RNA–Protein interactions for RNA: ENST00000468459.5

COL16A1-208, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 620 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-208ENST00000468459 IGSF22Q8N9C0 903 aa16.49■□□□□ 0.23
COL16A1-208ENST00000468459 ZNF689Q96CS4 500 aaPredicted RBP16.49■□□□□ 0.23
COL16A1-208ENST00000468459 MRPL38Q96DV4 380 aaKnown RBP16.49■□□□□ 0.23
COL16A1-208ENST00000468459 ZNF396Q96N95 335 aaPredicted RBP16.49■□□□□ 0.23
COL16A1-208ENST00000468459 SH2D3AQ9BRG2 576 aa16.49■□□□□ 0.23
COL16A1-208ENST00000468459 FAM49AQ9H0Q0 323 aaPredicted RBP16.49■□□□□ 0.23
COL16A1-208ENST00000468459 BRWD1Q9NSI6 2320 aa16.49■□□□□ 0.23
COL16A1-208ENST00000468459 MICAL3Q7RTP6 2002 aa16.48■□□□□ 0.23
COL16A1-208ENST00000468459 A0A087WWV3 80 aa16.48■□□□□ 0.23
COL16A1-208ENST00000468459 C5orf67F2Z3F1 127 aa16.48■□□□□ 0.23
COL16A1-208ENST00000468459 ZBTB39O15060 712 aa16.48■□□□□ 0.23
COL16A1-208ENST00000468459 MED24O75448 989 aa16.48■□□□□ 0.23
COL16A1-208ENST00000468459 BMP15O95972 392 aa16.48■□□□□ 0.23
COL16A1-208ENST00000468459 SPATA31C1P0DKV0 1188 aa16.48■□□□□ 0.23
COL16A1-208ENST00000468459 QARSP47897 775 aaKnown RBP16.48■□□□□ 0.23
COL16A1-208ENST00000468459 PSMC5P62195 406 aa16.48■□□□□ 0.23
COL16A1-208ENST00000468459 IER5Q5VY09 327 aa16.48■□□□□ 0.23
COL16A1-208ENST00000468459 PLA2G4FQ68DD2 849 aa16.48■□□□□ 0.23
COL16A1-208ENST00000468459 TPH2Q8IWU9 490 aa16.48■□□□□ 0.23
COL16A1-208ENST00000468459 TNPO1Q92973 898 aaKnown RBP16.48■□□□□ 0.23
COL16A1-208ENST00000468459 HSD17B14Q9BPX1 270 aa16.48■□□□□ 0.23
COL16A1-208ENST00000468459 LRWD1Q9UFC0 647 aa16.48■□□□□ 0.23
COL16A1-208ENST00000468459 FBXO2Q9UK22 296 aaPredicted RBP16.48■□□□□ 0.23
COL16A1-208ENST00000468459 CEP131Q9UPN4 1083 aa16.48■□□□□ 0.23
COL16A1-208ENST00000468459 KDM3AQ9Y4C1 1321 aa16.47■□□□□ 0.23
COL16A1-208ENST00000468459 SMIM35A0A1B0GVV1 85 aa16.47■□□□□ 0.23
COL16A1-208ENST00000468459 HBP1O60381 514 aa16.47■□□□□ 0.23
COL16A1-208ENST00000468459 SLITRK3O94933 977 aa16.47■□□□□ 0.23
COL16A1-208ENST00000468459 P4HBP07237 508 aaKnown RBP16.47■□□□□ 0.23
COL16A1-208ENST00000468459 CD52P31358 61 aa16.47■□□□□ 0.23
COL16A1-208ENST00000468459 GPM6BQ13491 265 aa16.47■□□□□ 0.23
COL16A1-208ENST00000468459 COL19A1Q14993 1142 aa16.47■□□□□ 0.23
COL16A1-208ENST00000468459 SLC39A14Q15043 492 aa16.47■□□□□ 0.23
COL16A1-208ENST00000468459 ECM1Q16610 540 aa16.47■□□□□ 0.23
COL16A1-208ENST00000468459 ARL6IP4Q66PJ3 421 aaKnown RBP16.47■□□□□ 0.23
COL16A1-208ENST00000468459 POTEGQ6S5H5 508 aa16.47■□□□□ 0.23
COL16A1-208ENST00000468459 MTHFD1LQ6UB35 978 aa16.47■□□□□ 0.23
COL16A1-208ENST00000468459 LINC00301Q8NCQ3 95 aa16.47■□□□□ 0.23
COL16A1-208ENST00000468459 CLP1Q92989 425 aaKnown RBP16.47■□□□□ 0.23
COL16A1-208ENST00000468459 CLIC6Q96NY7 704 aa16.47■□□□□ 0.23
COL16A1-208ENST00000468459 MMTAG2Q9BU76 263 aaKnown RBP16.47■□□□□ 0.23
COL16A1-208ENST00000468459 UBE2ZQ9H832 354 aaPredicted RBP16.47■□□□□ 0.23
COL16A1-208ENST00000468459 SEPT9Q9UHD8 586 aaPredicted RBP16.47■□□□□ 0.23
COL16A1-208ENST00000468459 TRPV2Q9Y5S1 764 aa16.47■□□□□ 0.23
COL16A1-208ENST00000468459 WDR81Q562E7 1941 aa16.47■□□□□ 0.23
COL16A1-208ENST00000468459 COL4A4P53420 1690 aaPredicted RBP16.46■□□□□ 0.23
COL16A1-208ENST00000468459 DDX11L8A8MPP1 907 aa16.46■□□□□ 0.23
COL16A1-208ENST00000468459 DGKIO75912 1065 aa16.46■□□□□ 0.23
COL16A1-208ENST00000468459 CCT6AP40227 531 aaKnown RBP16.46■□□□□ 0.23
COL16A1-208ENST00000468459 TMEM62Q0P6H9 643 aa16.46■□□□□ 0.23
COL16A1-208ENST00000468459 STK38Q15208 465 aa16.46■□□□□ 0.23
COL16A1-208ENST00000468459 PTPROQ16827 1216 aa16.46■□□□□ 0.23
COL16A1-208ENST00000468459 LEXMQ3ZCV2 418 aa16.46■□□□□ 0.23
COL16A1-208ENST00000468459 XKR3Q5GH77 459 aa16.46■□□□□ 0.23
COL16A1-208ENST00000468459 ANO5Q75V66 913 aa16.46■□□□□ 0.23
COL16A1-208ENST00000468459 CATSPER3Q86XQ3 398 aa16.46■□□□□ 0.23
COL16A1-208ENST00000468459 KIAA0319LQ8IZA0 1049 aa16.46■□□□□ 0.23
COL16A1-208ENST00000468459 NME8Q8N427 588 aa16.46■□□□□ 0.23
COL16A1-208ENST00000468459 FIBCD1Q8N539 461 aa16.46■□□□□ 0.23
COL16A1-208ENST00000468459 ZNF579Q8NAF0 562 aaKnown RBP16.46■□□□□ 0.23
COL16A1-208ENST00000468459 SNX29Q8TEQ0 813 aa16.46■□□□□ 0.23
COL16A1-208ENST00000468459 BBXQ8WY36 941 aaPredicted RBP16.46■□□□□ 0.23
COL16A1-208ENST00000468459 FAM167AQ96KS9 214 aa16.46■□□□□ 0.23
COL16A1-208ENST00000468459 CELF4Q9BZC1 486 aaKnown RBP16.46■□□□□ 0.23
COL16A1-208ENST00000468459 TMX1Q9H3N1 280 aa16.46■□□□□ 0.23
COL16A1-208ENST00000468459 PADI3Q9ULW8 664 aa16.46■□□□□ 0.23
COL16A1-208ENST00000468459 ADGRA3Q8IWK6 1321 aa16.45■□□□□ 0.22
COL16A1-208ENST00000468459 RB1P06400 928 aa16.45■□□□□ 0.22
COL16A1-208ENST00000468459 NCLP19338 710 aaKnown RBP16.45■□□□□ 0.22
COL16A1-208ENST00000468459 KLRC1P26715 233 aa16.45■□□□□ 0.22
COL16A1-208ENST00000468459 BMPR1AP36894 532 aa16.45■□□□□ 0.22
COL16A1-208ENST00000468459 NPEPPSP55786 919 aa16.45■□□□□ 0.22
COL16A1-208ENST00000468459 NUCB2P80303 420 aa16.45■□□□□ 0.22
COL16A1-208ENST00000468459 PDIA5Q14554 519 aa16.45■□□□□ 0.22
COL16A1-208ENST00000468459 MTERF2Q49AM1 385 aa16.45■□□□□ 0.22
COL16A1-208ENST00000468459 SPECC1Q5M775 1068 aa16.45■□□□□ 0.22
COL16A1-208ENST00000468459 C4orf19Q8IY42 314 aa16.45■□□□□ 0.22
COL16A1-208ENST00000468459 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.45■□□□□ 0.22
COL16A1-208ENST00000468459 ERMNQ8TAM6 284 aa16.45■□□□□ 0.22
COL16A1-208ENST00000468459 NEK9Q8TD19 979 aa16.45■□□□□ 0.22
COL16A1-208ENST00000468459 PIGOQ8TEQ8 1089 aa16.45■□□□□ 0.22
COL16A1-208ENST00000468459 POLR3CQ9BUI4 534 aaPredicted RBP16.45■□□□□ 0.22
COL16A1-208ENST00000468459 FTHL17Q9BXU8 183 aa16.45■□□□□ 0.22
COL16A1-208ENST00000468459 RAB34Q9BZG1 259 aa16.45■□□□□ 0.22
COL16A1-208ENST00000468459 CSRNP2Q9H175 543 aa16.45■□□□□ 0.22
COL16A1-208ENST00000468459 ZSWIM4Q9H7M6 989 aa16.45■□□□□ 0.22
COL16A1-208ENST00000468459 MYH9P35579 1960 aaKnown RBP16.45■□□□□ 0.22
COL16A1-208ENST00000468459 COL1A2P08123 1366 aa16.44■□□□□ 0.22
COL16A1-208ENST00000468459 SPTLC2O15270 562 aa16.44■□□□□ 0.22
COL16A1-208ENST00000468459 LYPLA2O95372 231 aa16.44■□□□□ 0.22
COL16A1-208ENST00000468459 C22orf31O95567 290 aa16.44■□□□□ 0.22
COL16A1-208ENST00000468459 YEATS4O95619 227 aa16.44■□□□□ 0.22
COL16A1-208ENST00000468459 YWHABP31946 246 aaKnown RBP16.44■□□□□ 0.22
COL16A1-208ENST00000468459 TARBP2Q15633 366 aaKnown RBP16.44■□□□□ 0.22
COL16A1-208ENST00000468459 ZRSR1Q15695 479 aaKnown RBP16.44■□□□□ 0.22
COL16A1-208ENST00000468459 TIGD5Q53EQ6 642 aa16.44■□□□□ 0.22
COL16A1-208ENST00000468459 ZNF484Q5JVG2 852 aa16.44■□□□□ 0.22
COL16A1-208ENST00000468459 HAUS3Q68CZ6 603 aa16.44■□□□□ 0.22
COL16A1-208ENST00000468459 USP49Q70CQ1 688 aa16.44■□□□□ 0.22
COL16A1-208ENST00000468459 TMEM40Q8WWA1 233 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms