RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 POLGP54098 1239 aaPredicted RBP12.91□□□□□ -0.34
CDHR3-205ENST00000468143 GPM6BQ13491 265 aa12.91□□□□□ -0.34
CDHR3-205ENST00000468143 FAM102BQ5T8I3 360 aa12.91□□□□□ -0.34
CDHR3-205ENST00000468143 MCTP1Q6DN14 999 aa12.91□□□□□ -0.34
CDHR3-205ENST00000468143 SLC24A5Q71RS6 500 aa12.91□□□□□ -0.34
CDHR3-205ENST00000468143 SLC7A3Q8WY07 619 aa12.91□□□□□ -0.34
CDHR3-205ENST00000468143 NLRP4Q96MN2 994 aa12.91□□□□□ -0.34
CDHR3-205ENST00000468143 BACH2Q9BYV9 841 aa12.91□□□□□ -0.34
CDHR3-205ENST00000468143 GCOM2Q9BZD3 368 aaPredicted RBP12.91□□□□□ -0.34
CDHR3-205ENST00000468143 NOL7Q9UMY1 257 aaKnown RBP12.91□□□□□ -0.34
CDHR3-205ENST00000468143 MICAL3Q7RTP6 2002 aa12.91□□□□□ -0.34
CDHR3-205ENST00000468143 LAMA2P24043 3122 aaKnown RBP12.91□□□□□ -0.34
CDHR3-205ENST00000468143 C9IYK1 514 aa12.9□□□□□ -0.34
CDHR3-205ENST00000468143 DLL1O00548 723 aa12.9□□□□□ -0.34
CDHR3-205ENST00000468143 OR52Z1P0C646 297 aa12.9□□□□□ -0.34
CDHR3-205ENST00000468143 SRGAP2CP0DJJ0 459 aa12.9□□□□□ -0.34
CDHR3-205ENST00000468143 FGFR1P11362 822 aa12.9□□□□□ -0.34
CDHR3-205ENST00000468143 ZSCAN20P17040 1043 aaPredicted RBP12.9□□□□□ -0.34
CDHR3-205ENST00000468143 U2AF2P26368 475 aaKnown RBP eCLIP12.9□□□□□ -0.34
CDHR3-205ENST00000468143 CTNNB1P35222 781 aa12.9□□□□□ -0.34
CDHR3-205ENST00000468143 RFC5P40937 340 aa12.9□□□□□ -0.34
CDHR3-205ENST00000468143 MCM2P49736 904 aa12.9□□□□□ -0.34
CDHR3-205ENST00000468143 TOB1P50616 345 aaPredicted RBP12.9□□□□□ -0.34
CDHR3-205ENST00000468143 DSC3Q14574 896 aa12.9□□□□□ -0.34
CDHR3-205ENST00000468143 PIGOQ8TEQ8 1089 aa12.9□□□□□ -0.34
CDHR3-205ENST00000468143 PRPF31Q8WWY3 499 aaKnown RBP12.9□□□□□ -0.34
CDHR3-205ENST00000468143 SAMD11Q96NU1 681 aa12.9□□□□□ -0.34
CDHR3-205ENST00000468143 JPH2Q9BR39 696 aaPredicted RBP12.9□□□□□ -0.34
CDHR3-205ENST00000468143 DHX33Q9H6R0 707 aaKnown RBP12.9□□□□□ -0.34
CDHR3-205ENST00000468143 RC3H2Q9HBD1 1191 aaKnown RBP12.9□□□□□ -0.34
CDHR3-205ENST00000468143 C1orf112Q9NSG2 853 aa12.9□□□□□ -0.34
CDHR3-205ENST00000468143 SMC3Q9UQE7 1217 aa12.9□□□□□ -0.34
CDHR3-205ENST00000468143 PCDHB6Q9Y5E3 794 aa12.9□□□□□ -0.34
CDHR3-205ENST00000468143 MRPL42Q9Y6G3 142 aaKnown RBP12.9□□□□□ -0.34
CDHR3-205ENST00000468143 TBKBP1A7MCY6 615 aa12.89□□□□□ -0.35
CDHR3-205ENST00000468143 H3BNC9 293 aa12.89□□□□□ -0.35
CDHR3-205ENST00000468143 H3BQV1 296 aa12.89□□□□□ -0.35
CDHR3-205ENST00000468143 MED24O75448 989 aa12.89□□□□□ -0.35
CDHR3-205ENST00000468143 CSPG5O95196 566 aa12.89□□□□□ -0.35
CDHR3-205ENST00000468143 LINC00271P0C7V0 271 aa12.89□□□□□ -0.35
CDHR3-205ENST00000468143 SPATA31C1P0DKV0 1188 aa12.89□□□□□ -0.35
CDHR3-205ENST00000468143 BMPR1AP36894 532 aa12.89□□□□□ -0.35
CDHR3-205ENST00000468143 FAM189BP81408 668 aa12.89□□□□□ -0.35
CDHR3-205ENST00000468143 EMC2Q15006 297 aa12.89□□□□□ -0.35
CDHR3-205ENST00000468143 CATSPER3Q86XQ3 398 aa12.89□□□□□ -0.35
CDHR3-205ENST00000468143 ZNF710Q8N1W2 664 aa12.89□□□□□ -0.35
CDHR3-205ENST00000468143 C4orf32Q8N8J7 132 aa12.89□□□□□ -0.35
CDHR3-205ENST00000468143 RNF169Q8NCN4 708 aa12.89□□□□□ -0.35
CDHR3-205ENST00000468143 ATP6V0A4Q9HBG4 840 aa12.89□□□□□ -0.35
CDHR3-205ENST00000468143 KIF3AQ9Y496 699 aa12.89□□□□□ -0.35
CDHR3-205ENST00000468143 CDH23Q9H251 3354 aa12.89□□□□□ -0.35
CDHR3-205ENST00000468143 LYPLA2O95372 231 aa12.88□□□□□ -0.35
CDHR3-205ENST00000468143 TRAPPC10P48553 1259 aa12.88□□□□□ -0.35
CDHR3-205ENST00000468143 CDC42EP1Q00587 391 aa12.88□□□□□ -0.35
CDHR3-205ENST00000468143 LAMTOR4Q0VGL1 99 aa12.88□□□□□ -0.35
CDHR3-205ENST00000468143 PTGDRQ13258 359 aa12.88□□□□□ -0.35
CDHR3-205ENST00000468143 LONRF3Q496Y0 759 aa12.88□□□□□ -0.35
CDHR3-205ENST00000468143 SPOUT1Q5T280 376 aaKnown RBP12.88□□□□□ -0.35
CDHR3-205ENST00000468143 MAEAQ7L5Y9 396 aa12.88□□□□□ -0.35
CDHR3-205ENST00000468143 ZNF410Q86VK4 478 aa12.88□□□□□ -0.35
CDHR3-205ENST00000468143 EXOC8Q8IYI6 725 aa12.88□□□□□ -0.35
CDHR3-205ENST00000468143 CMTR2Q8IYT2 770 aaKnown RBP12.88□□□□□ -0.35
CDHR3-205ENST00000468143 IL27Q8NEV9 243 aa12.88□□□□□ -0.35
CDHR3-205ENST00000468143 NEK9Q8TD19 979 aa12.88□□□□□ -0.35
CDHR3-205ENST00000468143 PSPC1Q8WXF1 523 aaKnown RBP12.88□□□□□ -0.35
CDHR3-205ENST00000468143 MTRQ99707 1265 aa12.88□□□□□ -0.35
CDHR3-205ENST00000468143 IFT122Q9HBG6 1241 aa12.88□□□□□ -0.35
CDHR3-205ENST00000468143 XPNPEP1Q9NQW7 623 aa12.88□□□□□ -0.35
CDHR3-205ENST00000468143 TMEM161AQ9NX61 479 aa12.88□□□□□ -0.35
CDHR3-205ENST00000468143 LMCD1Q9NZU5 365 aa12.88□□□□□ -0.35
CDHR3-205ENST00000468143 HCSTQ9UBK5 93 aa12.88□□□□□ -0.35
CDHR3-205ENST00000468143 COL4A3BPQ9Y5P4 624 aa12.88□□□□□ -0.35
CDHR3-205ENST00000468143 MYH9P35579 1960 aaKnown RBP12.88□□□□□ -0.35
CDHR3-205ENST00000468143 GRM6O15303 877 aa12.87□□□□□ -0.35
CDHR3-205ENST00000468143 SFPQP23246 707 aaKnown RBP eCLIP12.87□□□□□ -0.35
CDHR3-205ENST00000468143 RARRES1P49788 294 aa12.87□□□□□ -0.35
CDHR3-205ENST00000468143 TFF2Q03403 129 aa12.87□□□□□ -0.35
CDHR3-205ENST00000468143 ORC2Q13416 577 aaPredicted RBP12.87□□□□□ -0.35
CDHR3-205ENST00000468143 LARP1BQ659C4 914 aaKnown RBP12.87□□□□□ -0.35
CDHR3-205ENST00000468143 CATSPER4Q7RTX7 472 aa12.87□□□□□ -0.35
CDHR3-205ENST00000468143 FERMT3Q86UX7 667 aa12.87□□□□□ -0.35
CDHR3-205ENST00000468143 ECHDC2Q86YB7 292 aa12.87□□□□□ -0.35
CDHR3-205ENST00000468143 TCP11Q8WWU5 503 aa12.87□□□□□ -0.35
CDHR3-205ENST00000468143 CLP1Q92989 425 aaKnown RBP12.87□□□□□ -0.35
CDHR3-205ENST00000468143 CCDC43Q96MW1 224 aaKnown RBP12.87□□□□□ -0.35
CDHR3-205ENST00000468143 COL25A1Q9BXS0 654 aaPredicted RBP12.87□□□□□ -0.35
CDHR3-205ENST00000468143 INO80BQ9C086 356 aaPredicted RBP12.87□□□□□ -0.35
CDHR3-205ENST00000468143 TUFT1Q9NNX1 390 aa12.87□□□□□ -0.35
CDHR3-205ENST00000468143 ALG13Q9NP73 1137 aaKnown RBP12.87□□□□□ -0.35
CDHR3-205ENST00000468143 ANKEF1Q9NU02 776 aa12.87□□□□□ -0.35
CDHR3-205ENST00000468143 TYW1Q9NV66 732 aaKnown RBP12.87□□□□□ -0.35
CDHR3-205ENST00000468143 THEGQ9P2T0 379 aa12.87□□□□□ -0.35
CDHR3-205ENST00000468143 PPME1Q9Y570 386 aa12.87□□□□□ -0.35
CDHR3-205ENST00000468143 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.87□□□□□ -0.35
CDHR3-205ENST00000468143 EVPLQ92817 2033 aa12.87□□□□□ -0.35
CDHR3-205ENST00000468143 C5orf67F2Z3F1 127 aa12.86□□□□□ -0.35
CDHR3-205ENST00000468143 USO1O60763 962 aaKnown RBP12.86□□□□□ -0.35
CDHR3-205ENST00000468143 RB1P06400 928 aa12.86□□□□□ -0.35
CDHR3-205ENST00000468143 IL17AQ16552 155 aa12.86□□□□□ -0.35
CDHR3-205ENST00000468143 ECM1Q16610 540 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms