RNA–Protein interactions for RNA: ENST00000465223.1

NCSTN-210, Transcript of nicastrin, humanhuman

TSL 2

Gene NCSTN, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-210ENST00000465223 SMARCC2Q8TAQ2 1214 aa17.3■□□□□ 0.36
NCSTN-210ENST00000465223 HELQQ8TDG4 1101 aa17.3■□□□□ 0.36
NCSTN-210ENST00000465223 TMEM169Q96HH4 297 aa17.3■□□□□ 0.36
NCSTN-210ENST00000465223 MYADMQ96S97 322 aa17.3■□□□□ 0.36
NCSTN-210ENST00000465223 RIOX1Q9H6W3 641 aa17.3■□□□□ 0.36
NCSTN-210ENST00000465223 SPATA6Q9NWH7 488 aaPredicted RBP17.3■□□□□ 0.36
NCSTN-210ENST00000465223 IRAK3Q9Y616 596 aa17.3■□□□□ 0.36
NCSTN-210ENST00000465223 ZNF213O14771 459 aa17.29■□□□□ 0.36
NCSTN-210ENST00000465223 MX1P20591 662 aa17.29■□□□□ 0.36
NCSTN-210ENST00000465223 NMIQ13287 307 aaPredicted RBP17.29■□□□□ 0.36
NCSTN-210ENST00000465223 PTPN14Q15678 1187 aa17.29■□□□□ 0.36
NCSTN-210ENST00000465223 KIZQ2M2Z5 673 aa17.29■□□□□ 0.36
NCSTN-210ENST00000465223 FAM43BQ6ZT52 329 aaPredicted RBP17.29■□□□□ 0.36
NCSTN-210ENST00000465223 ECHDC2Q86YB7 292 aa17.29■□□□□ 0.36
NCSTN-210ENST00000465223 ATRIPQ8WXE1 791 aa17.29■□□□□ 0.36
NCSTN-210ENST00000465223 PIBF1Q8WXW3 757 aa17.29■□□□□ 0.36
NCSTN-210ENST00000465223 EVI5LQ96CN4 794 aa17.29■□□□□ 0.36
NCSTN-210ENST00000465223 AZI2Q9H6S1 392 aa17.29■□□□□ 0.36
NCSTN-210ENST00000465223 PNMA6FA0A0J9YX94 578 aa17.28■□□□□ 0.36
NCSTN-210ENST00000465223 LAMTOR5O43504 91 aa17.28■□□□□ 0.36
NCSTN-210ENST00000465223 ALDH7A1P49419 539 aaKnown RBP17.28■□□□□ 0.36
NCSTN-210ENST00000465223 DMWDQ09019 674 aa17.28■□□□□ 0.36
NCSTN-210ENST00000465223 TRAF1Q13077 416 aa17.28■□□□□ 0.36
NCSTN-210ENST00000465223 IFIT1BQ5T764 474 aaKnown RBP17.28■□□□□ 0.36
NCSTN-210ENST00000465223 BCL7CQ8WUZ0 217 aaPredicted RBP17.28■□□□□ 0.36
NCSTN-210ENST00000465223 EPC1Q9H2F5 836 aa17.28■□□□□ 0.36
NCSTN-210ENST00000465223 RNF39Q9H2S5 420 aa17.28■□□□□ 0.36
NCSTN-210ENST00000465223 FBXO4Q9UKT5 387 aa17.28■□□□□ 0.36
NCSTN-210ENST00000465223 PCDHGA2Q9Y5H1 932 aa17.28■□□□□ 0.36
NCSTN-210ENST00000465223 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.28■□□□□ 0.36
NCSTN-210ENST00000465223 FAM208BQ5VWN6 2430 aa17.28■□□□□ 0.36
NCSTN-210ENST00000465223 CLCN4P51793 760 aa17.27■□□□□ 0.36
NCSTN-210ENST00000465223 GIT2Q14161 759 aa17.27■□□□□ 0.36
NCSTN-210ENST00000465223 WTAPQ15007 396 aa17.27■□□□□ 0.36
NCSTN-210ENST00000465223 C15orf39Q6ZRI6 1047 aa17.27■□□□□ 0.36
NCSTN-210ENST00000465223 PPFIBP1Q86W92 1011 aa17.27■□□□□ 0.36
NCSTN-210ENST00000465223 ZBTB44Q8NCP5 570 aa17.27■□□□□ 0.36
NCSTN-210ENST00000465223 TNPO1Q92973 898 aaKnown RBP17.27■□□□□ 0.36
NCSTN-210ENST00000465223 COL26A1Q96A83 441 aa17.27■□□□□ 0.36
NCSTN-210ENST00000465223 CDHR1Q96JP9 859 aa17.27■□□□□ 0.36
NCSTN-210ENST00000465223 KLHL5Q96PQ7 755 aa17.27■□□□□ 0.36
NCSTN-210ENST00000465223 EPS15L1Q9UBC2 864 aa17.27■□□□□ 0.36
NCSTN-210ENST00000465223 MEIS2O14770 477 aa17.26■□□□□ 0.35
NCSTN-210ENST00000465223 SLC30A4O14863 429 aa17.26■□□□□ 0.35
NCSTN-210ENST00000465223 LILRB5O75023 590 aa17.26■□□□□ 0.35
NCSTN-210ENST00000465223 MYBP10242 640 aa17.26■□□□□ 0.35
NCSTN-210ENST00000465223 STAT5BP51692 787 aa17.26■□□□□ 0.35
NCSTN-210ENST00000465223 CRYBB1P53674 252 aaPredicted RBP17.26■□□□□ 0.35
NCSTN-210ENST00000465223 POLGP54098 1239 aaPredicted RBP17.26■□□□□ 0.35
NCSTN-210ENST00000465223 STARD6P59095 220 aa17.26■□□□□ 0.35
NCSTN-210ENST00000465223 SPEM2Q0P670 501 aa17.26■□□□□ 0.35
NCSTN-210ENST00000465223 MTMR1Q13613 665 aa17.26■□□□□ 0.35
NCSTN-210ENST00000465223 TSSK4Q6SA08 328 aa17.26■□□□□ 0.35
NCSTN-210ENST00000465223 PLPPR4Q7Z2D5 763 aa17.26■□□□□ 0.35
NCSTN-210ENST00000465223 DDX53Q86TM3 631 aaKnown RBP17.26■□□□□ 0.35
NCSTN-210ENST00000465223 BORCS6Q96GS4 357 aa17.26■□□□□ 0.35
NCSTN-210ENST00000465223 UBAC1Q9BSL1 405 aa17.26■□□□□ 0.35
NCSTN-210ENST00000465223 VN1R3Q9BXE9 311 aa17.26■□□□□ 0.35
NCSTN-210ENST00000465223 JPH1Q9HDC5 661 aaPredicted RBP17.26■□□□□ 0.35
NCSTN-210ENST00000465223 ZSCAN32Q9NX65 697 aa17.26■□□□□ 0.35
NCSTN-210ENST00000465223 SLC9A2Q9UBY0 812 aa17.26■□□□□ 0.35
NCSTN-210ENST00000465223 MTF2Q9Y483 593 aaPredicted RBP17.26■□□□□ 0.35
NCSTN-210ENST00000465223 UBIAD1Q9Y5Z9 338 aa17.26■□□□□ 0.35
NCSTN-210ENST00000465223 MYH15Q9Y2K3 1946 aa17.25■□□□□ 0.35
NCSTN-210ENST00000465223 SALL3Q9BXA9 1300 aa17.25■□□□□ 0.35
NCSTN-210ENST00000465223 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.25■□□□□ 0.35
NCSTN-210ENST00000465223 ZC3H11AO75152 810 aaKnown RBP eCLIP17.25■□□□□ 0.35
NCSTN-210ENST00000465223 VTNP04004 478 aa17.25■□□□□ 0.35
NCSTN-210ENST00000465223 KLRC2P26717 231 aa17.25■□□□□ 0.35
NCSTN-210ENST00000465223 GRM4Q14833 912 aa17.25■□□□□ 0.35
NCSTN-210ENST00000465223 SEC23AQ15436 765 aa17.25■□□□□ 0.35
NCSTN-210ENST00000465223 C20orf194Q5TEA3 1177 aa17.25■□□□□ 0.35
NCSTN-210ENST00000465223 CUL5Q93034 780 aa17.25■□□□□ 0.35
NCSTN-210ENST00000465223 IGSF21Q96ID5 467 aa17.25■□□□□ 0.35
NCSTN-210ENST00000465223 BCO2Q9BYV7 579 aa17.25■□□□□ 0.35
NCSTN-210ENST00000465223 WDR6Q9NNW5 1121 aaKnown RBP17.25■□□□□ 0.35
NCSTN-210ENST00000465223 GMEB2Q9UKD1 530 aa17.25■□□□□ 0.35
NCSTN-210ENST00000465223 ANGPTL2Q9UKU9 493 aa17.25■□□□□ 0.35
NCSTN-210ENST00000465223 CLUHO75153 1309 aa17.24■□□□□ 0.35
NCSTN-210ENST00000465223 CCDC195A0A1B0GUA6 201 aa17.24■□□□□ 0.35
NCSTN-210ENST00000465223 GPR32O75388 356 aa17.24■□□□□ 0.35
NCSTN-210ENST00000465223 SSBP05455 408 aaKnown RBP eCLIP17.24■□□□□ 0.35
NCSTN-210ENST00000465223 ZSCAN20P17040 1043 aaPredicted RBP17.24■□□□□ 0.35
NCSTN-210ENST00000465223 ACTR2P61160 394 aa17.24■□□□□ 0.35
NCSTN-210ENST00000465223 LPAL2Q16609 132 aa17.24■□□□□ 0.35
NCSTN-210ENST00000465223 NETO1Q8TDF5 533 aa17.24■□□□□ 0.35
NCSTN-210ENST00000465223 NXPE3Q969Y0 559 aa17.24■□□□□ 0.35
NCSTN-210ENST00000465223 MAN1C1Q9NR34 630 aa17.24■□□□□ 0.35
NCSTN-210ENST00000465223 SLC2A4RGQ9NR83 387 aa17.24■□□□□ 0.35
NCSTN-210ENST00000465223 CNPP09543 421 aaKnown RBP17.23■□□□□ 0.35
NCSTN-210ENST00000465223 NT5C2P49902 561 aa17.23■□□□□ 0.35
NCSTN-210ENST00000465223 SNW1Q13573 536 aaKnown RBP17.23■□□□□ 0.35
NCSTN-210ENST00000465223 ZNF598Q86UK7 904 aaKnown RBP17.23■□□□□ 0.35
NCSTN-210ENST00000465223 BBXQ8WY36 941 aaPredicted RBP17.23■□□□□ 0.35
NCSTN-210ENST00000465223 STAMQ92783 540 aa17.23■□□□□ 0.35
NCSTN-210ENST00000465223 NELL1Q92832 810 aa17.23■□□□□ 0.35
NCSTN-210ENST00000465223 RPP25Q9BUL9 199 aaKnown RBP17.23■□□□□ 0.35
NCSTN-210ENST00000465223 MRPL9Q9BYD2 267 aaKnown RBP17.23■□□□□ 0.35
NCSTN-210ENST00000465223 JADE2Q9NQC1 790 aa17.23■□□□□ 0.35
NCSTN-210ENST00000465223 NUMBLQ9Y6R0 609 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms