RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 EHMT1Q9H9B1 1298 aa17.8■□□□□ 0.44
SLX4-202ENST00000466154 PLCB1Q9NQ66 1216 aa17.8■□□□□ 0.44
SLX4-202ENST00000466154 BCCIPQ9P287 314 aaKnown RBP eCLIP17.8■□□□□ 0.44
SLX4-202ENST00000466154 LRRC37AA6NMS7 1700 aa17.8■□□□□ 0.44
SLX4-202ENST00000466154 ITGA4P13612 1032 aa17.8■□□□□ 0.44
SLX4-202ENST00000466154 DLG4P78352 724 aa17.8■□□□□ 0.44
SLX4-202ENST00000466154 MYL7Q01449 175 aa17.8■□□□□ 0.44
SLX4-202ENST00000466154 PADI6Q6TGC4 694 aa17.8■□□□□ 0.44
SLX4-202ENST00000466154 TUFT1Q9NNX1 390 aa17.8■□□□□ 0.44
SLX4-202ENST00000466154 GPRC5CQ9NQ84 441 aa17.8■□□□□ 0.44
SLX4-202ENST00000466154 CYP3A4P08684 503 aa17.79■□□□□ 0.44
SLX4-202ENST00000466154 HOXA7P31268 230 aaPredicted RBP17.79■□□□□ 0.44
SLX4-202ENST00000466154 GCLMP48507 274 aa17.79■□□□□ 0.44
SLX4-202ENST00000466154 PAK2Q13177 524 aa17.79■□□□□ 0.44
SLX4-202ENST00000466154 ZNF211Q13398 564 aaPredicted RBP17.79■□□□□ 0.44
SLX4-202ENST00000466154 METTL13Q8N6R0 699 aa17.79■□□□□ 0.44
SLX4-202ENST00000466154 USP38Q8NB14 1042 aa17.79■□□□□ 0.44
SLX4-202ENST00000466154 ZSWIM2Q8NEG5 633 aa17.79■□□□□ 0.44
SLX4-202ENST00000466154 DPH5Q9H2P9 285 aa17.79■□□□□ 0.44
SLX4-202ENST00000466154 BZW2Q9Y6E2 419 aaKnown RBP17.79■□□□□ 0.44
SLX4-202ENST00000466154 ZMYM2Q9UBW7 1377 aa17.79■□□□□ 0.44
SLX4-202ENST00000466154 ITGB5P18084 799 aa17.79■□□□□ 0.44
SLX4-202ENST00000466154 FOXR2Q6PJQ5 311 aa17.79■□□□□ 0.44
SLX4-202ENST00000466154 NSMFQ6X4W1 530 aa17.79■□□□□ 0.44
SLX4-202ENST00000466154 FAM151AQ8WW52 585 aa17.79■□□□□ 0.44
SLX4-202ENST00000466154 OLFML3Q9NRN5 406 aa17.79■□□□□ 0.44
SLX4-202ENST00000466154 KCNH7Q9NS40 1196 aa17.79■□□□□ 0.44
SLX4-202ENST00000466154 TAS2R14Q9NYV8 317 aa17.79■□□□□ 0.44
SLX4-202ENST00000466154 AMACRQ9UHK6 382 aa17.79■□□□□ 0.44
SLX4-202ENST00000466154 TNFAIP3P21580 790 aa17.79■□□□□ 0.44
SLX4-202ENST00000466154 GNGT1P63211 74 aa17.79■□□□□ 0.44
SLX4-202ENST00000466154 IFI16Q16666 785 aaKnown RBP17.79■□□□□ 0.44
SLX4-202ENST00000466154 STXBP4Q6ZWJ1 553 aa17.79■□□□□ 0.44
SLX4-202ENST00000466154 TPCN2Q8NHX9 752 aa17.79■□□□□ 0.44
SLX4-202ENST00000466154 INPP4AQ96PE3 977 aaPredicted RBP17.79■□□□□ 0.44
SLX4-202ENST00000466154 INTS2Q9H0H0 1204 aaKnown RBP17.79■□□□□ 0.44
SLX4-202ENST00000466154 UBE2TQ9NPD8 197 aaPredicted RBP17.79■□□□□ 0.44
SLX4-202ENST00000466154 NOC2LQ9Y3T9 749 aaKnown RBP17.79■□□□□ 0.44
SLX4-202ENST00000466154 PIK3CDO00329 1044 aa17.78■□□□□ 0.44
SLX4-202ENST00000466154 KRT13P13646 458 aa17.78■□□□□ 0.44
SLX4-202ENST00000466154 MMP14P50281 582 aa17.78■□□□□ 0.44
SLX4-202ENST00000466154 EMBQ6PCB8 327 aa17.78■□□□□ 0.44
SLX4-202ENST00000466154 PALB2Q86YC2 1186 aa17.78■□□□□ 0.44
SLX4-202ENST00000466154 OR2W6PQ8NHA6 318 aa17.78■□□□□ 0.44
SLX4-202ENST00000466154 LNX1Q8TBB1 728 aaPredicted RBP17.78■□□□□ 0.44
SLX4-202ENST00000466154 SLC5A5Q92911 643 aa17.78■□□□□ 0.44
SLX4-202ENST00000466154 CCDC127Q96BQ5 260 aa17.78■□□□□ 0.44
SLX4-202ENST00000466154 CELF4Q9BZC1 486 aaKnown RBP17.78■□□□□ 0.44
SLX4-202ENST00000466154 COL20A1Q9P218 1284 aa17.78■□□□□ 0.44
SLX4-202ENST00000466154 STK24Q9Y6E0 443 aa17.78■□□□□ 0.44
SLX4-202ENST00000466154 COL11A2P13942 1736 aaPredicted RBP17.78■□□□□ 0.44
SLX4-202ENST00000466154 SLC16A3O15427 465 aaKnown RBP17.78■□□□□ 0.44
SLX4-202ENST00000466154 HPDP32754 393 aaPredicted RBP17.78■□□□□ 0.44
SLX4-202ENST00000466154 SOX5P35711 763 aa17.78■□□□□ 0.44
SLX4-202ENST00000466154 ZC3H3Q8IXZ2 948 aaKnown RBP17.78■□□□□ 0.44
SLX4-202ENST00000466154 CTNNBL1Q8WYA6 563 aaPredicted RBP17.78■□□□□ 0.44
SLX4-202ENST00000466154 CBWD1Q9BRT8 395 aa17.78■□□□□ 0.44
SLX4-202ENST00000466154 KIFC3Q9BVG8 833 aa17.78■□□□□ 0.44
SLX4-202ENST00000466154 FAM107BQ9H098 131 aa17.78■□□□□ 0.44
SLX4-202ENST00000466154 ACP6Q9NPH0 428 aa17.78■□□□□ 0.44
SLX4-202ENST00000466154 TESPA1A2RU30 521 aaPredicted RBP17.77■□□□□ 0.44
SLX4-202ENST00000466154 F8VZ95 297 aa17.77■□□□□ 0.44
SLX4-202ENST00000466154 OPA1O60313 960 aa17.77■□□□□ 0.44
SLX4-202ENST00000466154 VIL1P09327 827 aaKnown RBP17.77■□□□□ 0.44
SLX4-202ENST00000466154 PPP2R5CQ13362 524 aa17.77■□□□□ 0.44
SLX4-202ENST00000466154 CCDC169A6NNP5 214 aa17.77■□□□□ 0.44
SLX4-202ENST00000466154 FERP16591 822 aa17.77■□□□□ 0.44
SLX4-202ENST00000466154 FKBP1AP62942 108 aaKnown RBP17.77■□□□□ 0.44
SLX4-202ENST00000466154 IRX5P78411 483 aaPredicted RBP17.77■□□□□ 0.44
SLX4-202ENST00000466154 PDCLQ13371 301 aa17.77■□□□□ 0.44
SLX4-202ENST00000466154 DPY19L2P1Q6NXN4 242 aa17.77■□□□□ 0.44
SLX4-202ENST00000466154 SUPT20HQ8NEM7 779 aa17.77■□□□□ 0.44
SLX4-202ENST00000466154 SLC35G2Q8TBE7 412 aa17.77■□□□□ 0.44
SLX4-202ENST00000466154 RRP15Q9Y3B9 282 aaKnown RBP17.77■□□□□ 0.44
SLX4-202ENST00000466154 EMSYQ7Z589 1322 aa17.77■□□□□ 0.44
SLX4-202ENST00000466154 SLC16A4O15374 487 aa17.77■□□□□ 0.43
SLX4-202ENST00000466154 IVLP07476 585 aa17.77■□□□□ 0.43
SLX4-202ENST00000466154 TNIP1Q15025 636 aa17.77■□□□□ 0.43
SLX4-202ENST00000466154 TTMPQ5BVD1 217 aa17.77■□□□□ 0.43
SLX4-202ENST00000466154 PLA2G4FQ68DD2 849 aa17.77■□□□□ 0.43
SLX4-202ENST00000466154 MSL3Q8N5Y2 521 aaKnown RBP17.77■□□□□ 0.43
SLX4-202ENST00000466154 C7orf43Q8WVR3 580 aa17.77■□□□□ 0.43
SLX4-202ENST00000466154 CAPS2Q9BXY5 557 aa17.77■□□□□ 0.43
SLX4-202ENST00000466154 SIPA1L1O43166 1804 aa17.77■□□□□ 0.43
SLX4-202ENST00000466154 PGRMC1O00264 195 aaKnown RBP17.76■□□□□ 0.43
SLX4-202ENST00000466154 FOXN3O00409 490 aaPredicted RBP17.76■□□□□ 0.43
SLX4-202ENST00000466154 SART1O43290 800 aaKnown RBP17.76■□□□□ 0.43
SLX4-202ENST00000466154 BUB1BO60566 1050 aaPredicted RBP17.76■□□□□ 0.43
SLX4-202ENST00000466154 CCT5P48643 541 aa17.76■□□□□ 0.43
SLX4-202ENST00000466154 PEX3P56589 373 aa17.76■□□□□ 0.43
SLX4-202ENST00000466154 ITIH3Q06033 890 aa17.76■□□□□ 0.43
SLX4-202ENST00000466154 NNTQ13423 1086 aa17.76■□□□□ 0.43
SLX4-202ENST00000466154 BMT2Q1RMZ1 405 aa17.76■□□□□ 0.43
SLX4-202ENST00000466154 FAM102BQ5T8I3 360 aa17.76■□□□□ 0.43
SLX4-202ENST00000466154 TTLL6Q8N841 843 aa17.76■□□□□ 0.43
SLX4-202ENST00000466154 SLC20A1Q8WUM9 679 aa17.76■□□□□ 0.43
SLX4-202ENST00000466154 MXRA8Q9BRK3 442 aa17.76■□□□□ 0.43
SLX4-202ENST00000466154 RANBP17Q9H2T7 1088 aaKnown RBP17.76■□□□□ 0.43
SLX4-202ENST00000466154 FZD1Q9UP38 647 aa17.76■□□□□ 0.43
SLX4-202ENST00000466154 IGSF9BQ9UPX0 1349 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms