00000468770 LXNQ9BS40 222 aa8.04□□□□□ -1.12
SNRPD3-205ENST00000468770 IGFLR1Q9H665 355 aa8.04□□□□□ -1.12
SNRPD3-205ENST00000468770 ZSWIM4Q9H7M6 989 aa8.04□□□□□ -1.12
SNRPD3-205ENST00000468770 CHST12Q9NRB3 414 aa8.04□□□□□ -1.12
SNRPD3-205ENST00000468770 TYW1Q9NV66 732 aaKnown RBP8.04□□□□□ -1.12
SNRPD3-205ENST00000468770 CLDND1Q9NY35 253 aa8.04□□□□□ -1.12
SNRPD3-205ENST00000468770 DACT1Q9NYF0 836 aa8.04□□□□□ -1.12
SNRPD3-205ENST00000468770 RGL1Q9NZL6 768 aa8.04□□□□□ -1.12
SNRPD3-205ENST00000468770 PPME1Q9Y570 386 aa8.04□□□□□ -1.12
SNRPD3-205ENST00000468770 MYO7AQ13402 2215 aa8.04□□□□□ -1.12
SNRPD3-205ENST00000468770 BRWD1Q9NSI6 2320 aa8.04□□□□□ -1.12
SNRPD3-205ENST00000468770 XIRP2A4UGR9 3374 aa8.04□□□□□ -1.12
SNRPD3-205ENST00000468770 WDR81Q562E7 1941 aa8.03□□□□□ -1.12
SNRPD3-205ENST00000468770 A0A0U1RQF3 1178 aa8.03□□□□□ -1.12
SNRPD3-205ENST00000468770 H3BQ06 376 aaPredicted RBP8.03□□□□□ -1.12
SNRPD3-205ENST00000468770 NEMFO60524 1076 aa8.03□□□□□ -1.12
SNRPD3-205ENST00000468770 SLITRK3O94933 977 aa8.03□□□□□ -1.12
SNRPD3-205ENST00000468770 EOMESO95936 686 aa8.03□□□□□ -1.12
SNRPD3-205ENST00000468770 SFPQP23246 707 aaKnown RBP eCLIP8.03□□□□□ -1.12
SNRPD3-205ENST00000468770 RFC5P40937 340 aa8.03□□□□□ -1.12
SNRPD3-205ENST00000468770 TXKP42681 527 aa8.03□□□□□ -1.12
SNRPD3-205ENST00000468770 GUCY1B3Q02153 619 aa8.03□□□□□ -1.12
SNRPD3-205ENST00000468770 GNL2Q13823 731 aaKnown RBP8.03□□□□□ -1.12
SNRPD3-205ENST00000468770 CAMK1Q14012 370 aa8.03□□□□□ -1.12
SNRPD3-205ENST00000468770 CTTNQ14247 550 aaKnown RBP8.03□□□□□ -1.12
SNRPD3-205ENST00000468770 CSPP1Q1MSJ5 1256 aa8.03□□□□□ -1.12
SNRPD3-205ENST00000468770 PUS10Q3MIT2 529 aaKnown RBP8.03□□□□□ -1.12
SNRPD3-205ENST00000468770 C8orf34Q49A92 452 aa8.03□□□□□ -1.12
SNRPD3-205ENST00000468770 XKR9Q5GH70 373 aa8.03□□□□□ -1.12
SNRPD3-205ENST00000468770 PTCRAQ6ISU1 281 aaPredicted RBP8.03□□□□□ -1.12
SNRPD3-205ENST00000468770 CATSPER4Q7RTX7 472 aa8.03□□□□□ -1.12
SNRPD3-205ENST00000468770 ZNF410Q86VK4 478 aa8.03□□□□□ -1.12
SNRPD3-205ENST00000468770 ECHDC2Q86YB7 292 aa8.03□□□□□ -1.12
SNRPD3-205ENST00000468770 KSR1Q8IVT5 923 aa8.03□□□□□ -1.12
SNRPD3-205ENST00000468770 THNSL1Q8IYQ7 743 aa8.03□□□□□ -1.12
SNRPD3-205ENST00000468770 ZNF579Q8NAF0 562 aaKnown RBP8.03□□□□□ -1.12
SNRPD3-205ENST00000468770 FAM184AQ8NB25 1140 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms