RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 PER2O15055 1255 aa23.75■■□□□ 1.39
COL9A3-207ENST00000467819 TDP2O95551 362 aa23.75■■□□□ 1.39
COL9A3-207ENST00000467819 ZSCAN20P17040 1043 aaPredicted RBP23.75■■□□□ 1.39
COL9A3-207ENST00000467819 EIF4BP23588 611 aaKnown RBP23.75■■□□□ 1.39
COL9A3-207ENST00000467819 GPC3P51654 580 aa23.75■■□□□ 1.39
COL9A3-207ENST00000467819 TBC1D8BQ0IIM8 1120 aa23.75■■□□□ 1.39
COL9A3-207ENST00000467819 STK3Q13188 491 aa23.75■■□□□ 1.39
COL9A3-207ENST00000467819 MIER3Q7Z3K6 550 aa23.75■■□□□ 1.39
COL9A3-207ENST00000467819 C22orf23Q9BZE7 217 aa23.75■■□□□ 1.39
COL9A3-207ENST00000467819 PSMD10O75832 226 aa23.74■■□□□ 1.39
COL9A3-207ENST00000467819 DEXIO95424 95 aa23.74■■□□□ 1.39
COL9A3-207ENST00000467819 EYA4O95677 639 aa23.74■■□□□ 1.39
COL9A3-207ENST00000467819 LAG3P18627 525 aa23.74■■□□□ 1.39
COL9A3-207ENST00000467819 FGFR4P22455 802 aa23.74■■□□□ 1.39
COL9A3-207ENST00000467819 ERVFC1P60507 584 aa23.74■■□□□ 1.39
COL9A3-207ENST00000467819 Q4G0T1 1027 aa23.74■■□□□ 1.39
COL9A3-207ENST00000467819 BLIDQ8IZY5 108 aa23.74■■□□□ 1.39
COL9A3-207ENST00000467819 RNF169Q8NCN4 708 aa23.74■■□□□ 1.39
COL9A3-207ENST00000467819 NLRP7Q8WX94 980 aa23.74■■□□□ 1.39
COL9A3-207ENST00000467819 TMEM117Q9H0C3 514 aa23.74■■□□□ 1.39
COL9A3-207ENST00000467819 RNF19AQ9NV58 838 aa23.74■■□□□ 1.39
COL9A3-207ENST00000467819 SEPT9Q9UHD8 586 aaPredicted RBP23.74■■□□□ 1.39
COL9A3-207ENST00000467819 RBM10P98175 930 aaKnown RBP23.73■■□□□ 1.39
COL9A3-207ENST00000467819 COASYQ13057 564 aa23.73■■□□□ 1.39
COL9A3-207ENST00000467819 MTERF2Q49AM1 385 aa23.73■■□□□ 1.39
COL9A3-207ENST00000467819 ECHDC2Q86YB7 292 aa23.73■■□□□ 1.39
COL9A3-207ENST00000467819 ABI1Q8IZP0 508 aa23.73■■□□□ 1.39
COL9A3-207ENST00000467819 SMRP1Q8NCR6 262 aa23.73■■□□□ 1.39
COL9A3-207ENST00000467819 ZNF274Q96GC6 653 aaPredicted RBP23.73■■□□□ 1.39
COL9A3-207ENST00000467819 AIFM3Q96NN9 605 aa23.73■■□□□ 1.39
COL9A3-207ENST00000467819 CASD1Q96PB1 797 aa23.73■■□□□ 1.39
COL9A3-207ENST00000467819 MUTYHQ9UIF7 546 aa23.73■■□□□ 1.39
COL9A3-207ENST00000467819 TMEM150BA6NC51 233 aa23.72■■□□□ 1.39
COL9A3-207ENST00000467819 HOXA2O43364 376 aa23.72■■□□□ 1.39
COL9A3-207ENST00000467819 DARSP14868 501 aaKnown RBP23.72■■□□□ 1.39
COL9A3-207ENST00000467819 DRP2Q13474 957 aa23.72■■□□□ 1.39
COL9A3-207ENST00000467819 PLPP4Q5VZY2 271 aa23.72■■□□□ 1.39
COL9A3-207ENST00000467819 LRRC55Q6ZSA7 311 aa23.72■■□□□ 1.39
COL9A3-207ENST00000467819 RNF135Q8IUD6 432 aa23.72■■□□□ 1.39
COL9A3-207ENST00000467819 ZNF710Q8N1W2 664 aa23.72■■□□□ 1.39
COL9A3-207ENST00000467819 RDM1Q8NG50 284 aa23.72■■□□□ 1.39
COL9A3-207ENST00000467819 SH2D3AQ9BRG2 576 aa23.72■■□□□ 1.39
COL9A3-207ENST00000467819 M0R2N6 131 aa23.71■■□□□ 1.39
COL9A3-207ENST00000467819 EPB41L2O43491 1005 aaKnown RBP23.71■■□□□ 1.39
COL9A3-207ENST00000467819 CSDE1O75534 798 aaKnown RBP23.71■■□□□ 1.39
COL9A3-207ENST00000467819 PBX3P40426 434 aa23.71■■□□□ 1.39
COL9A3-207ENST00000467819 TARBP2Q15633 366 aaKnown RBP23.71■■□□□ 1.39
COL9A3-207ENST00000467819 CPLX2Q6PUV4 134 aaKnown RBP23.71■■□□□ 1.39
COL9A3-207ENST00000467819 LRRC43Q8N309 656 aa23.71■■□□□ 1.39
COL9A3-207ENST00000467819 DAGLBQ8NCG7 672 aa23.71■■□□□ 1.39
COL9A3-207ENST00000467819 USP15Q9Y4E8 981 aaPredicted RBP23.71■■□□□ 1.39
COL9A3-207ENST00000467819 TECTAO75443 2155 aa23.7■■□□□ 1.38
COL9A3-207ENST00000467819 CYP3A7-CYP3A51PA0A087WV96 503 aa23.7■■□□□ 1.38
COL9A3-207ENST00000467819 FSCN2O14926 492 aa23.7■■□□□ 1.38
COL9A3-207ENST00000467819 CYP3A7P24462 503 aa23.7■■□□□ 1.38
COL9A3-207ENST00000467819 NONOQ15233 471 aaKnown RBP eCLIP23.7■■□□□ 1.38
COL9A3-207ENST00000467819 NPY5RQ15761 445 aa23.7■■□□□ 1.38
COL9A3-207ENST00000467819 DUSP6Q16828 381 aa23.7■■□□□ 1.38
COL9A3-207ENST00000467819 XKR3Q5GH77 459 aa23.7■■□□□ 1.38
COL9A3-207ENST00000467819 KCNT2Q6UVM3 1135 aa23.7■■□□□ 1.38
COL9A3-207ENST00000467819 VN1R2Q8NFZ6 395 aa23.7■■□□□ 1.38
COL9A3-207ENST00000467819 ETNPPLQ8TBG4 499 aa23.7■■□□□ 1.38
COL9A3-207ENST00000467819 MRPS27Q92552 414 aaKnown RBP23.7■■□□□ 1.38
COL9A3-207ENST00000467819 ZNF558Q96NG5 402 aa23.7■■□□□ 1.38
COL9A3-207ENST00000467819 TM6SF1Q9BZW5 370 aa23.7■■□□□ 1.38
COL9A3-207ENST00000467819 ENTPD7Q9NQZ7 604 aa23.7■■□□□ 1.38
COL9A3-207ENST00000467819 INF2Q27J81 1249 aa23.69■■□□□ 1.38
COL9A3-207ENST00000467819 HERC4Q5GLZ8 1057 aaPredicted RBP23.69■■□□□ 1.38
COL9A3-207ENST00000467819 CLLU1OSQ5K130 101 aa23.69■■□□□ 1.38
COL9A3-207ENST00000467819 PDE12Q6L8Q7 609 aaKnown RBP23.69■■□□□ 1.38
COL9A3-207ENST00000467819 B3GNT9Q6UX72 402 aa23.69■■□□□ 1.38
COL9A3-207ENST00000467819 CDCA3Q99618 268 aaPredicted RBP23.69■■□□□ 1.38
COL9A3-207ENST00000467819 TCF25Q9BQ70 676 aa23.69■■□□□ 1.38
COL9A3-207ENST00000467819 NIFKQ9BYG3 293 aaKnown RBP23.69■■□□□ 1.38
COL9A3-207ENST00000467819 PDRG1Q9NUG6 133 aa23.69■■□□□ 1.38
COL9A3-207ENST00000467819 DDX25Q9UHL0 483 aaKnown RBP23.69■■□□□ 1.38
COL9A3-207ENST00000467819 PUF60Q9UHX1 559 aaKnown RBP23.69■■□□□ 1.38
COL9A3-207ENST00000467819 KCNJ14Q9UNX9 436 aa23.69■■□□□ 1.38
COL9A3-207ENST00000467819 LZTS1Q9Y250 596 aa23.69■■□□□ 1.38
COL9A3-207ENST00000467819 ZNF318Q5VUA4 2279 aa23.68■■□□□ 1.38
COL9A3-207ENST00000467819 DDX11L8A8MPP1 907 aa23.68■■□□□ 1.38
COL9A3-207ENST00000467819 STBD1O95210 358 aa23.68■■□□□ 1.38
COL9A3-207ENST00000467819 PLCB3Q01970 1234 aa23.68■■□□□ 1.38
COL9A3-207ENST00000467819 GALNT17Q6IS24 598 aa23.68■■□□□ 1.38
COL9A3-207ENST00000467819 MOXD1Q6UVY6 613 aa23.68■■□□□ 1.38
COL9A3-207ENST00000467819 HELQQ8TDG4 1101 aa23.68■■□□□ 1.38
COL9A3-207ENST00000467819 MBOAT7Q96N66 472 aa23.68■■□□□ 1.38
COL9A3-207ENST00000467819 GCOM2Q9BZD3 368 aaPredicted RBP23.68■■□□□ 1.38
COL9A3-207ENST00000467819 A0A087WZ62 844 aa23.67■■□□□ 1.38
COL9A3-207ENST00000467819 A0A0U1RQF3 1178 aa23.67■■□□□ 1.38
COL9A3-207ENST00000467819 FSD2A1L4K1 749 aa23.67■■□□□ 1.38
COL9A3-207ENST00000467819 SLC37A4O43826 429 aa23.67■■□□□ 1.38
COL9A3-207ENST00000467819 ATF7P17544 494 aaPredicted RBP23.67■■□□□ 1.38
COL9A3-207ENST00000467819 HOXD11P31277 338 aaPredicted RBP23.67■■□□□ 1.38
COL9A3-207ENST00000467819 PPM1AP35813 382 aa23.67■■□□□ 1.38
COL9A3-207ENST00000467819 DNM2P50570 870 aa23.67■■□□□ 1.38
COL9A3-207ENST00000467819 LETM2Q2VYF4 491 aa23.67■■□□□ 1.38
COL9A3-207ENST00000467819 KRT25Q7Z3Z0 450 aa23.67■■□□□ 1.38
COL9A3-207ENST00000467819 CEP89Q96ST8 783 aa23.67■■□□□ 1.38
COL9A3-207ENST00000467819 FDXACB1Q9BRP7 624 aaPredicted RBP23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms