RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 CD52P31358 61 aa22.62■■□□□ 1.21
SKA3-205ENST00000465471 IKBKEQ14164 716 aa22.62■■□□□ 1.21
SKA3-205ENST00000465471 FAM109BQ6ICB4 259 aaPredicted RBP22.62■■□□□ 1.21
SKA3-205ENST00000465471 FAM43BQ6ZT52 329 aaPredicted RBP22.62■■□□□ 1.21
SKA3-205ENST00000465471 ZNF410Q86VK4 478 aa22.62■■□□□ 1.21
SKA3-205ENST00000465471 KRI1Q8N9T8 703 aaKnown RBP22.62■■□□□ 1.21
SKA3-205ENST00000465471 PSPC1Q8WXF1 523 aaKnown RBP22.62■■□□□ 1.21
SKA3-205ENST00000465471 CLIC6Q96NY7 704 aa22.62■■□□□ 1.21
SKA3-205ENST00000465471 CCSER1Q9C0I3 900 aa22.62■■□□□ 1.21
SKA3-205ENST00000465471 BHMT2Q9H2M3 363 aa22.62■■□□□ 1.21
SKA3-205ENST00000465471 ERVK-5Q9HDB9 667 aa22.62■■□□□ 1.21
SKA3-205ENST00000465471 PADI3Q9ULW8 664 aa22.62■■□□□ 1.21
SKA3-205ENST00000465471 GINS2Q9Y248 185 aa22.62■■□□□ 1.21
SKA3-205ENST00000465471 NOC2LQ9Y3T9 749 aaKnown RBP22.62■■□□□ 1.21
SKA3-205ENST00000465471 COL4A3BPQ9Y5P4 624 aa22.62■■□□□ 1.21
SKA3-205ENST00000465471 SLC4A7Q9Y6M7 1214 aa22.62■■□□□ 1.21
SKA3-205ENST00000465471 ZBBXA8MT70 800 aa22.61■■□□□ 1.21
SKA3-205ENST00000465471 SPTLC2O15270 562 aa22.61■■□□□ 1.21
SKA3-205ENST00000465471 USO1O60763 962 aaKnown RBP22.61■■□□□ 1.21
SKA3-205ENST00000465471 EIF4BP23588 611 aaKnown RBP22.61■■□□□ 1.21
SKA3-205ENST00000465471 ARL2P36404 184 aa22.61■■□□□ 1.21
SKA3-205ENST00000465471 UBA7P41226 1012 aa22.61■■□□□ 1.21
SKA3-205ENST00000465471 DNM1Q05193 864 aaKnown RBP22.61■■□□□ 1.21
SKA3-205ENST00000465471 STK38Q15208 465 aa22.61■■□□□ 1.21
SKA3-205ENST00000465471 PADI6Q6TGC4 694 aa22.61■■□□□ 1.21
SKA3-205ENST00000465471 RHPN2Q8IUC4 686 aa22.61■■□□□ 1.21
SKA3-205ENST00000465471 MCPH1Q8NEM0 835 aa22.61■■□□□ 1.21
SKA3-205ENST00000465471 PRPF31Q8WWY3 499 aaKnown RBP22.61■■□□□ 1.21
SKA3-205ENST00000465471 GBF1Q92538 1859 aa22.61■■□□□ 1.21
SKA3-205ENST00000465471 SLC9A7Q96T83 725 aa22.61■■□□□ 1.21
SKA3-205ENST00000465471 DNM3Q9UQ16 869 aa22.61■■□□□ 1.21
SKA3-205ENST00000465471 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.6■■□□□ 1.21
SKA3-205ENST00000465471 ARHGEF35A5YM69 484 aa22.6■■□□□ 1.21
SKA3-205ENST00000465471 RPS6KA5O75582 802 aa22.6■■□□□ 1.21
SKA3-205ENST00000465471 DARSP14868 501 aaKnown RBP22.6■■□□□ 1.21
SKA3-205ENST00000465471 CYP11B2P19099 503 aa22.6■■□□□ 1.21
SKA3-205ENST00000465471 FXR1P51114 621 aaKnown RBP eCLIP22.6■■□□□ 1.21
SKA3-205ENST00000465471 SMAD3P84022 425 aaKnown RBP22.6■■□□□ 1.21
SKA3-205ENST00000465471 PAK2Q13177 524 aa22.6■■□□□ 1.21
SKA3-205ENST00000465471 FOXD4L6Q3SYB3 417 aaPredicted RBP22.6■■□□□ 1.21
SKA3-205ENST00000465471 FOXD4L3Q6VB84 417 aaPredicted RBP22.6■■□□□ 1.21
SKA3-205ENST00000465471 USP49Q70CQ1 688 aa22.6■■□□□ 1.21
SKA3-205ENST00000465471 FAM228AQ86W67 206 aa22.6■■□□□ 1.21
SKA3-205ENST00000465471 KSR1Q8IVT5 923 aa22.6■■□□□ 1.21
SKA3-205ENST00000465471 PHOSPHO2Q8TCD6 241 aa22.6■■□□□ 1.21
SKA3-205ENST00000465471 LRRC15Q8TF66 581 aa22.6■■□□□ 1.21
SKA3-205ENST00000465471 LINC01599Q8WXQ3 324 aa22.6■■□□□ 1.21
SKA3-205ENST00000465471 TMX1Q9H3N1 280 aa22.6■■□□□ 1.21
SKA3-205ENST00000465471 IFT122Q9HBG6 1241 aa22.6■■□□□ 1.21
SKA3-205ENST00000465471 A0A087WZ62 844 aa22.59■■□□□ 1.21
SKA3-205ENST00000465471 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.59■■□□□ 1.21
SKA3-205ENST00000465471 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.59■■□□□ 1.21
SKA3-205ENST00000465471 ASAP2O43150 1006 aa22.59■■□□□ 1.21
SKA3-205ENST00000465471 DEFB103AP81534 67 aa22.59■■□□□ 1.21
SKA3-205ENST00000465471 LAMTOR4Q0VGL1 99 aa22.59■■□□□ 1.21
SKA3-205ENST00000465471 ASAP3Q8TDY4 903 aa22.59■■□□□ 1.21
SKA3-205ENST00000465471 NLRP7Q8WX94 980 aa22.59■■□□□ 1.21
SKA3-205ENST00000465471 SYMPKQ92797 1274 aaKnown RBP22.59■■□□□ 1.21
SKA3-205ENST00000465471 EPSTI1Q96J88 318 aa22.59■■□□□ 1.21
SKA3-205ENST00000465471 ZNF668Q96K58 619 aaPredicted RBP22.59■■□□□ 1.21
SKA3-205ENST00000465471 FDXACB1Q9BRP7 624 aaPredicted RBP22.59■■□□□ 1.21
SKA3-205ENST00000465471 DAXXQ9UER7 740 aaPredicted RBP22.59■■□□□ 1.21
SKA3-205ENST00000465471 CFAP45Q9UL16 551 aa22.59■■□□□ 1.21
SKA3-205ENST00000465471 ATP2A2P16615 1042 aaKnown RBP22.58■■□□□ 1.21
SKA3-205ENST00000465471 KCNJ6P48051 423 aa22.58■■□□□ 1.21
SKA3-205ENST00000465471 POU5F1BQ06416 359 aa22.58■■□□□ 1.21
SKA3-205ENST00000465471 MXD4Q14582 209 aaPredicted RBP22.58■■□□□ 1.21
SKA3-205ENST00000465471 KARSQ15046 597 aaKnown RBP22.58■■□□□ 1.21
SKA3-205ENST00000465471 SPECC1Q5M775 1068 aa22.58■■□□□ 1.21
SKA3-205ENST00000465471 ODR4Q5SWX8 454 aa22.58■■□□□ 1.21
SKA3-205ENST00000465471 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.58■■□□□ 1.21
SKA3-205ENST00000465471 KCNG4Q8TDN1 519 aa22.58■■□□□ 1.21
SKA3-205ENST00000465471 CALML4Q96GE6 196 aa22.58■■□□□ 1.21
SKA3-205ENST00000465471 CDK5RAP3Q96JB5 506 aa22.58■■□□□ 1.21
SKA3-205ENST00000465471 FTHL17Q9BXU8 183 aa22.58■■□□□ 1.21
SKA3-205ENST00000465471 GCOM2Q9BZD3 368 aaPredicted RBP22.58■■□□□ 1.21
SKA3-205ENST00000465471 RCOR1Q9UKL0 485 aa22.58■■□□□ 1.21
SKA3-205ENST00000465471 ST3GAL5Q9UNP4 418 aa22.58■■□□□ 1.21
SKA3-205ENST00000465471 SZT2Q5T011 3432 aa22.58■■□□□ 1.2
SKA3-205ENST00000465471 GPR182O15218 404 aa22.57■■□□□ 1.2
SKA3-205ENST00000465471 PLCG1P19174 1290 aa22.57■■□□□ 1.2
SKA3-205ENST00000465471 GLRA2P23416 452 aa22.57■■□□□ 1.2
SKA3-205ENST00000465471 SLC12A3P55017 1021 aa22.57■■□□□ 1.2
SKA3-205ENST00000465471 NUCB2P80303 420 aa22.57■■□□□ 1.2
SKA3-205ENST00000465471 CAPSQ13938 189 aa22.57■■□□□ 1.2
SKA3-205ENST00000465471 ZRSR1Q15695 479 aaKnown RBP22.57■■□□□ 1.2
SKA3-205ENST00000465471 IFNLR1Q8IU57 520 aaPredicted RBP22.57■■□□□ 1.2
SKA3-205ENST00000465471 SYT2Q8N9I0 419 aaPredicted RBP22.57■■□□□ 1.2
SKA3-205ENST00000465471 NLRP4Q96MN2 994 aa22.57■■□□□ 1.2
SKA3-205ENST00000465471 PLIN2Q99541 437 aa22.57■■□□□ 1.2
SKA3-205ENST00000465471 POLR3FQ9H1D9 316 aaPredicted RBP22.57■■□□□ 1.2
SKA3-205ENST00000465471 TSPYL2Q9H2G4 693 aaPredicted RBP22.57■■□□□ 1.2
SKA3-205ENST00000465471 GPRC5CQ9NQ84 441 aa22.57■■□□□ 1.2
SKA3-205ENST00000465471 BLOC1S4Q9NUP1 217 aa22.57■■□□□ 1.2
SKA3-205ENST00000465471 TTC3P53804 2025 aa22.57■■□□□ 1.2
SKA3-205ENST00000465471 TCHHQ07283 1943 aa22.57■■□□□ 1.2
SKA3-205ENST00000465471 GRXCR1A8MXD5 290 aa22.56■■□□□ 1.2
SKA3-205ENST00000465471 ANP32AP39687 249 aaKnown RBP22.56■■□□□ 1.2
SKA3-205ENST00000465471 AXDND1Q5T1B0 1012 aaPredicted RBP22.56■■□□□ 1.2
SKA3-205ENST00000465471 RINT1Q6NUQ1 792 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms