RNA–Protein interactions for RNA: ENST00000464628.1

SCAF8-205, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 5

Gene SCAF8, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-205ENST00000464628 RRN3P2A6NIE6 340 aa13.13□□□□□ -0.31
SCAF8-205ENST00000464628 NT5C1B-RDH14C9J2C7 533 aa13.13□□□□□ -0.31
SCAF8-205ENST00000464628 ANHXE9PGG2 379 aa13.13□□□□□ -0.31
SCAF8-205ENST00000464628 TAF4O00268 1085 aa13.13□□□□□ -0.31
SCAF8-205ENST00000464628 METAP2P50579 478 aaKnown RBP eCLIP13.13□□□□□ -0.31
SCAF8-205ENST00000464628 CLCN4P51793 760 aa13.13□□□□□ -0.31
SCAF8-205ENST00000464628 CSRP2Q16527 193 aa13.13□□□□□ -0.31
SCAF8-205ENST00000464628 LPAL2Q16609 132 aa13.13□□□□□ -0.31
SCAF8-205ENST00000464628 CLLU1OSQ5K130 101 aa13.13□□□□□ -0.31
SCAF8-205ENST00000464628 CMASQ8NFW8 434 aaPredicted RBP13.13□□□□□ -0.31
SCAF8-205ENST00000464628 OSBPL6Q9BZF3 934 aa13.13□□□□□ -0.31
SCAF8-205ENST00000464628 RTEL1Q9NZ71 1219 aa13.13□□□□□ -0.31
SCAF8-205ENST00000464628 LHX6Q9UPM6 363 aa13.13□□□□□ -0.31
SCAF8-205ENST00000464628 SMIM35A0A1B0GVV1 85 aa13.12□□□□□ -0.31
SCAF8-205ENST00000464628 SRRM3A6NNA2 597 aaPredicted RBP13.12□□□□□ -0.31
SCAF8-205ENST00000464628 HMMRO75330 724 aa13.12□□□□□ -0.31
SCAF8-205ENST00000464628 RETP07949 1114 aa13.12□□□□□ -0.31
SCAF8-205ENST00000464628 MAGEA9P43362 315 aa13.12□□□□□ -0.31
SCAF8-205ENST00000464628 GIT2Q14161 759 aa13.12□□□□□ -0.31
SCAF8-205ENST00000464628 ASPRV1Q53RT3 343 aa13.12□□□□□ -0.31
SCAF8-205ENST00000464628 FAM228AQ86W67 206 aa13.12□□□□□ -0.31
SCAF8-205ENST00000464628 PPFIBP1Q86W92 1011 aa13.12□□□□□ -0.31
SCAF8-205ENST00000464628 FCHSD1Q86WN1 690 aa13.12□□□□□ -0.31
SCAF8-205ENST00000464628 PNMA1Q8ND90 353 aa13.12□□□□□ -0.31
SCAF8-205ENST00000464628 BCL7CQ8WUZ0 217 aaPredicted RBP13.12□□□□□ -0.31
SCAF8-205ENST00000464628 BBXQ8WY36 941 aaPredicted RBP13.12□□□□□ -0.31
SCAF8-205ENST00000464628 MTMR8Q96EF0 704 aa13.12□□□□□ -0.31
SCAF8-205ENST00000464628 PCYT2Q99447 389 aa13.12□□□□□ -0.31
SCAF8-205ENST00000464628 RHOBTB2Q9BYZ6 727 aa13.12□□□□□ -0.31
SCAF8-205ENST00000464628 VAT1LQ9HCJ6 419 aa13.12□□□□□ -0.31
SCAF8-205ENST00000464628 NUMBLQ9Y6R0 609 aa13.12□□□□□ -0.31
SCAF8-205ENST00000464628 COL4A2P08572 1712 aa13.12□□□□□ -0.31
SCAF8-205ENST00000464628 FLNBO75369 2602 aaKnown RBP13.12□□□□□ -0.31
SCAF8-205ENST00000464628 MAST4O15021 2626 aa13.11□□□□□ -0.31
SCAF8-205ENST00000464628 DMXL2Q8TDJ6 3036 aa13.11□□□□□ -0.31
SCAF8-205ENST00000464628 HOXA2O43364 376 aa13.11□□□□□ -0.31
SCAF8-205ENST00000464628 ATP9AO75110 1047 aa13.11□□□□□ -0.31
SCAF8-205ENST00000464628 KCNA2P16389 499 aa13.11□□□□□ -0.31
SCAF8-205ENST00000464628 BCAR1P56945 870 aa13.11□□□□□ -0.31
SCAF8-205ENST00000464628 PLCB4Q15147 1175 aa13.11□□□□□ -0.31
SCAF8-205ENST00000464628 NME8Q8N427 588 aa13.11□□□□□ -0.31
SCAF8-205ENST00000464628 SEPT1Q8WYJ6 367 aa13.11□□□□□ -0.31
SCAF8-205ENST00000464628 TMEM169Q96HH4 297 aa13.11□□□□□ -0.31
SCAF8-205ENST00000464628 SHDQ96IW2 340 aa13.11□□□□□ -0.31
SCAF8-205ENST00000464628 ZKSCAN3Q9BRR0 538 aa13.11□□□□□ -0.31
SCAF8-205ENST00000464628 VN1R3Q9BXE9 311 aa13.11□□□□□ -0.31
SCAF8-205ENST00000464628 LRRCC1Q9C099 1032 aa13.11□□□□□ -0.31
SCAF8-205ENST00000464628 SMARCAD1Q9H4L7 1026 aa13.11□□□□□ -0.31
SCAF8-205ENST00000464628 LTB4R2Q9NPC1 389 aa13.11□□□□□ -0.31
SCAF8-205ENST00000464628 ADAMTS20P59510 1910 aa13.1□□□□□ -0.31
SCAF8-205ENST00000464628 GCOM1H8Y6P7 765 aaPredicted RBP13.1□□□□□ -0.31
SCAF8-205ENST00000464628 DHX16O60231 1041 aaKnown RBP13.1□□□□□ -0.31
SCAF8-205ENST00000464628 PAPLNO95428 1278 aa13.1□□□□□ -0.31
SCAF8-205ENST00000464628 POLR2MP0CAP2 368 aa13.1□□□□□ -0.31
SCAF8-205ENST00000464628 LAMP2P13473 410 aa13.1□□□□□ -0.31
SCAF8-205ENST00000464628 LIMK1P53667 647 aa13.1□□□□□ -0.31
SCAF8-205ENST00000464628 POLGP54098 1239 aaPredicted RBP13.1□□□□□ -0.31
SCAF8-205ENST00000464628 SNW1Q13573 536 aaKnown RBP13.1□□□□□ -0.31
SCAF8-205ENST00000464628 BMS1Q14692 1282 aaKnown RBP13.1□□□□□ -0.31
SCAF8-205ENST00000464628 UBXN2BQ14CS0 331 aa13.1□□□□□ -0.31
SCAF8-205ENST00000464628 ALX1Q15699 326 aa13.1□□□□□ -0.31
SCAF8-205ENST00000464628 MLF2Q15773 248 aaPredicted RBP13.1□□□□□ -0.31
SCAF8-205ENST00000464628 DGKHQ86XP1 1220 aa13.1□□□□□ -0.31
SCAF8-205ENST00000464628 ST13P5Q8NFI4 369 aaPredicted RBP13.1□□□□□ -0.31
SCAF8-205ENST00000464628 STAMQ92783 540 aa13.1□□□□□ -0.31
SCAF8-205ENST00000464628 CLDN23Q96B33 292 aa13.1□□□□□ -0.31
SCAF8-205ENST00000464628 KLHL5Q96PQ7 755 aa13.1□□□□□ -0.31
SCAF8-205ENST00000464628 RPP25Q9BUL9 199 aaKnown RBP13.1□□□□□ -0.31
SCAF8-205ENST00000464628 FAM126AQ9BYI3 521 aaPredicted RBP13.1□□□□□ -0.31
SCAF8-205ENST00000464628 WASF3Q9UPY6 502 aa13.1□□□□□ -0.31
SCAF8-205ENST00000464628 GINS2Q9Y248 185 aa13.1□□□□□ -0.31
SCAF8-205ENST00000464628 SPDYE4A6NLX3 237 aa13.09□□□□□ -0.31
SCAF8-205ENST00000464628 GPR182O15218 404 aa13.09□□□□□ -0.31
SCAF8-205ENST00000464628 TARSP26639 723 aaKnown RBP13.09□□□□□ -0.31
SCAF8-205ENST00000464628 GPC5P78333 572 aa13.09□□□□□ -0.31
SCAF8-205ENST00000464628 PRKCQQ04759 706 aa13.09□□□□□ -0.31
SCAF8-205ENST00000464628 IL31Q6EBC2 164 aa13.09□□□□□ -0.31
SCAF8-205ENST00000464628 MTHFD1LQ6UB35 978 aa13.09□□□□□ -0.31
SCAF8-205ENST00000464628 DDX53Q86TM3 631 aaKnown RBP13.09□□□□□ -0.31
SCAF8-205ENST00000464628 ABI1Q8IZP0 508 aa13.09□□□□□ -0.31
SCAF8-205ENST00000464628 TMEM87AQ8NBN3 555 aa13.09□□□□□ -0.31
SCAF8-205ENST00000464628 MAN1C1Q9NR34 630 aa13.09□□□□□ -0.31
SCAF8-205ENST00000464628 NEDD4P46934 1319 aa13.09□□□□□ -0.31
SCAF8-205ENST00000464628 DOCK6Q96HP0 2047 aa13.08□□□□□ -0.31
SCAF8-205ENST00000464628 TMEM8BA6NDV4 472 aa13.08□□□□□ -0.32
SCAF8-205ENST00000464628 FAM170BA6NMN3 283 aa13.08□□□□□ -0.32
SCAF8-205ENST00000464628 ZBTB5O15062 677 aa13.08□□□□□ -0.32
SCAF8-205ENST00000464628 LILRB3O75022 631 aa13.08□□□□□ -0.32
SCAF8-205ENST00000464628 CNPP09543 421 aaKnown RBP13.08□□□□□ -0.32
SCAF8-205ENST00000464628 NCLP19338 710 aaKnown RBP13.08□□□□□ -0.32
SCAF8-205ENST00000464628 FZD5Q13467 585 aa13.08□□□□□ -0.32
SCAF8-205ENST00000464628 SLC35G1Q2M3R5 365 aa13.08□□□□□ -0.32
SCAF8-205ENST00000464628 ODR4Q5SWX8 454 aa13.08□□□□□ -0.32
SCAF8-205ENST00000464628 ZNF598Q86UK7 904 aaKnown RBP13.08□□□□□ -0.32
SCAF8-205ENST00000464628 ECHDC2Q86YB7 292 aa13.08□□□□□ -0.32
SCAF8-205ENST00000464628 TBC1D10CQ8IV04 446 aa13.08□□□□□ -0.32
SCAF8-205ENST00000464628 STAG2Q8N3U4 1231 aa13.08□□□□□ -0.32
SCAF8-205ENST00000464628 CELF5Q8N6W0 485 aaKnown RBP13.08□□□□□ -0.32
SCAF8-205ENST00000464628 GIMAP8Q8ND71 665 aaPredicted RBP13.08□□□□□ -0.32
SCAF8-205ENST00000464628 HELQQ8TDG4 1101 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms