RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 FAM43BQ6ZT52 329 aaPredicted RBP12.3□□□□□ -0.44
MSH5-212ENST00000467319 USP49Q70CQ1 688 aa12.3□□□□□ -0.44
MSH5-212ENST00000467319 FAM228AQ86W67 206 aa12.3□□□□□ -0.44
MSH5-212ENST00000467319 MCPH1Q8NEM0 835 aa12.3□□□□□ -0.44
MSH5-212ENST00000467319 KCNG4Q8TDN1 519 aa12.3□□□□□ -0.44
MSH5-212ENST00000467319 TCP11Q8WWU5 503 aa12.3□□□□□ -0.44
MSH5-212ENST00000467319 PRPF31Q8WWY3 499 aaKnown RBP12.3□□□□□ -0.44
MSH5-212ENST00000467319 PSPC1Q8WXF1 523 aaKnown RBP12.3□□□□□ -0.44
MSH5-212ENST00000467319 LINC01599Q8WXQ3 324 aa12.3□□□□□ -0.44
MSH5-212ENST00000467319 SEPT8Q92599 483 aa12.3□□□□□ -0.44
MSH5-212ENST00000467319 SYMPKQ92797 1274 aaKnown RBP12.3□□□□□ -0.44
MSH5-212ENST00000467319 TMEM143Q96AN5 459 aa12.3□□□□□ -0.44
MSH5-212ENST00000467319 CCDC43Q96MW1 224 aaKnown RBP12.3□□□□□ -0.44
MSH5-212ENST00000467319 CLIC6Q96NY7 704 aa12.3□□□□□ -0.44
MSH5-212ENST00000467319 OSMRQ99650 979 aa12.3□□□□□ -0.44
MSH5-212ENST00000467319 MTRQ99707 1265 aa12.3□□□□□ -0.44
MSH5-212ENST00000467319 NT5C3AQ9H0P0 336 aa12.3□□□□□ -0.44
MSH5-212ENST00000467319 MTIF3Q9H2K0 278 aaKnown RBP12.3□□□□□ -0.44
MSH5-212ENST00000467319 BHMT2Q9H2M3 363 aa12.3□□□□□ -0.44
MSH5-212ENST00000467319 ERVK-5Q9HDB9 667 aa12.3□□□□□ -0.44
MSH5-212ENST00000467319 BMP2KQ9NSY1 1161 aaPredicted RBP12.3□□□□□ -0.44
MSH5-212ENST00000467319 COL4A3BPQ9Y5P4 624 aa12.3□□□□□ -0.44
MSH5-212ENST00000467319 GBF1Q92538 1859 aa12.29□□□□□ -0.44
MSH5-212ENST00000467319 ARHGEF35A5YM69 484 aa12.29□□□□□ -0.44
MSH5-212ENST00000467319 E9PMD0 336 aa12.29□□□□□ -0.44
MSH5-212ENST00000467319 SOX1O00570 391 aaPredicted RBP12.29□□□□□ -0.44
MSH5-212ENST00000467319 DARSP14868 501 aaKnown RBP12.29□□□□□ -0.44
MSH5-212ENST00000467319 CYP11B2P19099 503 aa12.29□□□□□ -0.44
MSH5-212ENST00000467319 PLCG1P19174 1290 aa12.29□□□□□ -0.44
MSH5-212ENST00000467319 ARL2P36404 184 aa12.29□□□□□ -0.44
MSH5-212ENST00000467319 ANP32AP39687 249 aaKnown RBP12.29□□□□□ -0.44
MSH5-212ENST00000467319 UBA7P41226 1012 aa12.29□□□□□ -0.44
MSH5-212ENST00000467319 CDC42EP1Q00587 391 aa12.29□□□□□ -0.44
MSH5-212ENST00000467319 LAMTOR4Q0VGL1 99 aa12.29□□□□□ -0.44
MSH5-212ENST00000467319 PAK2Q13177 524 aa12.29□□□□□ -0.44
MSH5-212ENST00000467319 AXDND1Q5T1B0 1012 aaPredicted RBP12.29□□□□□ -0.44
MSH5-212ENST00000467319 FAM109BQ6ICB4 259 aaPredicted RBP12.29□□□□□ -0.44
MSH5-212ENST00000467319 PADI6Q6TGC4 694 aa12.29□□□□□ -0.44
MSH5-212ENST00000467319 IFNLR1Q8IU57 520 aaPredicted RBP12.29□□□□□ -0.44
MSH5-212ENST00000467319 ASAP3Q8TDY4 903 aa12.29□□□□□ -0.44
MSH5-212ENST00000467319 CHAMP1Q96JM3 812 aa12.29□□□□□ -0.44
MSH5-212ENST00000467319 PPP1R16BQ96T49 567 aa12.29□□□□□ -0.44
MSH5-212ENST00000467319 RUSC1Q9BVN2 902 aa12.29□□□□□ -0.44
MSH5-212ENST00000467319 TMX1Q9H3N1 280 aa12.29□□□□□ -0.44
MSH5-212ENST00000467319 IFT122Q9HBG6 1241 aa12.29□□□□□ -0.44
MSH5-212ENST00000467319 BLOC1S4Q9NUP1 217 aa12.29□□□□□ -0.44
MSH5-212ENST00000467319 TFIP11Q9UBB9 837 aaKnown RBP12.29□□□□□ -0.44
MSH5-212ENST00000467319 PADI3Q9ULW8 664 aa12.29□□□□□ -0.44
MSH5-212ENST00000467319 DNM3Q9UQ16 869 aa12.29□□□□□ -0.44
MSH5-212ENST00000467319 NOC2LQ9Y3T9 749 aaKnown RBP12.29□□□□□ -0.44
MSH5-212ENST00000467319 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.28□□□□□ -0.44
MSH5-212ENST00000467319 GLRA2P23416 452 aa12.28□□□□□ -0.44
MSH5-212ENST00000467319 EIF4BP23588 611 aaKnown RBP12.28□□□□□ -0.44
MSH5-212ENST00000467319 FXR1P51114 621 aaKnown RBP eCLIP12.28□□□□□ -0.44
MSH5-212ENST00000467319 SLC12A3P55017 1021 aa12.28□□□□□ -0.44
MSH5-212ENST00000467319 NUCB2P80303 420 aa12.28□□□□□ -0.44
MSH5-212ENST00000467319 DEFB103AP81534 67 aa12.28□□□□□ -0.44
MSH5-212ENST00000467319 SMAD3P84022 425 aaKnown RBP12.28□□□□□ -0.44
MSH5-212ENST00000467319 MAPK7Q13164 816 aa12.28□□□□□ -0.44
MSH5-212ENST00000467319 CAPSQ13938 189 aa12.28□□□□□ -0.44
MSH5-212ENST00000467319 IKBKEQ14164 716 aa12.28□□□□□ -0.44
MSH5-212ENST00000467319 MXD4Q14582 209 aaPredicted RBP12.28□□□□□ -0.44
MSH5-212ENST00000467319 KARSQ15046 597 aaKnown RBP12.28□□□□□ -0.44
MSH5-212ENST00000467319 FOXD4L6Q3SYB3 417 aaPredicted RBP12.28□□□□□ -0.44
MSH5-212ENST00000467319 NAALADL2Q58DX5 795 aa12.28□□□□□ -0.44
MSH5-212ENST00000467319 SPECC1Q5M775 1068 aa12.28□□□□□ -0.44
MSH5-212ENST00000467319 FOXD4L3Q6VB84 417 aaPredicted RBP12.28□□□□□ -0.44
MSH5-212ENST00000467319 RHPN2Q8IUC4 686 aa12.28□□□□□ -0.44
MSH5-212ENST00000467319 KSR1Q8IVT5 923 aa12.28□□□□□ -0.44
MSH5-212ENST00000467319 DAW1Q8N136 415 aa12.28□□□□□ -0.44
MSH5-212ENST00000467319 NLRP7Q8WX94 980 aa12.28□□□□□ -0.44
MSH5-212ENST00000467319 EPSTI1Q96J88 318 aa12.28□□□□□ -0.44
MSH5-212ENST00000467319 SLC9A7Q96T83 725 aa12.28□□□□□ -0.44
MSH5-212ENST00000467319 NFKBIZQ9BYH8 718 aa12.28□□□□□ -0.44
MSH5-212ENST00000467319 POLR3FQ9H1D9 316 aaPredicted RBP12.28□□□□□ -0.44
MSH5-212ENST00000467319 TSPYL2Q9H2G4 693 aaPredicted RBP12.28□□□□□ -0.44
MSH5-212ENST00000467319 GPRC5CQ9NQ84 441 aa12.28□□□□□ -0.44
MSH5-212ENST00000467319 RCOR1Q9UKL0 485 aa12.28□□□□□ -0.44
MSH5-212ENST00000467319 CFAP45Q9UL16 551 aa12.28□□□□□ -0.44
MSH5-212ENST00000467319 CIZ1Q9ULV3 898 aaPredicted RBP12.28□□□□□ -0.44
MSH5-212ENST00000467319 GINS2Q9Y248 185 aa12.28□□□□□ -0.44
MSH5-212ENST00000467319 SLC4A7Q9Y6M7 1214 aa12.28□□□□□ -0.44
MSH5-212ENST00000467319 A0A087WZ62 844 aa12.27□□□□□ -0.45
MSH5-212ENST00000467319 A0A087X0B3 334 aa12.27□□□□□ -0.45
MSH5-212ENST00000467319 ZBBXA8MT70 800 aa12.27□□□□□ -0.45
MSH5-212ENST00000467319 ASAP2O43150 1006 aa12.27□□□□□ -0.45
MSH5-212ENST00000467319 CUTAO60888 179 aa12.27□□□□□ -0.45
MSH5-212ENST00000467319 RPS6KA5O75582 802 aa12.27□□□□□ -0.45
MSH5-212ENST00000467319 ATP2A2P16615 1042 aaKnown RBP12.27□□□□□ -0.45
MSH5-212ENST00000467319 GUCY2CP25092 1073 aa12.27□□□□□ -0.45
MSH5-212ENST00000467319 KRT85P78386 507 aa12.27□□□□□ -0.45
MSH5-212ENST00000467319 POU5F1BQ06416 359 aa12.27□□□□□ -0.45
MSH5-212ENST00000467319 DSC3Q14574 896 aa12.27□□□□□ -0.45
MSH5-212ENST00000467319 CDCA2Q69YH5 1023 aaPredicted RBP12.27□□□□□ -0.45
MSH5-212ENST00000467319 SHC4Q6S5L8 630 aa12.27□□□□□ -0.45
MSH5-212ENST00000467319 C1orf186Q6ZWK4 172 aa12.27□□□□□ -0.45
MSH5-212ENST00000467319 CRIPAKQ8N1N5 446 aa12.27□□□□□ -0.45
MSH5-212ENST00000467319 SYT2Q8N9I0 419 aaPredicted RBP12.27□□□□□ -0.45
MSH5-212ENST00000467319 PHOSPHO2Q8TCD6 241 aa12.27□□□□□ -0.45
MSH5-212ENST00000467319 LEO1Q8WVC0 666 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms