RNA–Protein interactions for RNA: ENST00000465522.5

ITGA4-204, Transcript of integrin subunit alpha 4, humanhuman

TSL 2

Gene ITGA4, Length 1,721 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-204ENST00000465522 DMP1Q13316 513 aaPredicted RBP23.96■■□□□ 1.43
ITGA4-204ENST00000465522 MAP3K21Q5TCX8 1036 aa23.96■■□□□ 1.43
ITGA4-204ENST00000465522 ANKRD40Q6AI12 368 aa23.96■■□□□ 1.43
ITGA4-204ENST00000465522 NELFCDQ8IXH7 590 aa23.96■■□□□ 1.43
ITGA4-204ENST00000465522 ZNF507Q8TCN5 953 aa23.96■■□□□ 1.43
ITGA4-204ENST00000465522 TMEM143Q96AN5 459 aa23.96■■□□□ 1.43
ITGA4-204ENST00000465522 JPH2Q9BR39 696 aaPredicted RBP23.96■■□□□ 1.43
ITGA4-204ENST00000465522 POLR3FQ9H1D9 316 aaPredicted RBP23.96■■□□□ 1.43
ITGA4-204ENST00000465522 SEMA6BQ9H3T3 888 aa23.96■■□□□ 1.43
ITGA4-204ENST00000465522 EIF3DO15371 548 aaKnown RBP eCLIP23.95■■□□□ 1.42
ITGA4-204ENST00000465522 PRPF6O94906 941 aaKnown RBP23.95■■□□□ 1.42
ITGA4-204ENST00000465522 GRK4P32298 578 aa23.95■■□□□ 1.42
ITGA4-204ENST00000465522 RTP1P59025 263 aa23.95■■□□□ 1.42
ITGA4-204ENST00000465522 GNASQ5JWF2 1037 aa23.95■■□□□ 1.42
ITGA4-204ENST00000465522 TRAPPC12Q8WVT3 735 aa23.95■■□□□ 1.42
ITGA4-204ENST00000465522 IFT74Q96LB3 600 aa23.95■■□□□ 1.42
ITGA4-204ENST00000465522 HSD3B7Q9H2F3 369 aa23.95■■□□□ 1.42
ITGA4-204ENST00000465522 SUGCTQ9HAC7 445 aa23.95■■□□□ 1.42
ITGA4-204ENST00000465522 SAMSN1Q9NSI8 373 aaKnown RBP23.95■■□□□ 1.42
ITGA4-204ENST00000465522 CCDC169A6NNP5 214 aa23.94■■□□□ 1.42
ITGA4-204ENST00000465522 K7ENM7 598 aa23.94■■□□□ 1.42
ITGA4-204ENST00000465522 IGBP1P78318 339 aa23.94■■□□□ 1.42
ITGA4-204ENST00000465522 ZC2HC1CQ53FD0 456 aaPredicted RBP23.94■■□□□ 1.42
ITGA4-204ENST00000465522 TTI2Q6NXR4 508 aa23.94■■□□□ 1.42
ITGA4-204ENST00000465522 SLC17A8Q8NDX2 589 aa23.94■■□□□ 1.42
ITGA4-204ENST00000465522 KCNG1Q9UIX4 513 aa23.94■■□□□ 1.42
ITGA4-204ENST00000465522 EVPLQ92817 2033 aa23.93■■□□□ 1.42
ITGA4-204ENST00000465522 GAS2O43903 313 aaKnown RBP23.93■■□□□ 1.42
ITGA4-204ENST00000465522 PGK1P00558 417 aa23.93■■□□□ 1.42
ITGA4-204ENST00000465522 F2P00734 622 aa23.93■■□□□ 1.42
ITGA4-204ENST00000465522 CDK11BP21127 795 aaKnown RBP23.93■■□□□ 1.42
ITGA4-204ENST00000465522 CHMP4BP1P59074 171 aa23.93■■□□□ 1.42
ITGA4-204ENST00000465522 KNOP1Q1ED39 458 aaKnown RBP23.93■■□□□ 1.42
ITGA4-204ENST00000465522 TSG101Q99816 390 aa23.93■■□□□ 1.42
ITGA4-204ENST00000465522 NTPCRQ9BSD7 190 aaKnown RBP23.93■■□□□ 1.42
ITGA4-204ENST00000465522 UPF3AQ9H1J1 476 aaKnown RBP23.93■■□□□ 1.42
ITGA4-204ENST00000465522 XPNPEP3Q9NQH7 507 aa23.93■■□□□ 1.42
ITGA4-204ENST00000465522 PTCH2Q9Y6C5 1203 aa23.93■■□□□ 1.42
ITGA4-204ENST00000465522 COL1A2P08123 1366 aa23.93■■□□□ 1.42
ITGA4-204ENST00000465522 HTTP42858 3142 aa23.93■■□□□ 1.42
ITGA4-204ENST00000465522 KPNA6O60684 536 aa23.93■■□□□ 1.42
ITGA4-204ENST00000465522 ARL2P36404 184 aa23.93■■□□□ 1.42
ITGA4-204ENST00000465522 NPTX2P47972 431 aa23.93■■□□□ 1.42
ITGA4-204ENST00000465522 LRRC63Q05C16 580 aa23.93■■□□□ 1.42
ITGA4-204ENST00000465522 ALCAMQ13740 583 aa23.93■■□□□ 1.42
ITGA4-204ENST00000465522 BMT2Q1RMZ1 405 aa23.93■■□□□ 1.42
ITGA4-204ENST00000465522 KIAA0753Q2KHM9 967 aa23.93■■□□□ 1.42
ITGA4-204ENST00000465522 HSP90AA4PQ58FG1 418 aa23.93■■□□□ 1.42
ITGA4-204ENST00000465522 HAUS6Q7Z4H7 955 aa23.93■■□□□ 1.42
ITGA4-204ENST00000465522 SPIRE2Q8WWL2 714 aa23.93■■□□□ 1.42
ITGA4-204ENST00000465522 TCP11Q8WWU5 503 aa23.93■■□□□ 1.42
ITGA4-204ENST00000465522 BSNDQ8WZ55 320 aa23.93■■□□□ 1.42
ITGA4-204ENST00000465522 KAT2BQ92831 832 aa23.93■■□□□ 1.42
ITGA4-204ENST00000465522 KMT5AQ9NQR1 393 aa23.93■■□□□ 1.42
ITGA4-204ENST00000465522 IGKV6-21A0A0C4DH24 114 aa23.92■■□□□ 1.42
ITGA4-204ENST00000465522 MYADML2A6NDP7 307 aa23.92■■□□□ 1.42
ITGA4-204ENST00000465522 SLC16A4O15374 487 aa23.92■■□□□ 1.42
ITGA4-204ENST00000465522 ZEB2O60315 1214 aa23.92■■□□□ 1.42
ITGA4-204ENST00000465522 INHAP05111 366 aa23.92■■□□□ 1.42
ITGA4-204ENST00000465522 NCKAP1LP55160 1127 aa23.92■■□□□ 1.42
ITGA4-204ENST00000465522 PPFIA1Q13136 1202 aa23.92■■□□□ 1.42
ITGA4-204ENST00000465522 IER5Q5VY09 327 aa23.92■■□□□ 1.42
ITGA4-204ENST00000465522 CSGALNACT2Q8N6G5 542 aa23.92■■□□□ 1.42
ITGA4-204ENST00000465522 RETREG2Q8NC44 543 aa23.92■■□□□ 1.42
ITGA4-204ENST00000465522 DUSP9Q99956 384 aaKnown RBP23.92■■□□□ 1.42
ITGA4-204ENST00000465522 SRRTQ9BXP5 876 aaKnown RBP23.92■■□□□ 1.42
ITGA4-204ENST00000465522 KCTD10Q9H3F6 313 aa23.92■■□□□ 1.42
ITGA4-204ENST00000465522 MAGEB2O15479 319 aa23.91■■□□□ 1.42
ITGA4-204ENST00000465522 AP5Z1O43299 807 aa23.91■■□□□ 1.42
ITGA4-204ENST00000465522 KLRC1P26715 233 aa23.91■■□□□ 1.42
ITGA4-204ENST00000465522 HOXD13P35453 343 aa23.91■■□□□ 1.42
ITGA4-204ENST00000465522 MFSD10Q14728 455 aa23.91■■□□□ 1.42
ITGA4-204ENST00000465522 PPP2R5AQ15172 486 aa23.91■■□□□ 1.42
ITGA4-204ENST00000465522 EFCAB12Q6NXP0 572 aa23.91■■□□□ 1.42
ITGA4-204ENST00000465522 METTL13Q8N6R0 699 aa23.91■■□□□ 1.42
ITGA4-204ENST00000465522 KATNAL1Q9BW62 490 aa23.91■■□□□ 1.42
ITGA4-204ENST00000465522 STRA6Q9BX79 667 aa23.91■■□□□ 1.42
ITGA4-204ENST00000465522 ST6GALNAC4Q9H4F1 302 aa23.91■■□□□ 1.42
ITGA4-204ENST00000465522 UBE4BO95155 1302 aa23.9■■□□□ 1.42
ITGA4-204ENST00000465522 ATP1A3P13637 1013 aa23.9■■□□□ 1.42
ITGA4-204ENST00000465522 ZNF18P17022 549 aa23.9■■□□□ 1.42
ITGA4-204ENST00000465522 PSEN2P49810 448 aa23.9■■□□□ 1.42
ITGA4-204ENST00000465522 DNM2P50570 870 aa23.9■■□□□ 1.42
ITGA4-204ENST00000465522 NKX3-2P78367 333 aa23.9■■□□□ 1.42
ITGA4-204ENST00000465522 PURAQ00577 322 aaKnown RBP23.9■■□□□ 1.42
ITGA4-204ENST00000465522 KCNA1Q09470 495 aa23.9■■□□□ 1.42
ITGA4-204ENST00000465522 GRIK4Q16099 956 aa23.9■■□□□ 1.42
ITGA4-204ENST00000465522 FOXR2Q6PJQ5 311 aa23.9■■□□□ 1.42
ITGA4-204ENST00000465522 KSR1Q8IVT5 923 aa23.9■■□□□ 1.42
ITGA4-204ENST00000465522 LRRC71Q8N4P6 559 aa23.9■■□□□ 1.42
ITGA4-204ENST00000465522 TRIM5Q9C035 493 aa23.9■■□□□ 1.42
ITGA4-204ENST00000465522 HMX1Q9NP08 348 aaPredicted RBP23.9■■□□□ 1.42
ITGA4-204ENST00000465522 DDX20Q9UHI6 824 aaKnown RBP23.9■■□□□ 1.42
ITGA4-204ENST00000465522 RRN3P2A6NIE6 340 aa23.9■■□□□ 1.42
ITGA4-204ENST00000465522 PDXKO00764 312 aa23.9■■□□□ 1.42
ITGA4-204ENST00000465522 PPP1R37O75864 691 aa23.9■■□□□ 1.42
ITGA4-204ENST00000465522 C22orf31O95567 290 aa23.9■■□□□ 1.42
ITGA4-204ENST00000465522 GLRA2P23416 452 aa23.9■■□□□ 1.42
ITGA4-204ENST00000465522 GTF2BQ00403 316 aa23.9■■□□□ 1.42
ITGA4-204ENST00000465522 DRP2Q13474 957 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms