RNA–Protein interactions for RNA: ENST00000465902.1

USP19-210, Transcript of ubiquitin specific peptidase 19, human

TSL 3

Gene USP19, Length 617 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP19-210	ENST00000465902	IGSF22	Q8N9C0	903 aa		19.79	■□□□□ 0.76
USP19-210	ENST00000465902	TMEM143	Q96AN5	459 aa		19.79	■□□□□ 0.76
USP19-210	ENST00000465902	TIFA	Q96CG3	184 aa		19.79	■□□□□ 0.76
USP19-210	ENST00000465902	MTR	Q99707	1265 aa		19.79	■□□□□ 0.76
USP19-210	ENST00000465902	NOC2L	Q9Y3T9	749 aa	Known RBP	19.79	■□□□□ 0.76
USP19-210	ENST00000465902	UPP2	O95045	317 aa		19.78	■□□□□ 0.76
USP19-210	ENST00000465902	XRCC6	P12956	609 aa	Known RBP eCLIP	19.78	■□□□□ 0.76
USP19-210	ENST00000465902	IBSP	P21815	317 aa	Predicted RBP	19.78	■□□□□ 0.76
USP19-210	ENST00000465902	RARRES1	P49788	294 aa		19.78	■□□□□ 0.76
USP19-210	ENST00000465902	GPC3	P51654	580 aa		19.78	■□□□□ 0.76
USP19-210	ENST00000465902	ODR4	Q5SWX8	454 aa		19.78	■□□□□ 0.76
USP19-210	ENST00000465902	ARL6IP4	Q66PJ3	421 aa	Known RBP	19.78	■□□□□ 0.76
USP19-210	ENST00000465902	TMEM40	Q8WWA1	233 aa		19.78	■□□□□ 0.76
USP19-210	ENST00000465902	NLRP4	Q96MN2	994 aa		19.78	■□□□□ 0.76
USP19-210	ENST00000465902	ADAMTS10	Q9H324	1103 aa		19.78	■□□□□ 0.76
USP19-210	ENST00000465902	DHX33	Q9H6R0	707 aa	Known RBP	19.78	■□□□□ 0.76
USP19-210	ENST00000465902	KIAA1024	Q9UPX6	916 aa		19.78	■□□□□ 0.76
USP19-210	ENST00000465902	CLIC4	Q9Y696	253 aa		19.78	■□□□□ 0.76
USP19-210	ENST00000465902	GPR182	O15218	404 aa		19.77	■□□□□ 0.76
USP19-210	ENST00000465902	TLL1	O43897	1013 aa		19.77	■□□□□ 0.76
USP19-210	ENST00000465902	USO1	O60763	962 aa	Known RBP	19.77	■□□□□ 0.76
USP19-210	ENST00000465902	MYOG	P15173	224 aa		19.77	■□□□□ 0.76
USP19-210	ENST00000465902	CDC42EP1	Q00587	391 aa		19.77	■□□□□ 0.76
USP19-210	ENST00000465902	KSR1	Q8IVT5	923 aa		19.77	■□□□□ 0.76
USP19-210	ENST00000465902	TCP11	Q8WWU5	503 aa		19.77	■□□□□ 0.76
USP19-210	ENST00000465902	PSPC1	Q8WXF1	523 aa	Known RBP	19.77	■□□□□ 0.76
USP19-210	ENST00000465902	FTHL17	Q9BXU8	183 aa		19.77	■□□□□ 0.76
USP19-210	ENST00000465902	GCOM2	Q9BZD3	368 aa	Predicted RBP	19.77	■□□□□ 0.76
USP19-210	ENST00000465902	NKX2-4	Q9H2Z4	354 aa		19.77	■□□□□ 0.76
USP19-210	ENST00000465902	ATP6V0A4	Q9HBG4	840 aa		19.77	■□□□□ 0.76
USP19-210	ENST00000465902	DDX19A	Q9NUU7	478 aa	Known RBP	19.77	■□□□□ 0.76
USP19-210	ENST00000465902	ST3GAL5	Q9UNP4	418 aa		19.77	■□□□□ 0.76
USP19-210	ENST00000465902	PCDHA11	Q9Y5I1	949 aa		19.77	■□□□□ 0.76
USP19-210	ENST00000465902		A0A087WZ62	844 aa		19.76	■□□□□ 0.75
USP19-210	ENST00000465902	ARHGEF35	A5YM69	484 aa		19.76	■□□□□ 0.75
USP19-210	ENST00000465902	GAS2	O43903	313 aa	Known RBP	19.76	■□□□□ 0.75
USP19-210	ENST00000465902	DGAT1	O75907	488 aa		19.76	■□□□□ 0.75
USP19-210	ENST00000465902	SRGAP2C	P0DJJ0	459 aa		19.76	■□□□□ 0.75
USP19-210	ENST00000465902	PDIA4	P13667	645 aa	Known RBP	19.76	■□□□□ 0.75
USP19-210	ENST00000465902	MUT	P22033	750 aa		19.76	■□□□□ 0.75
USP19-210	ENST00000465902	EIF4B	P23588	611 aa	Known RBP	19.76	■□□□□ 0.75
USP19-210	ENST00000465902	ECM1	Q16610	540 aa		19.76	■□□□□ 0.75
USP19-210	ENST00000465902	MAEA	Q7L5Y9	396 aa		19.76	■□□□□ 0.75
USP19-210	ENST00000465902	PRPF31	Q8WWY3	499 aa	Known RBP	19.76	■□□□□ 0.75
USP19-210	ENST00000465902	CDK5RAP3	Q96JB5	506 aa		19.76	■□□□□ 0.75
USP19-210	ENST00000465902	FDXACB1	Q9BRP7	624 aa	Predicted RBP	19.76	■□□□□ 0.75
USP19-210	ENST00000465902	ZNF576	Q9H609	170 aa		19.76	■□□□□ 0.75
USP19-210	ENST00000465902	SLC28A3	Q9HAS3	691 aa		19.76	■□□□□ 0.75
USP19-210	ENST00000465902	ERVK-5	Q9HDB9	667 aa		19.76	■□□□□ 0.75
USP19-210	ENST00000465902	DBR1	Q9UK59	544 aa	Known RBP	19.76	■□□□□ 0.75
USP19-210	ENST00000465902	YBX2	Q9Y2T7	364 aa	Known RBP	19.76	■□□□□ 0.75
USP19-210	ENST00000465902	COL4A3BP	Q9Y5P4	624 aa		19.76	■□□□□ 0.75
USP19-210	ENST00000465902	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	19.75	■□□□□ 0.75
USP19-210	ENST00000465902	DENND3	A2RUS2	1198 aa		19.75	■□□□□ 0.75
USP19-210	ENST00000465902	ENPP3	O14638	875 aa		19.75	■□□□□ 0.75
USP19-210	ENST00000465902	CSDE1	O75534	798 aa	Known RBP	19.75	■□□□□ 0.75
USP19-210	ENST00000465902	ZSCAN22	P10073	491 aa	Predicted RBP	19.75	■□□□□ 0.75
USP19-210	ENST00000465902	GRIN2C	Q14957	1233 aa		19.75	■□□□□ 0.75
USP19-210	ENST00000465902	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	19.75	■□□□□ 0.75
USP19-210	ENST00000465902	FOXD4L3	Q6VB84	417 aa	Predicted RBP	19.75	■□□□□ 0.75
USP19-210	ENST00000465902	FAM228A	Q86W67	206 aa		19.75	■□□□□ 0.75
USP19-210	ENST00000465902	MYLIP	Q8WY64	445 aa		19.75	■□□□□ 0.75
USP19-210	ENST00000465902	PLIN2	Q99541	437 aa		19.75	■□□□□ 0.75
USP19-210	ENST00000465902	DNM3	Q9UQ16	869 aa		19.75	■□□□□ 0.75
USP19-210	ENST00000465902	TTC3	P53804	2025 aa		19.75	■□□□□ 0.75
USP19-210	ENST00000465902	GJB5	O95377	273 aa		19.74	■□□□□ 0.75
USP19-210	ENST00000465902	DARS	P14868	501 aa	Known RBP	19.74	■□□□□ 0.75
USP19-210	ENST00000465902	FGFR4	P22455	802 aa		19.74	■□□□□ 0.75
USP19-210	ENST00000465902	MARCKS	P29966	332 aa	Predicted RBP	19.74	■□□□□ 0.75
USP19-210	ENST00000465902	LAMTOR4	Q0VGL1	99 aa		19.74	■□□□□ 0.75
USP19-210	ENST00000465902	PADI6	Q6TGC4	694 aa		19.74	■□□□□ 0.75
USP19-210	ENST00000465902	ZNF410	Q86VK4	478 aa		19.74	■□□□□ 0.75
USP19-210	ENST00000465902	RASSF8	Q8NHQ8	419 aa		19.74	■□□□□ 0.75
USP19-210	ENST00000465902	USP28	Q96RU2	1077 aa		19.74	■□□□□ 0.75
USP19-210	ENST00000465902	BHMT2	Q9H2M3	363 aa		19.74	■□□□□ 0.75
USP19-210	ENST00000465902	TMX1	Q9H3N1	280 aa		19.74	■□□□□ 0.75
USP19-210	ENST00000465902	ASAP2	O43150	1006 aa		19.73	■□□□□ 0.75
USP19-210	ENST00000465902	CA3	P07451	260 aa		19.73	■□□□□ 0.75
USP19-210	ENST00000465902	UBA7	P41226	1012 aa		19.73	■□□□□ 0.75
USP19-210	ENST00000465902	PPP2R2D	Q66LE6	453 aa		19.73	■□□□□ 0.75
USP19-210	ENST00000465902	CABP7	Q86V35	215 aa		19.73	■□□□□ 0.75
USP19-210	ENST00000465902	AK8	Q96MA6	479 aa		19.73	■□□□□ 0.75
USP19-210	ENST00000465902	ZNF396	Q96N95	335 aa	Predicted RBP	19.73	■□□□□ 0.75
USP19-210	ENST00000465902	RAD9A	Q99638	391 aa		19.73	■□□□□ 0.75
USP19-210	ENST00000465902	ADAM2	Q99965	735 aa		19.73	■□□□□ 0.75
USP19-210	ENST00000465902	MMTAG2	Q9BU76	263 aa	Known RBP	19.73	■□□□□ 0.75
USP19-210	ENST00000465902	INO80B	Q9C086	356 aa	Predicted RBP	19.73	■□□□□ 0.75
USP19-210	ENST00000465902	XPNPEP1	Q9NQW7	623 aa		19.73	■□□□□ 0.75
USP19-210	ENST00000465902	TFIP11	Q9UBB9	837 aa	Known RBP	19.73	■□□□□ 0.75
USP19-210	ENST00000465902	DAXX	Q9UER7	740 aa	Predicted RBP	19.73	■□□□□ 0.75
USP19-210	ENST00000465902	CHD9	Q3L8U1	2897 aa		19.72	■□□□□ 0.75
USP19-210	ENST00000465902		E9PMD0	336 aa		19.72	■□□□□ 0.75
USP19-210	ENST00000465902	F13A1	P00488	732 aa		19.72	■□□□□ 0.75
USP19-210	ENST00000465902	SSB	P05455	408 aa	Known RBP eCLIP	19.72	■□□□□ 0.75
USP19-210	ENST00000465902	ZSCAN20	P17040	1043 aa	Predicted RBP	19.72	■□□□□ 0.75
USP19-210	ENST00000465902	LONP1	P36776	959 aa	Known RBP	19.72	■□□□□ 0.75
USP19-210	ENST00000465902	PKP1	Q13835	747 aa		19.72	■□□□□ 0.75
USP19-210	ENST00000465902	MXD4	Q14582	209 aa	Predicted RBP	19.72	■□□□□ 0.75
USP19-210	ENST00000465902	PTPA	Q15257	358 aa		19.72	■□□□□ 0.75
USP19-210	ENST00000465902	FAM102B	Q5T8I3	360 aa		19.72	■□□□□ 0.75

Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms