RNA–Protein interactions for RNA: ENST00000467514.1

PRPF3-203, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 3

Gene PRPF3, Length 1,097 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-203ENST00000467514 SP4Q02446 784 aa12.36□□□□□ -0.43
PRPF3-203ENST00000467514 PTGDRQ13258 359 aa12.36□□□□□ -0.43
PRPF3-203ENST00000467514 IL17AQ16552 155 aa12.36□□□□□ -0.43
PRPF3-203ENST00000467514 UBE2SQ16763 222 aa12.36□□□□□ -0.43
PRPF3-203ENST00000467514 PAN2Q504Q3 1202 aaKnown RBP12.36□□□□□ -0.43
PRPF3-203ENST00000467514 UTP14CQ5TAP6 766 aaKnown RBP12.36□□□□□ -0.43
PRPF3-203ENST00000467514 MCTP2Q6DN12 878 aa12.36□□□□□ -0.43
PRPF3-203ENST00000467514 NEK8Q86SG6 692 aa12.36□□□□□ -0.43
PRPF3-203ENST00000467514 SMRP1Q8NCR6 262 aa12.36□□□□□ -0.43
PRPF3-203ENST00000467514 TBCKQ8TEA7 893 aa12.36□□□□□ -0.43
PRPF3-203ENST00000467514 C16orf70Q9BSU1 422 aa12.36□□□□□ -0.43
PRPF3-203ENST00000467514 PHF7Q9BWX1 381 aaPredicted RBP12.36□□□□□ -0.43
PRPF3-203ENST00000467514 KIAA1671Q9BY89 1806 aa12.36□□□□□ -0.43
PRPF3-203ENST00000467514 CACNA1AO00555 2505 aa12.35□□□□□ -0.43
PRPF3-203ENST00000467514 LETM1O95202 739 aaPredicted RBP12.35□□□□□ -0.43
PRPF3-203ENST00000467514 EYA4O95677 639 aa12.35□□□□□ -0.43
PRPF3-203ENST00000467514 HOXD8P13378 290 aaPredicted RBP12.35□□□□□ -0.43
PRPF3-203ENST00000467514 PFKFB1P16118 471 aa12.35□□□□□ -0.43
PRPF3-203ENST00000467514 MCM7P33993 719 aa12.35□□□□□ -0.43
PRPF3-203ENST00000467514 PRPHP41219 470 aa12.35□□□□□ -0.43
PRPF3-203ENST00000467514 AP3B2Q13367 1082 aa12.35□□□□□ -0.43
PRPF3-203ENST00000467514 GNPTABQ3T906 1256 aa12.35□□□□□ -0.43
PRPF3-203ENST00000467514 ARL6IP4Q66PJ3 421 aaKnown RBP12.35□□□□□ -0.43
PRPF3-203ENST00000467514 PPP4R3AQ6IN85 833 aa12.35□□□□□ -0.43
PRPF3-203ENST00000467514 USP17L6PQ6QN14 398 aa12.35□□□□□ -0.43
PRPF3-203ENST00000467514 CCDC73Q6ZRK6 1079 aa12.35□□□□□ -0.43
PRPF3-203ENST00000467514 ADGRD2Q7Z7M1 963 aa12.35□□□□□ -0.43
PRPF3-203ENST00000467514 EFHBQ8N7U6 833 aa12.35□□□□□ -0.43
PRPF3-203ENST00000467514 CLP1Q92989 425 aaKnown RBP12.35□□□□□ -0.43
PRPF3-203ENST00000467514 ZFP91Q96JP5 570 aaPredicted RBP12.35□□□□□ -0.43
PRPF3-203ENST00000467514 MSLNLQ96KJ4 702 aa12.35□□□□□ -0.43
PRPF3-203ENST00000467514 MBOAT7Q96N66 472 aa12.35□□□□□ -0.43
PRPF3-203ENST00000467514 PDCD2LQ9BRP1 358 aa12.35□□□□□ -0.43
PRPF3-203ENST00000467514 FUCA2Q9BTY2 467 aa12.35□□□□□ -0.43
PRPF3-203ENST00000467514 TMEM60Q9H2L4 133 aa12.35□□□□□ -0.43
PRPF3-203ENST00000467514 TLE6Q9H808 572 aa12.35□□□□□ -0.43
PRPF3-203ENST00000467514 PLAGL2Q9UPG8 496 aa12.35□□□□□ -0.43
PRPF3-203ENST00000467514 DOCK5Q9H7D0 1870 aa12.35□□□□□ -0.43
PRPF3-203ENST00000467514 PTPRZ1P23471 2315 aaPredicted RBP12.34□□□□□ -0.43
PRPF3-203ENST00000467514 CYP3A7-CYP3A51PA0A087WV96 503 aa12.34□□□□□ -0.43
PRPF3-203ENST00000467514 A0A1B0GVL5 298 aa12.34□□□□□ -0.43
PRPF3-203ENST00000467514 SYCE3A1L190 88 aa12.34□□□□□ -0.43
PRPF3-203ENST00000467514 LAD1O00515 517 aa12.34□□□□□ -0.43
PRPF3-203ENST00000467514 FOSP01100 380 aaPredicted RBP12.34□□□□□ -0.43
PRPF3-203ENST00000467514 TGFB3P10600 412 aa12.34□□□□□ -0.43
PRPF3-203ENST00000467514 CYP3A7P24462 503 aa12.34□□□□□ -0.43
PRPF3-203ENST00000467514 HOXA13P31271 388 aaPredicted RBP12.34□□□□□ -0.43
PRPF3-203ENST00000467514 COASYQ13057 564 aa12.34□□□□□ -0.43
PRPF3-203ENST00000467514 PGM5Q15124 567 aa12.34□□□□□ -0.43
PRPF3-203ENST00000467514 TPRNQ4KMQ1 711 aa12.34□□□□□ -0.43
PRPF3-203ENST00000467514 LRSAM1Q6UWE0 723 aa12.34□□□□□ -0.43
PRPF3-203ENST00000467514 FCHSD1Q86WN1 690 aa12.34□□□□□ -0.43
PRPF3-203ENST00000467514 POF1BQ8WVV4 589 aa12.34□□□□□ -0.43
PRPF3-203ENST00000467514 P2RX5Q93086 422 aa12.34□□□□□ -0.43
PRPF3-203ENST00000467514 ANO3Q9BYT9 981 aa12.34□□□□□ -0.43
PRPF3-203ENST00000467514 OSBPL7Q9BZF2 842 aa12.34□□□□□ -0.43
PRPF3-203ENST00000467514 CSRNP2Q9H175 543 aa12.34□□□□□ -0.43
PRPF3-203ENST00000467514 NUP62CLQ9H1M0 184 aa12.34□□□□□ -0.43
PRPF3-203ENST00000467514 LRFN2Q9ULH4 789 aa12.34□□□□□ -0.43
PRPF3-203ENST00000467514 ITGB1P05556 798 aa12.33□□□□□ -0.44
PRPF3-203ENST00000467514 STAG3L1P0CL83 205 aa12.33□□□□□ -0.44
PRPF3-203ENST00000467514 ICAM3P32942 547 aa12.33□□□□□ -0.44
PRPF3-203ENST00000467514 SREBF1P36956 1147 aa12.33□□□□□ -0.44
PRPF3-203ENST00000467514 ID4P47928 161 aa12.33□□□□□ -0.44
PRPF3-203ENST00000467514 HSD17B4P51659 736 aa12.33□□□□□ -0.44
PRPF3-203ENST00000467514 NEDD9Q14511 834 aa12.33□□□□□ -0.44
PRPF3-203ENST00000467514 PTPN21Q16825 1174 aa12.33□□□□□ -0.44
PRPF3-203ENST00000467514 LETM2Q2VYF4 491 aa12.33□□□□□ -0.44
PRPF3-203ENST00000467514 NAALADL2Q58DX5 795 aa12.33□□□□□ -0.44
PRPF3-203ENST00000467514 USP49Q70CQ1 688 aa12.33□□□□□ -0.44
PRPF3-203ENST00000467514 CYFIP1Q7L576 1253 aa12.33□□□□□ -0.44
PRPF3-203ENST00000467514 ERMP1Q7Z2K6 904 aa12.33□□□□□ -0.44
PRPF3-203ENST00000467514 TRIM50Q86XT4 487 aa12.33□□□□□ -0.44
PRPF3-203ENST00000467514 KLHL23Q8NBE8 558 aa12.33□□□□□ -0.44
PRPF3-203ENST00000467514 LMBR1Q8WVP7 490 aa12.33□□□□□ -0.44
PRPF3-203ENST00000467514 TIGD1Q96MW7 591 aa12.33□□□□□ -0.44
PRPF3-203ENST00000467514 MTMR9Q96QG7 549 aa12.33□□□□□ -0.44
PRPF3-203ENST00000467514 MFSD1Q9H3U5 465 aa12.33□□□□□ -0.44
PRPF3-203ENST00000467514 RNF216Q9NWF9 866 aaPredicted RBP12.33□□□□□ -0.44
PRPF3-203ENST00000467514 CLEC1BQ9P126 229 aa12.33□□□□□ -0.44
PRPF3-203ENST00000467514 TRPC6Q9Y210 931 aa12.33□□□□□ -0.44
PRPF3-203ENST00000467514 MRPL42Q9Y6G3 142 aaKnown RBP12.33□□□□□ -0.44
PRPF3-203ENST00000467514 PLXNA3P51805 1871 aa12.33□□□□□ -0.44
PRPF3-203ENST00000467514 CACNA1HO95180 2353 aa12.33□□□□□ -0.44
PRPF3-203ENST00000467514 PLXNA4Q9HCM2 1894 aa12.32□□□□□ -0.44
PRPF3-203ENST00000467514 M0QZ92 97 aa12.32□□□□□ -0.44
PRPF3-203ENST00000467514 PER2O15055 1255 aa12.32□□□□□ -0.44
PRPF3-203ENST00000467514 GALR2O43603 387 aaPredicted RBP12.32□□□□□ -0.44
PRPF3-203ENST00000467514 ZNF202O95125 648 aa12.32□□□□□ -0.44
PRPF3-203ENST00000467514 GCFC2P16383 781 aaKnown RBP12.32□□□□□ -0.44
PRPF3-203ENST00000467514 LONP1P36776 959 aaKnown RBP12.32□□□□□ -0.44
PRPF3-203ENST00000467514 USP11P51784 963 aa12.32□□□□□ -0.44
PRPF3-203ENST00000467514 SP2Q02086 613 aa12.32□□□□□ -0.44
PRPF3-203ENST00000467514 CBX2Q14781 532 aaPredicted RBP12.32□□□□□ -0.44
PRPF3-203ENST00000467514 TAF2Q6P1X5 1199 aa12.32□□□□□ -0.44
PRPF3-203ENST00000467514 MOXD1Q6UVY6 613 aa12.32□□□□□ -0.44
PRPF3-203ENST00000467514 ASCL5Q7RTU5 278 aa12.32□□□□□ -0.44
PRPF3-203ENST00000467514 ELOA2Q8IYF1 753 aaPredicted RBP12.32□□□□□ -0.44
PRPF3-203ENST00000467514 CMTR2Q8IYT2 770 aaKnown RBP12.32□□□□□ -0.44
PRPF3-203ENST00000467514 IL31RAQ8NI17 732 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms