RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 SEPT4O43236 478 aa6.67□□□□□ -1.34
CHMP3-206ENST00000466032 CHMP2AO43633 222 aa6.67□□□□□ -1.34
CHMP3-206ENST00000466032 HBP1O60381 514 aa6.67□□□□□ -1.34
CHMP3-206ENST00000466032 ATP9AO75110 1047 aa6.67□□□□□ -1.34
CHMP3-206ENST00000466032 DUSP11O75319 330 aaKnown RBP6.67□□□□□ -1.34
CHMP3-206ENST00000466032 TBCAO75347 108 aaKnown RBP6.67□□□□□ -1.34
CHMP3-206ENST00000466032 MED24O75448 989 aa6.67□□□□□ -1.34
CHMP3-206ENST00000466032 LGR5O75473 907 aa6.67□□□□□ -1.34
CHMP3-206ENST00000466032 TBC1D8O95759 1140 aa6.67□□□□□ -1.34
CHMP3-206ENST00000466032 SNAI1O95863 264 aaPredicted RBP6.67□□□□□ -1.34
CHMP3-206ENST00000466032 HMGCRP04035 888 aa6.67□□□□□ -1.34
CHMP3-206ENST00000466032 KRT18P05783 430 aaKnown RBP6.67□□□□□ -1.34
CHMP3-206ENST00000466032 FURINP09958 794 aa6.67□□□□□ -1.34
CHMP3-206ENST00000466032 MAPTP10636 758 aaKnown RBP6.67□□□□□ -1.34
CHMP3-206ENST00000466032 HOXD8P13378 290 aaPredicted RBP6.67□□□□□ -1.34
CHMP3-206ENST00000466032 ERCC5P28715 1186 aaPredicted RBP6.67□□□□□ -1.34
CHMP3-206ENST00000466032 CDC25AP30304 524 aa6.67□□□□□ -1.34
CHMP3-206ENST00000466032 YWHABP31946 246 aaKnown RBP6.67□□□□□ -1.34
CHMP3-206ENST00000466032 RFC5P40937 340 aa6.67□□□□□ -1.34
CHMP3-206ENST00000466032 FLT3LGP49771 235 aa6.67□□□□□ -1.34
CHMP3-206ENST00000466032 SLC12A3P55017 1021 aa6.67□□□□□ -1.34
CHMP3-206ENST00000466032 RTP1P59025 263 aa6.67□□□□□ -1.34
CHMP3-206ENST00000466032 NLRP12P59046 1061 aa6.67□□□□□ -1.34
CHMP3-206ENST00000466032 SNRPFP62306 86 aaKnown RBP6.67□□□□□ -1.34
CHMP3-206ENST00000466032 NKX3-2P78367 333 aa6.67□□□□□ -1.34
CHMP3-206ENST00000466032 TNFAIP2Q03169 654 aa6.67□□□□□ -1.34
CHMP3-206ENST00000466032 PKN2Q16513 984 aaKnown RBP6.67□□□□□ -1.34
CHMP3-206ENST00000466032 CAMK4Q16566 473 aa6.67□□□□□ -1.34
CHMP3-206ENST00000466032 NAALADL2Q58DX5 795 aa6.67□□□□□ -1.34
CHMP3-206ENST00000466032 ZNF658Q5TYW1 1059 aaPredicted RBP6.67□□□□□ -1.34
CHMP3-206ENST00000466032 NPLOC4Q8TAT6 608 aa6.67□□□□□ -1.34
CHMP3-206ENST00000466032 RAET1EQ8TD07 263 aa6.67□□□□□ -1.34
CHMP3-206ENST00000466032 DDX12PQ92771 950 aa6.67□□□□□ -1.34
CHMP3-206ENST00000466032 KIFAP3Q92845 792 aa6.67□□□□□ -1.34
CHMP3-206ENST00000466032 DYDC2Q96IM9 177 aa6.67□□□□□ -1.34
CHMP3-206ENST00000466032 DRC1Q96MC2 740 aa6.67□□□□□ -1.34
CHMP3-206ENST00000466032 SPATA33Q96N06 139 aa6.67□□□□□ -1.34
CHMP3-206ENST00000466032 PNMA5Q96PV4 448 aa6.67□□□□□ -1.34
CHMP3-206ENST00000466032 ZIC5Q96T25 663 aa6.67□□□□□ -1.34
CHMP3-206ENST00000466032 NIFKQ9BYG3 293 aaKnown RBP6.67□□□□□ -1.34
CHMP3-206ENST00000466032 PANK2Q9BZ23 570 aa6.67□□□□□ -1.34
CHMP3-206ENST00000466032 KATNBL1Q9H079 304 aa6.67□□□□□ -1.34
CHMP3-206ENST00000466032 AP5M1Q9H0R1 490 aa6.67□□□□□ -1.34
CHMP3-206ENST00000466032 BLOC1S4Q9NUP1 217 aa6.67□□□□□ -1.34
CHMP3-206ENST00000466032 EXOC1Q9NV70 894 aa6.67□□□□□ -1.34
CHMP3-206ENST00000466032 ERAP1Q9NZ08 941 aa6.67□□□□□ -1.34
CHMP3-206ENST00000466032 PCDHA5Q9Y5H7 936 aa6.67□□□□□ -1.34
CHMP3-206ENST00000466032 KIAA1217Q5T5P2 1943 aa6.67□□□□□ -1.34
CHMP3-206ENST00000466032 IGSF9BQ9UPX0 1349 aa6.67□□□□□ -1.34
CHMP3-206ENST00000466032 COL1A2P08123 1366 aa6.67□□□□□ -1.34
CHMP3-206ENST00000466032 PLXNA1Q9UIW2 1896 aa6.66□□□□□ -1.34
CHMP3-206ENST00000466032 A0A087X0B3 334 aa6.66□□□□□ -1.34
CHMP3-206ENST00000466032 RRN3P2A6NIE6 340 aa6.66□□□□□ -1.34
CHMP3-206ENST00000466032 A6NJR5 290 aa6.66□□□□□ -1.34
CHMP3-206ENST00000466032 PP2D1A8MPX8 630 aa6.66□□□□□ -1.34
CHMP3-206ENST00000466032 BECN2A8MW95 431 aa6.66□□□□□ -1.34
CHMP3-206ENST00000466032 DDX39AO00148 427 aaKnown RBP6.66□□□□□ -1.34
CHMP3-206ENST00000466032 PSMA7O14818 248 aa6.66□□□□□ -1.34
CHMP3-206ENST00000466032 IKBKBO14920 756 aa6.66□□□□□ -1.34
CHMP3-206ENST00000466032 MAGEB2O15479 319 aa6.66□□□□□ -1.34
CHMP3-206ENST00000466032 ASAP2O43150 1006 aa6.66□□□□□ -1.34
CHMP3-206ENST00000466032 ZBTB24O43167 697 aaPredicted RBP6.66□□□□□ -1.34
CHMP3-206ENST00000466032 CABYRO75952 493 aa6.66□□□□□ -1.34
CHMP3-206ENST00000466032 FGFR1OPO95684 399 aaKnown RBP6.66□□□□□ -1.34
CHMP3-206ENST00000466032 RPN1P04843 607 aaKnown RBP6.66□□□□□ -1.34
CHMP3-206ENST00000466032 ZNF865P0CJ78 1059 aaPredicted RBP6.66□□□□□ -1.34
CHMP3-206ENST00000466032 GNAT1P11488 350 aa6.66□□□□□ -1.34
CHMP3-206ENST00000466032 CYP2B6P20813 491 aa6.66□□□□□ -1.34
CHMP3-206ENST00000466032 TCF7P36402 384 aaPredicted RBP6.66□□□□□ -1.34
CHMP3-206ENST00000466032 AFMP43652 599 aa6.66□□□□□ -1.34
CHMP3-206ENST00000466032 RARRES1P49788 294 aa6.66□□□□□ -1.34
CHMP3-206ENST00000466032 MRE11P49959 708 aa6.66□□□□□ -1.34
CHMP3-206ENST00000466032 DNM2P50570 870 aa6.66□□□□□ -1.34
CHMP3-206ENST00000466032 SMTNP53814 917 aa6.66□□□□□ -1.34
CHMP3-206ENST00000466032 ASIC1P78348 528 aa6.66□□□□□ -1.34
CHMP3-206ENST00000466032 SP2Q02086 613 aa6.66□□□□□ -1.34
CHMP3-206ENST00000466032 TYRO3Q06418 890 aa6.66□□□□□ -1.34
CHMP3-206ENST00000466032 SLC20A2Q08357 652 aa6.66□□□□□ -1.34
CHMP3-206ENST00000466032 PNOCQ13519 176 aa6.66□□□□□ -1.34
CHMP3-206ENST00000466032 MORC3Q14149 939 aa6.66□□□□□ -1.34
CHMP3-206ENST00000466032 PPP2R5AQ15172 486 aa6.66□□□□□ -1.34
CHMP3-206ENST00000466032 LY6KQ17RY6 165 aa6.66□□□□□ -1.34
CHMP3-206ENST00000466032 CCDC144BQ3MJ40 725 aa6.66□□□□□ -1.34
CHMP3-206ENST00000466032 TPRNQ4KMQ1 711 aa6.66□□□□□ -1.34
CHMP3-206ENST00000466032 HS1BP3Q53T59 392 aa6.66□□□□□ -1.34
CHMP3-206ENST00000466032 ZNF484Q5JVG2 852 aa6.66□□□□□ -1.34
CHMP3-206ENST00000466032 SWSAP1Q6NVH7 229 aa6.66□□□□□ -1.34
CHMP3-206ENST00000466032 GPBP1Q86WP2 473 aa6.66□□□□□ -1.34
CHMP3-206ENST00000466032 FBXO16Q8IX29 292 aaPredicted RBP6.66□□□□□ -1.34
CHMP3-206ENST00000466032 CKAP2LQ8IYA6 745 aa6.66□□□□□ -1.34
CHMP3-206ENST00000466032 PCSK9Q8NBP7 692 aaKnown RBP6.66□□□□□ -1.34
CHMP3-206ENST00000466032 RETREG2Q8NC44 543 aa6.66□□□□□ -1.34
CHMP3-206ENST00000466032 FAM200AQ8TCP9 573 aa6.66□□□□□ -1.34
CHMP3-206ENST00000466032 IPO4Q8TEX9 1081 aaKnown RBP6.66□□□□□ -1.34
CHMP3-206ENST00000466032 TCP11Q8WWU5 503 aa6.66□□□□□ -1.34
CHMP3-206ENST00000466032 SLC7A3Q8WY07 619 aa6.66□□□□□ -1.34
CHMP3-206ENST00000466032 GLG1Q92896 1179 aa6.66□□□□□ -1.34
CHMP3-206ENST00000466032 KCNN1Q92952 543 aa6.66□□□□□ -1.34
CHMP3-206ENST00000466032 PURBQ96QR8 312 aaKnown RBP6.66□□□□□ -1.34
CHMP3-206ENST00000466032 GPR20Q99678 358 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms